Gene annotation
Transcriptome id Sobic.005G023201.1
Synonym -
Functional annotation -
UniProt A0A1Z5RGF0
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G256200 B-box (BBX) protein(PubMedID : 30626335)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CCT/B-box zinc finger protein, putative, expressed -
2 Sobic.006G120400 no apical meristem protein, putative, expressed -
3 Sobic.010G218100 expressed protein -
4 Sobic.001G326900 PPDK(PubMedID : 19549309)@phyruvate phosphate dikinase(PubMedID : 26904072)@-(PubMedID : 26976818)@pyruvate, phosphate dikinase, chloroplast precursor, putative, expressed K01006: pyruvate, orthophosphate dikinase
5 Sobic.007G155900 bZIP transcription factor, putative, expressed K14432: ABA responsive element binding factor
6 Sobic.009G242800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./late senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@protein kinase domain containing protein, expressed -
7 Sobic.006G192100 MYB family transcription factor, putative, expressed -
8 Sobic.003G121400 Homologous to Dof genes in Arabidopsis and rice.(PubMedID : 21161392)@expressed protein -
9 Sobic.003G036950 - -
10 Sobic.004G188300 regulation of Al tolerance genes and proton tolerance genes(PubMedID : 29541086)@ZOS2-11 - C2H2 zinc finger protein, expressed -
11 Sobic.006G124000 BTBZ4 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with TAZ zinc finger and Calmodulin-binding domains, expressed -
12 Sobic.003G026300 BES1/BZR1 homolog protein, putative, expressed -
13 Sobic.002G341100 bromodomain domain containing protein, expressed -
14 Sobic.001G222300 cyclin-dependent kinase inhibitor, putative, expressed -
15 Sobic.008G015700 major facilitator superfamily antiporter, putative, expressed -
16 Sobic.001G271801 - -
17 Sobic.003G117000 late embryogenesis abundant protein, putative, expressed -
18 Sobic.002G121000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
19 Sobic.002G179500 holocarboxylase synthetase, putative, expressed -
20 Sobic.001G451000 two-component response regulator, putative, expressed K14491: two-component response regulator ARR-B family


Gene co-expression network
sample Sobic005G023201 Sobic005G023201 Sobic004G256200 Sobic004G256200 Sobic005G023201--Sobic004G256200 Sobic006G120400 Sobic006G120400 Sobic005G023201--Sobic006G120400 Sobic010G218100 Sobic010G218100 Sobic005G023201--Sobic010G218100 Sobic001G326900 Sobic001G326900 Sobic005G023201--Sobic001G326900 Sobic007G155900 Sobic007G155900 Sobic005G023201--Sobic007G155900 Sobic009G242800 Sobic009G242800 Sobic005G023201--Sobic009G242800 Sobic006G192100 Sobic006G192100 Sobic005G023201--Sobic006G192100 Sobic003G121400 Sobic003G121400 Sobic005G023201--Sobic003G121400 Sobic003G036950 Sobic003G036950 Sobic005G023201--Sobic003G036950 Sobic002G341100 Sobic002G341100 Sobic004G256200--Sobic002G341100 Sobic006G261100 Sobic006G261100 Sobic004G256200--Sobic006G261100 Sobic001G116100 Sobic001G116100 Sobic004G256200--Sobic001G116100 Sobic004G250900 Sobic004G250900 Sobic004G256200--Sobic004G250900 Sobic004G256200--Sobic006G120400 Sobic001G218200 Sobic001G218200 Sobic004G256200--Sobic001G218200 Sobic002G276900 Sobic002G276900 Sobic004G256200--Sobic002G276900 Sobic008G073000 Sobic008G073000 Sobic004G256200--Sobic008G073000 Sobic002G095700 Sobic002G095700 Sobic004G256200--Sobic002G095700 Sobic006G120400--Sobic009G242800 Sobic006G120400--Sobic002G341100 Sobic006G203200 Sobic006G203200 Sobic006G120400--Sobic006G203200 Sobic006G120400--Sobic007G155900 Sobic008G015700 Sobic008G015700 Sobic006G120400--Sobic008G015700 Sobic008G106000 Sobic008G106000 Sobic006G120400--Sobic008G106000 Sobic007G043500 Sobic007G043500 Sobic006G120400--Sobic007G043500 Sobic006G120400--Sobic004G256200 Sobic002G001600 Sobic002G001600 Sobic006G120400--Sobic002G001600 Sobic010G218500 Sobic010G218500 Sobic010G218100--Sobic010G218500 Sobic003G117000 Sobic003G117000 Sobic010G218100--Sobic003G117000 Sobic006G122400 Sobic006G122400 Sobic010G218100--Sobic006G122400 Sobic004G188300 Sobic004G188300 Sobic010G218100--Sobic004G188300 Sobic007G150200 Sobic007G150200 Sobic010G218100--Sobic007G150200 Sobic001G222300 Sobic001G222300 Sobic010G218100--Sobic001G222300 Sobic002G039500 Sobic002G039500 Sobic010G218100--Sobic002G039500 Sobic002G253500 Sobic002G253500 Sobic010G218100--Sobic002G253500 Sobic010G218100--Sobic009G242800 Sobic001G326900--Sobic003G117000 Sobic001G326900--Sobic003G036950 Sobic002G284200 Sobic002G284200 Sobic001G326900--Sobic002G284200 Sobic001G326900--Sobic010G218100 Sobic001G326900--Sobic007G150200 Sobic002G082900 Sobic002G082900 Sobic001G326900--Sobic002G082900 Sobic005G117901 Sobic005G117901 Sobic001G326900--Sobic005G117901 Sobic001G326900--Sobic010G218500 Sobic001G326900--Sobic001G222300 Sobic007G216900 Sobic007G216900 Sobic007G155900--Sobic007G216900 Sobic002G347700 Sobic002G347700 Sobic007G155900--Sobic002G347700 Sobic007G155900--Sobic002G341100 Sobic001G063100 Sobic001G063100 Sobic007G155900--Sobic001G063100 Sobic002G067800 Sobic002G067800 Sobic007G155900--Sobic002G067800 Sobic007G155900--Sobic006G120400 Sobic002G164400 Sobic002G164400 Sobic007G155900--Sobic002G164400 Sobic008G165100 Sobic008G165100 Sobic007G155900--Sobic008G165100 Sobic007G155900--Sobic002G095700 Sobic009G242800--Sobic010G218100 Sobic009G242800--Sobic006G120400 Sobic008G101800 Sobic008G101800 Sobic009G242800--Sobic008G101800 Sobic005G162600 Sobic005G162600 Sobic009G242800--Sobic005G162600 Sobic009G242800--Sobic002G253500 Sobic009G242800--Sobic010G218500 Sobic009G242800--Sobic006G203200 Sobic002G221900 Sobic002G221900 Sobic009G242800--Sobic002G221900 Sobic009G242800--Sobic001G222300 Sobic001G451000 Sobic001G451000 Sobic006G192100--Sobic001G451000 Sobic005G181000 Sobic005G181000 Sobic006G192100--Sobic005G181000 Sobic006G192100--Sobic010G218100 Sobic006G192100--Sobic008G015700 Sobic003G026300 Sobic003G026300 Sobic006G192100--Sobic003G026300 Sobic006G192100--Sobic003G121400 Sobic009G027000 Sobic009G027000 Sobic006G192100--Sobic009G027000 Sobic005G167300 Sobic005G167300 Sobic006G192100--Sobic005G167300 Sobic001G439500 Sobic001G439500 Sobic006G192100--Sobic001G439500 Sobic001G515600 Sobic001G515600 Sobic003G121400--Sobic001G515600 Sobic004G279300 Sobic004G279300 Sobic003G121400--Sobic004G279300 Sobic003G121400--Sobic005G117901 Sobic003G121400--Sobic003G117000 Sobic005G130450 Sobic005G130450 Sobic003G121400--Sobic005G130450 Sobic007G211000 Sobic007G211000 Sobic003G121400--Sobic007G211000 Sobic001G024200 Sobic001G024200 Sobic003G121400--Sobic001G024200 Sobic003G121400--Sobic001G222300 Sobic004G208400 Sobic004G208400 Sobic003G121400--Sobic004G208400 Sobic008G157950 Sobic008G157950 Sobic003G036950--Sobic008G157950 Sobic004G164600 Sobic004G164600 Sobic003G036950--Sobic004G164600 Sobic005G110430 Sobic005G110430 Sobic003G036950--Sobic005G110430 Sobic008G042250 Sobic008G042250 Sobic003G036950--Sobic008G042250 Sobic002G221700 Sobic002G221700 Sobic003G036950--Sobic002G221700 Sobic001G345333 Sobic001G345333 Sobic003G036950--Sobic001G345333 Sobic004G212800 Sobic004G212800 Sobic003G036950--Sobic004G212800 Sobic002G007250 Sobic002G007250 Sobic003G036950--Sobic002G007250 Sobic004G112500 Sobic004G112500 Sobic003G036950--Sobic004G112500
Octagon: transcription factors


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