Gene annotation
Transcriptome id Sobic.005G023301.1
Synonym -
Functional annotation -
UniProt A0A1Z5RGT5
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os01g44200.1 : retrotransposon protein, putative, unclassified, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G035801 - -
2 Sobic.009G162401 - -
3 Sobic.010G146000 CSLD5 - cellulose synthase-like family D, expressed -
4 Sobic.008G140000 expressed protein -
5 Sobic.010G209700 expressed protein -
6 Sobic.006G252400 S4 domain containing protein, putative, expressed K14560: U3 small nucleolar ribonucleoprotein protein IMP3
7 Sobic.008G100300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pumilio-family RNA binding repeat domain containing protein, expressed -
8 Sobic.004G011900 - -
9 Sobic.003G229400 CGMC_MAPKCMGC_2.4 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed -
10 Sobic.007G082200 white-brown complex homolog protein 11, putative, expressed -
11 Sobic.003G156766 - -
12 Sobic.003G091600 expressed protein -
13 Sobic.007G184800 transcription factor RF2a, putative, expressed -
14 Sobic.006G100000 pentatricopeptide, putative, expressed -
15 Sobic.007G094600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@cytochrome P450 protein, putative, expressed -
16 Sobic.003G213000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./middle senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@Sugar transporter(PubMedID : 27330561)@Sugar transporter(PubMedID : 27330561)@nodulin MtN3 family protein, putative, expressed K15382: SLC50A, solute carrier family 50 (sugar transporter)
17 Sobic.006G279900 RING finger protein 13, putative, expressed K15692: RNF13, E3 ubiquitin-protein ligase RNF13
18 Sobic.009G159700 expressed protein -
19 Sobic.002G203600 protein binding protein, putative, expressed K11975: E3 ubiquitin-protein ligase RNF144
20 Sobic.008G039000 expressed protein -


Gene co-expression network
sample Sobic005G023301 Sobic005G023301 Sobic010G035801 Sobic010G035801 Sobic005G023301--Sobic010G035801 Sobic009G162401 Sobic009G162401 Sobic005G023301--Sobic009G162401 Sobic010G146000 Sobic010G146000 Sobic005G023301--Sobic010G146000 Sobic008G140000 Sobic008G140000 Sobic005G023301--Sobic008G140000 Sobic010G209700 Sobic010G209700 Sobic005G023301--Sobic010G209700 Sobic006G252400 Sobic006G252400 Sobic005G023301--Sobic006G252400 Sobic008G100300 Sobic008G100300 Sobic005G023301--Sobic008G100300 Sobic004G011900 Sobic004G011900 Sobic005G023301--Sobic004G011900 Sobic003G229400 Sobic003G229400 Sobic005G023301--Sobic003G229400 Sobic010G035801--Sobic010G209700 Sobic009G228400 Sobic009G228400 Sobic010G035801--Sobic009G228400 Sobic010G035801--Sobic003G229400 Sobic004G218300 Sobic004G218300 Sobic010G035801--Sobic004G218300 Sobic002G203600 Sobic002G203600 Sobic010G035801--Sobic002G203600 Sobic006G100000 Sobic006G100000 Sobic010G035801--Sobic006G100000 Sobic004G042900 Sobic004G042900 Sobic010G035801--Sobic004G042900 Sobic006G215100 Sobic006G215100 Sobic010G035801--Sobic006G215100 Sobic008G152900 Sobic008G152900 Sobic010G035801--Sobic008G152900 Sobic005G085100 Sobic005G085100 Sobic009G162401--Sobic005G085100 Sobic002G128400 Sobic002G128400 Sobic009G162401--Sobic002G128400 Sobic010G143400 Sobic010G143400 Sobic009G162401--Sobic010G143400 Sobic005G148400 Sobic005G148400 Sobic009G162401--Sobic005G148400 Sobic001G246200 Sobic001G246200 Sobic009G162401--Sobic001G246200 Sobic001G271000 Sobic001G271000 Sobic009G162401--Sobic001G271000 Sobic005G148500 Sobic005G148500 Sobic009G162401--Sobic005G148500 Sobic005G170800 Sobic005G170800 Sobic009G162401--Sobic005G170800 Sobic008G013900 Sobic008G013900 Sobic009G162401--Sobic008G013900 Sobic010G146000--Sobic004G011900 Sobic008G100600 Sobic008G100600 Sobic010G146000--Sobic008G100600 Sobic010G146000--Sobic008G100300 Sobic003G213000 Sobic003G213000 Sobic010G146000--Sobic003G213000 Sobic001G405100 Sobic001G405100 Sobic010G146000--Sobic001G405100 Sobic005G110424 Sobic005G110424 Sobic010G146000--Sobic005G110424 Sobic004G082800 Sobic004G082800 Sobic010G146000--Sobic004G082800 Sobic010G202200 Sobic010G202200 Sobic010G146000--Sobic010G202200 Sobic008G036600 Sobic008G036600 Sobic010G146000--Sobic008G036600 Sobic004G046001 Sobic004G046001 Sobic008G140000--Sobic004G046001 Sobic003G156766 Sobic003G156766 Sobic008G140000--Sobic003G156766 Sobic001G538800 Sobic001G538800 Sobic008G140000--Sobic001G538800 Sobic008G140000--Sobic010G035801 Sobic008G140000--Sobic005G023301 Sobic008G140000--Sobic001G246200 Sobic010G116700 Sobic010G116700 Sobic008G140000--Sobic010G116700 Sobic008G117900 Sobic008G117900 Sobic008G140000--Sobic008G117900 Sobic008G140000--Sobic008G100300 Sobic010G209700--Sobic010G035801 Sobic010G209700--Sobic006G100000 Sobic006G144000 Sobic006G144000 Sobic010G209700--Sobic006G144000 Sobic007G158900 Sobic007G158900 Sobic010G209700--Sobic007G158900 Sobic010G209700--Sobic003G229400 Sobic004G353400 Sobic004G353400 Sobic010G209700--Sobic004G353400 Sobic009G227100 Sobic009G227100 Sobic010G209700--Sobic009G227100 Sobic004G026100 Sobic004G026100 Sobic010G209700--Sobic004G026100 Sobic003G079750 Sobic003G079750 Sobic010G209700--Sobic003G079750 Sobic003G005100 Sobic003G005100 Sobic006G252400--Sobic003G005100 Sobic004G127300 Sobic004G127300 Sobic006G252400--Sobic004G127300 Sobic007G192400 Sobic007G192400 Sobic006G252400--Sobic007G192400 Sobic002G113200 Sobic002G113200 Sobic006G252400--Sobic002G113200 Sobic004G259300 Sobic004G259300 Sobic006G252400--Sobic004G259300 Sobic006G252400--Sobic003G213000 Sobic007G184800 Sobic007G184800 Sobic006G252400--Sobic007G184800 Sobic006G252400--Sobic008G036600 Sobic010G260900 Sobic010G260900 Sobic006G252400--Sobic010G260900 Sobic008G100300--Sobic010G146000 Sobic004G189000 Sobic004G189000 Sobic008G100300--Sobic004G189000 Sobic008G100300--Sobic003G213000 Sobic010G277700 Sobic010G277700 Sobic008G100300--Sobic010G277700 Sobic008G100300--Sobic004G011900 Sobic007G082200 Sobic007G082200 Sobic008G100300--Sobic007G082200 Sobic010G134650 Sobic010G134650 Sobic008G100300--Sobic010G134650 Sobic006G117700 Sobic006G117700 Sobic008G100300--Sobic006G117700 Sobic008G100300--Sobic008G100600 Sobic004G011900--Sobic010G146000 Sobic004G011900--Sobic008G100600 Sobic004G011900--Sobic008G100300 Sobic004G011900--Sobic003G213000 Sobic004G011900--Sobic004G082800 Sobic004G011900--Sobic008G036600 Sobic004G011900--Sobic007G082200 Sobic004G011900--Sobic005G110424 Sobic004G011900--Sobic001G405100 Sobic010G073600 Sobic010G073600 Sobic003G229400--Sobic010G073600 Sobic003G128600 Sobic003G128600 Sobic003G229400--Sobic003G128600 Sobic003G229400--Sobic006G215100 Sobic003G229400--Sobic010G035801 Sobic003G229400--Sobic006G100000 Sobic004G197900 Sobic004G197900 Sobic003G229400--Sobic004G197900 Sobic007G191100 Sobic007G191100 Sobic003G229400--Sobic007G191100 Sobic006G130200 Sobic006G130200 Sobic003G229400--Sobic006G130200 Sobic002G033600 Sobic002G033600 Sobic003G229400--Sobic002G033600
Octagon: transcription factors


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