Gene annotation
Transcriptome id Sobic.005G029800.1
Synonym Sb05g002510
Functional annotation NBS-LRR disease resistance protein, putative, expressed
UniProt C5Y472
Pfam PF00931
Panther DB PTHR23155 PTHR23155:SF605
NCBI CDD KOG4658; Apoptotic ATPase
KEGG Orthology K13457; RPM1, disease resistance protein RPM1
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G46530 : NB-ARC domain-containing disease resistance protein
RAP-DB (Rice) LOC_Os12g09240.1 : NBS-LRR disease resistance protein, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G193200 expressed protein -
2 Sobic.002G031700 - -
3 Sobic.001G501300 cell division control protein 48 homolog E, putative, expressed K13525: VCP, transitional endoplasmic reticulum ATPase
4 Sobic.002G339300 myosin-Vb, putative, expressed K10357: myosin V
5 Sobic.001G261900 caffeine-induced death protein 1, putative, expressed -
6 Sobic.010G110332 - -
7 Sobic.001G207200 MEE12, putative, expressed -
8 Sobic.008G174100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@RGH2B, putative, expressed -
9 Sobic.010G231100 glutamate receptor, putative, expressed K05387: glutamate receptor, ionotropic, plant
10 Sobic.004G262700 - -
11 Sobic.003G016900 splicing factor 3B subunit 1, putative, expressed K12828: SF3B1, splicing factor 3B subunit 1
12 Sobic.010G100800 alpha-mannosidase 2, putative, expressed K01231: alpha-mannosidase II
13 Sobic.010G189200 pentatricopeptide, putative, expressed -
14 Sobic.001G529600 1,3-beta-glucan synthase component domain containing protein, expressed K11000: callose synthase
15 Sobic.006G119400 SWIM zinc finger family protein, putative, expressed -
16 Sobic.001G300100 - -
17 Sobic.004G183800 AAA family ATPase, putative, expressed K03544: clpX, ATP-dependent Clp protease ATP-binding subunit ClpX
18 Sobic.008G165900 similar to DEAD-box ATP-dependent RNA helicase 9(PubMedID : 29862293)@- -
19 Sobic.009G079950 - -
20 Sobic.010G211500 DNA-directed RNA polymerase 3A, chloroplast precursor, putative, expressed K10908: POLRMT, DNA-directed RNA polymerase, mitochondrial


Gene co-expression network
sample Sobic005G029800 Sobic005G029800 Sobic003G193200 Sobic003G193200 Sobic005G029800--Sobic003G193200 Sobic002G031700 Sobic002G031700 Sobic005G029800--Sobic002G031700 Sobic001G501300 Sobic001G501300 Sobic005G029800--Sobic001G501300 Sobic002G339300 Sobic002G339300 Sobic005G029800--Sobic002G339300 Sobic001G261900 Sobic001G261900 Sobic005G029800--Sobic001G261900 Sobic010G110332 Sobic010G110332 Sobic005G029800--Sobic010G110332 Sobic001G207200 Sobic001G207200 Sobic005G029800--Sobic001G207200 Sobic008G174100 Sobic008G174100 Sobic005G029800--Sobic008G174100 Sobic010G231100 Sobic010G231100 Sobic005G029800--Sobic010G231100 Sobic003G193200--Sobic002G339300 Sobic002G418600 Sobic002G418600 Sobic003G193200--Sobic002G418600 Sobic006G119400 Sobic006G119400 Sobic003G193200--Sobic006G119400 Sobic010G100800 Sobic010G100800 Sobic003G193200--Sobic010G100800 Sobic009G052700 Sobic009G052700 Sobic003G193200--Sobic009G052700 Sobic003G193200--Sobic001G501300 Sobic005G026000 Sobic005G026000 Sobic003G193200--Sobic005G026000 Sobic001G124100 Sobic001G124100 Sobic003G193200--Sobic001G124100 Sobic003G193200--Sobic002G031700 Sobic007G075800 Sobic007G075800 Sobic002G031700--Sobic007G075800 Sobic002G155000 Sobic002G155000 Sobic002G031700--Sobic002G155000 Sobic002G031700--Sobic010G100800 Sobic008G165900 Sobic008G165900 Sobic002G031700--Sobic008G165900 Sobic003G134000 Sobic003G134000 Sobic002G031700--Sobic003G134000 Sobic002G031700--Sobic001G501300 Sobic007G097400 Sobic007G097400 Sobic002G031700--Sobic007G097400 Sobic002G031700--Sobic003G193200 Sobic002G031700--Sobic001G207200 Sobic001G501300--Sobic010G100800 Sobic001G501300--Sobic001G207200 Sobic004G262700 Sobic004G262700 Sobic001G501300--Sobic004G262700 Sobic010G176300 Sobic010G176300 Sobic001G501300--Sobic010G176300 Sobic001G501300--Sobic008G165900 Sobic002G167500 Sobic002G167500 Sobic001G501300--Sobic002G167500 Sobic001G501300--Sobic005G026000 Sobic001G501300--Sobic003G193200 Sobic001G501300--Sobic002G031700 Sobic002G339300--Sobic004G262700 Sobic004G026500 Sobic004G026500 Sobic002G339300--Sobic004G026500 Sobic009G193500 Sobic009G193500 Sobic002G339300--Sobic009G193500 Sobic002G339300--Sobic001G124100 Sobic001G396000 Sobic001G396000 Sobic002G339300--Sobic001G396000 Sobic002G339300--Sobic003G193200 Sobic003G190000 Sobic003G190000 Sobic002G339300--Sobic003G190000 Sobic002G168500 Sobic002G168500 Sobic002G339300--Sobic002G168500 Sobic010G197000 Sobic010G197000 Sobic002G339300--Sobic010G197000 Sobic001G261900--Sobic010G100800 Sobic007G212300 Sobic007G212300 Sobic001G261900--Sobic007G212300 Sobic004G107200 Sobic004G107200 Sobic001G261900--Sobic004G107200 Sobic004G176000 Sobic004G176000 Sobic001G261900--Sobic004G176000 Sobic001G261900--Sobic006G119400 Sobic008G132900 Sobic008G132900 Sobic001G261900--Sobic008G132900 Sobic004G351800 Sobic004G351800 Sobic001G261900--Sobic004G351800 Sobic007G000300 Sobic007G000300 Sobic001G261900--Sobic007G000300 Sobic007G065100 Sobic007G065100 Sobic001G261900--Sobic007G065100 Sobic010G110400 Sobic010G110400 Sobic010G110332--Sobic010G110400 Sobic001G060500 Sobic001G060500 Sobic010G110332--Sobic001G060500 Sobic004G248400 Sobic004G248400 Sobic010G110332--Sobic004G248400 Sobic010G110332--Sobic009G052700 Sobic010G110332--Sobic002G418600 Sobic006G233700 Sobic006G233700 Sobic010G110332--Sobic006G233700 Sobic003G125900 Sobic003G125900 Sobic010G110332--Sobic003G125900 Sobic002G181000 Sobic002G181000 Sobic010G110332--Sobic002G181000 Sobic003G334100 Sobic003G334100 Sobic010G110332--Sobic003G334100 Sobic010G211500 Sobic010G211500 Sobic001G207200--Sobic010G211500 Sobic001G207200--Sobic010G231100 Sobic001G207200--Sobic001G501300 Sobic009G036300 Sobic009G036300 Sobic001G207200--Sobic009G036300 Sobic001G207200--Sobic008G165900 Sobic001G207200--Sobic009G052700 Sobic009G079950 Sobic009G079950 Sobic001G207200--Sobic009G079950 Sobic003G332900 Sobic003G332900 Sobic001G207200--Sobic003G332900 Sobic001G224200 Sobic001G224200 Sobic001G207200--Sobic001G224200 Sobic008G174100--Sobic005G029800 Sobic010G038100 Sobic010G038100 Sobic008G174100--Sobic010G038100 Sobic003G389200 Sobic003G389200 Sobic008G174100--Sobic003G389200 Sobic004G178500 Sobic004G178500 Sobic008G174100--Sobic004G178500 Sobic006G220000 Sobic006G220000 Sobic008G174100--Sobic006G220000 Sobic001G230000 Sobic001G230000 Sobic008G174100--Sobic001G230000 Sobic001G298900 Sobic001G298900 Sobic008G174100--Sobic001G298900 Sobic008G174100--Sobic006G119400 Sobic006G050700 Sobic006G050700 Sobic008G174100--Sobic006G050700 Sobic003G179400 Sobic003G179400 Sobic010G231100--Sobic003G179400 Sobic010G231100--Sobic001G207200 Sobic006G214700 Sobic006G214700 Sobic010G231100--Sobic006G214700 Sobic005G028900 Sobic005G028900 Sobic010G231100--Sobic005G028900 Sobic010G231100--Sobic009G036300 Sobic010G231100--Sobic009G079950 Sobic009G141400 Sobic009G141400 Sobic010G231100--Sobic009G141400 Sobic006G024500 Sobic006G024500 Sobic010G231100--Sobic006G024500 Sobic001G450600 Sobic001G450600 Sobic010G231100--Sobic001G450600
Octagon: transcription factors


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