Gene annotation
Transcriptome id Sobic.005G116100.1
Synonym Sb05g016800
Functional annotation expressed protein
UniProt C5Y2F8
Pfam -
Panther DB PTHR36763
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G27050 : -
RAP-DB (Rice) LOC_Os11g29700.2 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley HORVU3Hr1G005490.1 , HORVU3Hr1G005490.3 , HORVU3Hr1G005490.2 , HORVU3Hr1G005490.5 , HORVU3Hr1G005490.4 , HORVU3Hr1G005490.7 , HORVU3Hr1G005490.6 , HORVU3Hr1G005490.9 , HORVU3Hr1G005490.8 , HORVU3Hr1G005490.10
Wheat TraesCS3D02G017500 , TraesCS3B02G018600 , TraesCS3A02G028400
Populus -


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cDNA sequences
Sobic.005G116100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G054300 amidohydrolase family protein, expressed -
2 Sobic.009G030900 bundle sheath defective protein 2, putative, expressed -
3 Sobic.005G123200 cbbY, putative, expressed -
4 Sobic.002G274200 expressed protein -
5 Sobic.002G152700 rhodanese-like, putative, expressed -
6 Sobic.009G125400 FZL, putative, expressed -
7 Sobic.002G299900 expressed protein -
8 Sobic.008G021300 Unnamed(PubMedID : 24676859)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@FHA domain containing protein, putative, expressed -
9 Sobic.010G005500 ferredoxin--NADP reductase, chloroplast precursor, putative, expressed K02641: ferredoxin--NADP+ reductase
10 Sobic.001G527000 PsbP-like protein 1 (At)(PubMedID : 27208977)@Photosystem I subunit P-like protein(PubMedID : 29017446)@PsbP, putative, expressed K02717: photosystem II oxygen-evolving enhancer protein 2
11 Sobic.001G069000 ribose-5-phosphate isomerase A, putative, expressed K01807: ribose 5-phosphate isomerase A
12 Sobic.004G274100 expressed protein -
13 Sobic.001G029100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
14 Sobic.006G272900 peroxidase activity(PubMedID : 29491869)@glutathione peroxidase, putative, expressed K00432: gpx, btuE, glutathione peroxidase
15 Sobic.001G415400 PsbP, putative, expressed -
16 Sobic.006G067400 Ser/Thr protein phosphatase family protein, putative, expressed -
17 Sobic.004G175500 OsAPx8 - Thylakoid-bound Ascorbate Peroxidase encoding gene 5,8, expressed K00434: L-ascorbate peroxidase
18 Sobic.008G171300 methyltransferase domain containing protein, putative, expressed K12502: VTE3, MPBQ/MSBQ methyltransferase
19 Sobic.009G183700 XP_002441313.1 plastidic phosphoglycerate kinase(PubMedID : 26904072)@phosphoglycerate kinase(PubMedID : 29017446)@phosphoglycerate kinase protein, putative, expressed K00927: PGK, phosphoglycerate kinase
20 Sobic.004G183100 pentatricopeptide repeat domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic005G116100 Sobic005G116100 Sobic006G054300 Sobic006G054300 Sobic005G116100--Sobic006G054300 Sobic009G030900 Sobic009G030900 Sobic005G116100--Sobic009G030900 Sobic005G123200 Sobic005G123200 Sobic005G116100--Sobic005G123200 Sobic002G274200 Sobic002G274200 Sobic005G116100--Sobic002G274200 Sobic002G152700 Sobic002G152700 Sobic005G116100--Sobic002G152700 Sobic009G125400 Sobic009G125400 Sobic005G116100--Sobic009G125400 Sobic002G299900 Sobic002G299900 Sobic005G116100--Sobic002G299900 Sobic008G021300 Sobic008G021300 Sobic005G116100--Sobic008G021300 Sobic010G005500 Sobic010G005500 Sobic005G116100--Sobic010G005500 Sobic006G054300--Sobic005G116100 Sobic008G078400 Sobic008G078400 Sobic006G054300--Sobic008G078400 Sobic006G054300--Sobic009G030900 Sobic004G343900 Sobic004G343900 Sobic006G054300--Sobic004G343900 Sobic007G143700 Sobic007G143700 Sobic006G054300--Sobic007G143700 Sobic006G054300--Sobic002G274200 Sobic001G104800 Sobic001G104800 Sobic006G054300--Sobic001G104800 Sobic006G054300--Sobic005G123200 Sobic003G157400 Sobic003G157400 Sobic006G054300--Sobic003G157400 Sobic009G030900--Sobic010G005500 Sobic010G277600 Sobic010G277600 Sobic009G030900--Sobic010G277600 Sobic007G052400 Sobic007G052400 Sobic009G030900--Sobic007G052400 Sobic009G183700 Sobic009G183700 Sobic009G030900--Sobic009G183700 Sobic003G387800 Sobic003G387800 Sobic009G030900--Sobic003G387800 Sobic009G059300 Sobic009G059300 Sobic009G030900--Sobic009G059300 Sobic003G002300 Sobic003G002300 Sobic009G030900--Sobic003G002300 Sobic008G171300 Sobic008G171300 Sobic009G030900--Sobic008G171300 Sobic004G175500 Sobic004G175500 Sobic009G030900--Sobic004G175500 Sobic001G527000 Sobic001G527000 Sobic005G123200--Sobic001G527000 Sobic004G239100 Sobic004G239100 Sobic005G123200--Sobic004G239100 Sobic005G123200--Sobic009G030900 Sobic005G123200--Sobic009G183700 Sobic005G123200--Sobic010G277600 Sobic005G194100 Sobic005G194100 Sobic005G123200--Sobic005G194100 Sobic009G043000 Sobic009G043000 Sobic005G123200--Sobic009G043000 Sobic008G102000 Sobic008G102000 Sobic005G123200--Sobic008G102000 Sobic005G123200--Sobic002G152700 Sobic005G110400 Sobic005G110400 Sobic002G274200--Sobic005G110400 Sobic002G272100 Sobic002G272100 Sobic002G274200--Sobic002G272100 Sobic006G021600 Sobic006G021600 Sobic002G274200--Sobic006G021600 Sobic008G073100 Sobic008G073100 Sobic002G274200--Sobic008G073100 Sobic002G405100 Sobic002G405100 Sobic002G274200--Sobic002G405100 Sobic003G077400 Sobic003G077400 Sobic002G274200--Sobic003G077400 Sobic001G368500 Sobic001G368500 Sobic002G274200--Sobic001G368500 Sobic005G143500 Sobic005G143500 Sobic002G274200--Sobic005G143500 Sobic002G401800 Sobic002G401800 Sobic002G274200--Sobic002G401800 Sobic002G152700--Sobic008G021300 Sobic002G152700--Sobic001G527000 Sobic002G033800 Sobic002G033800 Sobic002G152700--Sobic002G033800 Sobic003G303700 Sobic003G303700 Sobic002G152700--Sobic003G303700 Sobic002G152700--Sobic010G005500 Sobic006G272900 Sobic006G272900 Sobic002G152700--Sobic006G272900 Sobic004G343300 Sobic004G343300 Sobic002G152700--Sobic004G343300 Sobic002G152700--Sobic009G030900 Sobic003G132100 Sobic003G132100 Sobic002G152700--Sobic003G132100 Sobic001G069000 Sobic001G069000 Sobic009G125400--Sobic001G069000 Sobic004G308700 Sobic004G308700 Sobic009G125400--Sobic004G308700 Sobic004G272100 Sobic004G272100 Sobic009G125400--Sobic004G272100 Sobic007G004800 Sobic007G004800 Sobic009G125400--Sobic007G004800 Sobic009G125400--Sobic008G021300 Sobic007G009200 Sobic007G009200 Sobic009G125400--Sobic007G009200 Sobic001G102800 Sobic001G102800 Sobic009G125400--Sobic001G102800 Sobic010G201700 Sobic010G201700 Sobic009G125400--Sobic010G201700 Sobic009G125400--Sobic006G272900 Sobic007G205500 Sobic007G205500 Sobic002G299900--Sobic007G205500 Sobic001G314200 Sobic001G314200 Sobic002G299900--Sobic001G314200 Sobic006G067400 Sobic006G067400 Sobic002G299900--Sobic006G067400 Sobic002G299900--Sobic005G116100 Sobic002G299900--Sobic008G171300 Sobic002G299900--Sobic004G343900 Sobic002G299900--Sobic005G194100 Sobic002G299900--Sobic006G054300 Sobic004G020300 Sobic004G020300 Sobic002G299900--Sobic004G020300 Sobic008G021300--Sobic003G303700 Sobic008G021300--Sobic002G152700 Sobic008G021300--Sobic007G004800 Sobic008G021300--Sobic006G272900 Sobic004G035500 Sobic004G035500 Sobic008G021300--Sobic004G035500 Sobic008G021300--Sobic010G201700 Sobic001G519800 Sobic001G519800 Sobic008G021300--Sobic001G519800 Sobic008G021300--Sobic001G102800 Sobic008G021300--Sobic009G043000 Sobic010G005500--Sobic007G052400 Sobic010G005500--Sobic003G002300 Sobic010G005500--Sobic009G030900 Sobic010G005500--Sobic009G183700 Sobic002G277100 Sobic002G277100 Sobic010G005500--Sobic002G277100 Sobic010G005500--Sobic003G387800 Sobic004G012900 Sobic004G012900 Sobic010G005500--Sobic004G012900 Sobic010G005500--Sobic010G277600 Sobic010G005500--Sobic009G059300
Octagon: transcription factors


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