Gene annotation
Transcriptome id Sobic.004G355200.1
Synonym Sb04g038170
Functional annotation jmjC domain containing protein, expressed
UniProt A0A194YT50
Pfam PF10497 PF02373
Panther DB PTHR12549 PTHR12549:SF15
NCBI CDD -
KEGG Orthology K15601; [histone H3]-dimethyl-L-lysine9 demethylase
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G62310 : transcription factor jumonji (jmjC) domain-containing protein
RAP-DB (Rice) LOC_Os02g58210.2 : jmjC domain containing protein, expressed
MaizeGDB (Corn) Zm00025a032720 , Zm00025a007188
Brachypodium PNT64314 , PNT64315 , PNT64316
Barley -
Wheat TraesCS1B02G124400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G134300 - K17613: calcineurin-binding protein cabin-1
2 Sobic.004G107200 ubiquitin carboxyl-terminal hydrolase family protein, expressed K11855: ubiquitin carboxyl-terminal hydrolase 36/42
3 Sobic.001G090800 PHD finger family protein, putative, expressed -
4 Sobic.007G029200 myosin heavy chain-related, putative, expressed -
5 Sobic.001G352900 intron-binding protein aquarius, putative, expressed K12874: intron-binding protein aquarius
6 Sobic.010G065300 expressed protein K11643: CHD4, chromodomain-helicase-DNA-binding protein 4
7 Sobic.010G001100 chromo domain containing protein, expressed -
8 Sobic.006G210000 zinc finger domain, LSD1 subclass family protein, expressed -
9 Sobic.009G142000 plus-3 domain containing protein, putative, expressed -
10 Sobic.002G148400 histone-lysine N-methyltransferase, H3 lysine-4 specific ATX1, putative, expressed -
11 Sobic.005G191900 transporter family protein, putative, expressed -
12 Sobic.001G501800 ZOS1-20 - C2H2 zinc finger protein, expressed -
13 Sobic.004G119400 ATP-binding domain-containing protein, putative, expressed -
14 Sobic.006G039800 ATP-binding region, ATPase-like domain containing protein, expressed -
15 Sobic.010G152850 - -
16 Sobic.008G057000 SWIRM domain containing protein, expressed K11649: SWI/SNF related-matrix-associated actin-dependent regulator of chromatin subfamily C
17 Sobic.004G086200 peptidyl-prolyl cis-trans isomerase, putative, expressed K09566: peptidyl-prolyl isomerase G (cyclophilin G)
18 Sobic.003G070100 expressed protein -
19 Sobic.003G101500 dnaJ domain containing protein, expressed -
20 Sobic.006G222300 MBTB7 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein


Gene co-expression network
sample Sobic004G355200 Sobic004G355200 Sobic001G134300 Sobic001G134300 Sobic004G355200--Sobic001G134300 Sobic004G107200 Sobic004G107200 Sobic004G355200--Sobic004G107200 Sobic001G090800 Sobic001G090800 Sobic004G355200--Sobic001G090800 Sobic007G029200 Sobic007G029200 Sobic004G355200--Sobic007G029200 Sobic001G352900 Sobic001G352900 Sobic004G355200--Sobic001G352900 Sobic010G065300 Sobic010G065300 Sobic004G355200--Sobic010G065300 Sobic010G001100 Sobic010G001100 Sobic004G355200--Sobic010G001100 Sobic006G210000 Sobic006G210000 Sobic004G355200--Sobic006G210000 Sobic009G142000 Sobic009G142000 Sobic004G355200--Sobic009G142000 Sobic001G134300--Sobic010G065300 Sobic001G306900 Sobic001G306900 Sobic001G134300--Sobic001G306900 Sobic001G134300--Sobic010G001100 Sobic004G156500 Sobic004G156500 Sobic001G134300--Sobic004G156500 Sobic004G086200 Sobic004G086200 Sobic001G134300--Sobic004G086200 Sobic001G398800 Sobic001G398800 Sobic001G134300--Sobic001G398800 Sobic001G134300--Sobic001G090800 Sobic001G346900 Sobic001G346900 Sobic001G134300--Sobic001G346900 Sobic002G153700 Sobic002G153700 Sobic001G134300--Sobic002G153700 Sobic002G431400 Sobic002G431400 Sobic004G107200--Sobic002G431400 Sobic002G425500 Sobic002G425500 Sobic004G107200--Sobic002G425500 Sobic006G119400 Sobic006G119400 Sobic004G107200--Sobic006G119400 Sobic003G101500 Sobic003G101500 Sobic004G107200--Sobic003G101500 Sobic002G043100 Sobic002G043100 Sobic004G107200--Sobic002G043100 Sobic001G501800 Sobic001G501800 Sobic004G107200--Sobic001G501800 Sobic001G456900 Sobic001G456900 Sobic004G107200--Sobic001G456900 Sobic001G261900 Sobic001G261900 Sobic004G107200--Sobic001G261900 Sobic006G269800 Sobic006G269800 Sobic004G107200--Sobic006G269800 Sobic001G090800--Sobic001G134300 Sobic001G090800--Sobic010G065300 Sobic007G044100 Sobic007G044100 Sobic001G090800--Sobic007G044100 Sobic001G090800--Sobic010G001100 Sobic001G090800--Sobic002G153700 Sobic010G279900 Sobic010G279900 Sobic001G090800--Sobic010G279900 Sobic001G090800--Sobic001G306900 Sobic003G293200 Sobic003G293200 Sobic001G090800--Sobic003G293200 Sobic005G163100 Sobic005G163100 Sobic001G090800--Sobic005G163100 Sobic005G191900 Sobic005G191900 Sobic007G029200--Sobic005G191900 Sobic007G029200--Sobic009G142000 Sobic006G215050 Sobic006G215050 Sobic007G029200--Sobic006G215050 Sobic001G167200 Sobic001G167200 Sobic007G029200--Sobic001G167200 Sobic004G085000 Sobic004G085000 Sobic007G029200--Sobic004G085000 Sobic008G002500 Sobic008G002500 Sobic007G029200--Sobic008G002500 Sobic007G029200--Sobic001G134300 Sobic002G317200 Sobic002G317200 Sobic007G029200--Sobic002G317200 Sobic007G029200--Sobic001G352900 Sobic010G053600 Sobic010G053600 Sobic001G352900--Sobic010G053600 Sobic002G391600 Sobic002G391600 Sobic001G352900--Sobic002G391600 Sobic004G242400 Sobic004G242400 Sobic001G352900--Sobic004G242400 Sobic001G352900--Sobic010G001100 Sobic009G109200 Sobic009G109200 Sobic001G352900--Sobic009G109200 Sobic001G352900--Sobic002G317200 Sobic002G397500 Sobic002G397500 Sobic001G352900--Sobic002G397500 Sobic001G219600 Sobic001G219600 Sobic001G352900--Sobic001G219600 Sobic001G352900--Sobic003G293200 Sobic010G065300--Sobic010G001100 Sobic008G009700 Sobic008G009700 Sobic010G065300--Sobic008G009700 Sobic010G065300--Sobic002G153700 Sobic010G065300--Sobic001G306900 Sobic010G065300--Sobic001G134300 Sobic010G065300--Sobic003G293200 Sobic009G119000 Sobic009G119000 Sobic010G065300--Sobic009G119000 Sobic010G065300--Sobic004G156500 Sobic004G048800 Sobic004G048800 Sobic010G065300--Sobic004G048800 Sobic010G001100--Sobic010G065300 Sobic010G001100--Sobic004G048800 Sobic002G396500 Sobic002G396500 Sobic010G001100--Sobic002G396500 Sobic010G001100--Sobic003G293200 Sobic010G001100--Sobic004G242400 Sobic010G001100--Sobic009G109200 Sobic002G154000 Sobic002G154000 Sobic010G001100--Sobic002G154000 Sobic010G001100--Sobic001G352900 Sobic009G256300 Sobic009G256300 Sobic010G001100--Sobic009G256300 Sobic006G210000--Sobic010G001100 Sobic006G210000--Sobic003G293200 Sobic006G210000--Sobic004G156500 Sobic006G210000--Sobic010G065300 Sobic004G355800 Sobic004G355800 Sobic006G210000--Sobic004G355800 Sobic007G031600 Sobic007G031600 Sobic006G210000--Sobic007G031600 Sobic008G100100 Sobic008G100100 Sobic006G210000--Sobic008G100100 Sobic006G052300 Sobic006G052300 Sobic006G210000--Sobic006G052300 Sobic006G210000--Sobic005G191900 Sobic003G294600 Sobic003G294600 Sobic009G142000--Sobic003G294600 Sobic001G451300 Sobic001G451300 Sobic009G142000--Sobic001G451300 Sobic009G142000--Sobic004G085000 Sobic009G142000--Sobic007G029200 Sobic001G453000 Sobic001G453000 Sobic009G142000--Sobic001G453000 Sobic003G123100 Sobic003G123100 Sobic009G142000--Sobic003G123100 Sobic008G132000 Sobic008G132000 Sobic009G142000--Sobic008G132000 Sobic005G200900 Sobic005G200900 Sobic009G142000--Sobic005G200900 Sobic001G536000 Sobic001G536000 Sobic009G142000--Sobic001G536000
Octagon: transcription factors


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