Gene annotation
Transcriptome id Sobic.004G237200.1
Synonym HVA22A, ATHVA22A, Sb04g027950
Functional annotation similar to Putative uncharacterized protein (PubMedID : 29862293)
HVA22, putative, expressed
UniProt C5XYS6
Pfam PF03134
Panther DB PTHR12300 PTHR12300:SF53
NCBI CDD KOG1725; Protein involved in membrane traffic (YOP1/TB2/DP1/HVA22 family)
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G74520 : HVA22 homologue A
RAP-DB (Rice) LOC_Os02g51290.1 : HVA22, putative, expressed
MaizeGDB (Corn) Zm00025a022095 , Zm00025a022040
Brachypodium KQK01933 , KQJ87908 , PNT69636
Barley HORVU6Hr1G075630.3 , HORVU6Hr1G075630.2 , HORVU6Hr1G075630.1 , HORVU6Hr1G075630.7 , HORVU6Hr1G075630.6 , HORVU6Hr1G075630.5 , HORVU6Hr1G075630.4 , HORVU6Hr1G075630.9 , HORVU6Hr1G075630.8 , HORVU6Hr1G075630.11 , HORVU6Hr1G075630.10
Wheat TraesCS4A02G173900 , TraesCS4D02G141600
Populus -


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cDNA sequences
Sobic.004G237200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G154000 zinc finger protein, putative, expressed K11979: E3 ubiquitin-protein ligase UBR7
2 Sobic.003G242900 viral A-type inclusion protein repeat containing protein, expressed -
3 Sobic.010G015900 transcriptional corepressor SEUSS, putative, expressed -
4 Sobic.003G040200 expressed protein -
5 Sobic.008G125900 drought induced 19 protein, putative, expressed -
6 Sobic.007G042300 expressed protein -
7 Sobic.007G195600 expressed protein -
8 Sobic.008G042700 E2F family transcription factor protein, putative, expressed K06620: transcription factor E2F3
9 Sobic.003G382100 PHD finger protein, putative, expressed -
10 Sobic.009G217300 anaphase-promoting complex subunit 10, putative, expressed K03357: APC10, anaphase-promoting complex subunit 10
11 Sobic.006G179600 RWP-RK domain-containing protein, putative, expressed -
12 Sobic.010G021200 GAGA-binding protein, putative, expressed -
13 Sobic.005G021700 EMB1379, putative, expressed -
14 Sobic.004G006600 transcription factor jumonji, putative, expressed K15601: [histone H3]-dimethyl-L-lysine9 demethylase
15 Sobic.004G250600 NHL repeat-containing protein, putative, expressed -
16 Sobic.002G403200 ankyrin repeat domain containing protein, putative, expressed -
17 Sobic.008G179800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@GATA zinc finger domain containing protein, expressed -
18 Sobic.003G159500 zinc finger, C3HC4 type domain containing protein, expressed -
19 Sobic.003G217500 expressed protein -
20 Sobic.001G478500 expressed protein -


Gene co-expression network
sample Sobic004G237200 Sobic004G237200 Sobic010G154000 Sobic010G154000 Sobic004G237200--Sobic010G154000 Sobic003G242900 Sobic003G242900 Sobic004G237200--Sobic003G242900 Sobic010G015900 Sobic010G015900 Sobic004G237200--Sobic010G015900 Sobic003G040200 Sobic003G040200 Sobic004G237200--Sobic003G040200 Sobic008G125900 Sobic008G125900 Sobic004G237200--Sobic008G125900 Sobic007G042300 Sobic007G042300 Sobic004G237200--Sobic007G042300 Sobic007G195600 Sobic007G195600 Sobic004G237200--Sobic007G195600 Sobic008G042700 Sobic008G042700 Sobic004G237200--Sobic008G042700 Sobic003G382100 Sobic003G382100 Sobic004G237200--Sobic003G382100 Sobic004G320100 Sobic004G320100 Sobic010G154000--Sobic004G320100 Sobic006G120800 Sobic006G120800 Sobic010G154000--Sobic006G120800 Sobic001G507400 Sobic001G507400 Sobic010G154000--Sobic001G507400 Sobic006G049100 Sobic006G049100 Sobic010G154000--Sobic006G049100 Sobic001G487100 Sobic001G487100 Sobic010G154000--Sobic001G487100 Sobic006G245700 Sobic006G245700 Sobic010G154000--Sobic006G245700 Sobic003G221500 Sobic003G221500 Sobic010G154000--Sobic003G221500 Sobic009G258400 Sobic009G258400 Sobic010G154000--Sobic009G258400 Sobic004G212700 Sobic004G212700 Sobic010G154000--Sobic004G212700 Sobic003G242900--Sobic003G040200 Sobic003G242900--Sobic004G237200 Sobic006G019300 Sobic006G019300 Sobic003G242900--Sobic006G019300 Sobic003G242900--Sobic010G015900 Sobic002G105700 Sobic002G105700 Sobic003G242900--Sobic002G105700 Sobic004G243600 Sobic004G243600 Sobic003G242900--Sobic004G243600 Sobic001G478500 Sobic001G478500 Sobic003G242900--Sobic001G478500 Sobic003G242900--Sobic007G042300 Sobic003G242900--Sobic008G125900 Sobic010G015900--Sobic007G042300 Sobic001G480550 Sobic001G480550 Sobic010G015900--Sobic001G480550 Sobic001G039500 Sobic001G039500 Sobic010G015900--Sobic001G039500 Sobic010G021200 Sobic010G021200 Sobic010G015900--Sobic010G021200 Sobic002G029100 Sobic002G029100 Sobic010G015900--Sobic002G029100 Sobic001G501800 Sobic001G501800 Sobic010G015900--Sobic001G501800 Sobic010G015900--Sobic010G154000 Sobic003G159500 Sobic003G159500 Sobic010G015900--Sobic003G159500 Sobic002G272250 Sobic002G272250 Sobic010G015900--Sobic002G272250 Sobic003G040200--Sobic006G019300 Sobic007G223000 Sobic007G223000 Sobic003G040200--Sobic007G223000 Sobic010G132600 Sobic010G132600 Sobic003G040200--Sobic010G132600 Sobic003G040200--Sobic004G243600 Sobic006G269700 Sobic006G269700 Sobic003G040200--Sobic006G269700 Sobic007G099200 Sobic007G099200 Sobic003G040200--Sobic007G099200 Sobic010G220500 Sobic010G220500 Sobic003G040200--Sobic010G220500 Sobic007G217600 Sobic007G217600 Sobic003G040200--Sobic007G217600 Sobic008G054000 Sobic008G054000 Sobic003G040200--Sobic008G054000 Sobic008G125900--Sobic004G212700 Sobic008G125900--Sobic010G015900 Sobic001G119900 Sobic001G119900 Sobic008G125900--Sobic001G119900 Sobic002G202000 Sobic002G202000 Sobic008G125900--Sobic002G202000 Sobic008G125900--Sobic003G040200 Sobic008G125900--Sobic004G237200 Sobic008G125900--Sobic010G154000 Sobic009G155250 Sobic009G155250 Sobic008G125900--Sobic009G155250 Sobic003G113800 Sobic003G113800 Sobic008G125900--Sobic003G113800 Sobic007G042300--Sobic010G015900 Sobic006G061100 Sobic006G061100 Sobic007G042300--Sobic006G061100 Sobic007G042300--Sobic003G159500 Sobic009G239900 Sobic009G239900 Sobic007G042300--Sobic009G239900 Sobic004G075700 Sobic004G075700 Sobic007G042300--Sobic004G075700 Sobic007G042300--Sobic001G480550 Sobic006G179600 Sobic006G179600 Sobic007G042300--Sobic006G179600 Sobic001G423300 Sobic001G423300 Sobic007G042300--Sobic001G423300 Sobic009G113100 Sobic009G113100 Sobic007G042300--Sobic009G113100 Sobic001G005800 Sobic001G005800 Sobic007G195600--Sobic001G005800 Sobic002G253900 Sobic002G253900 Sobic007G195600--Sobic002G253900 Sobic004G272900 Sobic004G272900 Sobic007G195600--Sobic004G272900 Sobic003G345000 Sobic003G345000 Sobic007G195600--Sobic003G345000 Sobic006G218900 Sobic006G218900 Sobic007G195600--Sobic006G218900 Sobic001G123100 Sobic001G123100 Sobic007G195600--Sobic001G123100 Sobic009G148000 Sobic009G148000 Sobic007G195600--Sobic009G148000 Sobic010G177100 Sobic010G177100 Sobic007G195600--Sobic010G177100 Sobic002G335500 Sobic002G335500 Sobic007G195600--Sobic002G335500 Sobic008G042700--Sobic010G154000 Sobic010G236200 Sobic010G236200 Sobic008G042700--Sobic010G236200 Sobic008G042700--Sobic001G005800 Sobic008G042700--Sobic004G272900 Sobic001G157600 Sobic001G157600 Sobic008G042700--Sobic001G157600 Sobic009G006900 Sobic009G006900 Sobic008G042700--Sobic009G006900 Sobic003G026900 Sobic003G026900 Sobic008G042700--Sobic003G026900 Sobic008G045800 Sobic008G045800 Sobic008G042700--Sobic008G045800 Sobic003G224700 Sobic003G224700 Sobic008G042700--Sobic003G224700 Sobic003G382100--Sobic009G006900 Sobic003G274400 Sobic003G274400 Sobic003G382100--Sobic003G274400 Sobic006G272800 Sobic006G272800 Sobic003G382100--Sobic006G272800 Sobic001G468000 Sobic001G468000 Sobic003G382100--Sobic001G468000 Sobic002G196500 Sobic002G196500 Sobic003G382100--Sobic002G196500 Sobic005G032600 Sobic005G032600 Sobic003G382100--Sobic005G032600 Sobic009G087700 Sobic009G087700 Sobic003G382100--Sobic009G087700 Sobic002G374200 Sobic002G374200 Sobic003G382100--Sobic002G374200 Sobic005G062600 Sobic005G062600 Sobic003G382100--Sobic005G062600
Octagon: transcription factors


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