Gene annotation
Transcriptome id Sobic.005G167800.1
Synonym Sb05g022830
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
expressed protein
UniProt C5Y5C1
Pfam -
Panther DB PTHR34113 PTHR34113:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G55760 : -
RAP-DB (Rice) LOC_Os11g37560.2 : expressed protein
MaizeGDB (Corn) Zm00025a033914
Brachypodium KQJ88026
Barley HORVU4Hr1G039870.3 , HORVU4Hr1G039870.2 , HORVU4Hr1G039870.1 , HORVU4Hr1G039880.1
Wheat TraesCS4A02G149300 , TraesCS4B02G158500
Populus PNT24940 , PNT24936 , PNT24937 , PNT24938 , PNT24939


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G302800 MSP domain containing protein, expressed -
2 Sobic.004G213300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@EF hand family protein, putative, expressed -
3 Sobic.004G261700 ARID/BRIGHT DNA-binding domain-containing protein, putative, expressed -
4 Sobic.003G405600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@exostosin family domain containing protein, expressed -
5 Sobic.003G198900 protein phosphatase 2C, putative, expressed -
6 Sobic.003G250400 zinc finger, C3HC4 type domain containing protein, expressed -
7 Sobic.001G257800 myosin, putative, expressed K10357: myosin V
8 Sobic.001G475300 ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed K11842: ubiquitin carboxyl-terminal hydrolase 12/46
9 Sobic.001G321900 CGMC_GSK.9 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed -
10 Sobic.003G117800 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed -
11 Sobic.010G213500 ubiquitin carboxyl-terminal hydrolase family protein, expressed K11855: ubiquitin carboxyl-terminal hydrolase 36/42
12 Sobic.006G141800 expressed protein -
13 Sobic.004G331000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OsPOP6 - Putative Prolyl Oligopeptidase homologue, expressed -
14 Sobic.003G353700 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@MYB family transcription factor, putative, expressed -
15 Sobic.002G106200 OsFBLD6 - F-box, LRR and FBD domain containing protein, expressed -
16 Sobic.003G402800 DUF647 domain containing protein, putative, expressed -
17 Sobic.010G024400 expressed protein -
18 Sobic.005G169500 GAUT2/LGT2, putative, expressed K13648: alpha-1,4-galacturonosyltransferase
19 Sobic.002G057400 expressed protein K16586: HAUS augmin-like complex subunit 3
20 Sobic.007G032000 tryptophan synthase beta chain 1, putative, expressed K01696: tryptophan synthase beta chain


Gene co-expression network
sample Sobic005G167800 Sobic005G167800 Sobic004G302800 Sobic004G302800 Sobic005G167800--Sobic004G302800 Sobic004G213300 Sobic004G213300 Sobic005G167800--Sobic004G213300 Sobic004G261700 Sobic004G261700 Sobic005G167800--Sobic004G261700 Sobic003G405600 Sobic003G405600 Sobic005G167800--Sobic003G405600 Sobic003G198900 Sobic003G198900 Sobic005G167800--Sobic003G198900 Sobic003G250400 Sobic003G250400 Sobic005G167800--Sobic003G250400 Sobic001G257800 Sobic001G257800 Sobic005G167800--Sobic001G257800 Sobic001G475300 Sobic001G475300 Sobic005G167800--Sobic001G475300 Sobic001G321900 Sobic001G321900 Sobic005G167800--Sobic001G321900 Sobic004G302800--Sobic003G198900 Sobic004G302800--Sobic003G250400 Sobic004G302800--Sobic001G475300 Sobic004G302800--Sobic004G213300 Sobic004G302800--Sobic001G257800 Sobic003G402800 Sobic003G402800 Sobic004G302800--Sobic003G402800 Sobic004G302800--Sobic003G405600 Sobic008G055500 Sobic008G055500 Sobic004G302800--Sobic008G055500 Sobic001G141400 Sobic001G141400 Sobic004G302800--Sobic001G141400 Sobic004G213300--Sobic003G198900 Sobic004G213300--Sobic004G302800 Sobic004G213300--Sobic001G475300 Sobic004G213300--Sobic003G250400 Sobic003G134300 Sobic003G134300 Sobic004G213300--Sobic003G134300 Sobic004G198600 Sobic004G198600 Sobic004G213300--Sobic004G198600 Sobic003G243800 Sobic003G243800 Sobic004G213300--Sobic003G243800 Sobic007G172700 Sobic007G172700 Sobic004G213300--Sobic007G172700 Sobic004G213300--Sobic008G055500 Sobic006G001100 Sobic006G001100 Sobic004G261700--Sobic006G001100 Sobic001G167600 Sobic001G167600 Sobic004G261700--Sobic001G167600 Sobic010G024400 Sobic010G024400 Sobic004G261700--Sobic010G024400 Sobic002G074800 Sobic002G074800 Sobic004G261700--Sobic002G074800 Sobic004G064200 Sobic004G064200 Sobic004G261700--Sobic004G064200 Sobic008G136700 Sobic008G136700 Sobic004G261700--Sobic008G136700 Sobic006G204400 Sobic006G204400 Sobic004G261700--Sobic006G204400 Sobic006G027601 Sobic006G027601 Sobic004G261700--Sobic006G027601 Sobic008G136601 Sobic008G136601 Sobic004G261700--Sobic008G136601 Sobic003G117800 Sobic003G117800 Sobic003G405600--Sobic003G117800 Sobic007G077532 Sobic007G077532 Sobic003G405600--Sobic007G077532 Sobic003G405600--Sobic001G257800 Sobic001G114200 Sobic001G114200 Sobic003G405600--Sobic001G114200 Sobic006G060000 Sobic006G060000 Sobic003G405600--Sobic006G060000 Sobic007G030100 Sobic007G030100 Sobic003G405600--Sobic007G030100 Sobic010G213500 Sobic010G213500 Sobic003G405600--Sobic010G213500 Sobic003G405600--Sobic007G172700 Sobic003G405600--Sobic008G055500 Sobic003G198900--Sobic003G250400 Sobic003G198900--Sobic004G302800 Sobic006G270000 Sobic006G270000 Sobic003G198900--Sobic006G270000 Sobic003G198900--Sobic001G257800 Sobic003G024400 Sobic003G024400 Sobic003G198900--Sobic003G024400 Sobic003G198900--Sobic002G074800 Sobic001G257200 Sobic001G257200 Sobic003G198900--Sobic001G257200 Sobic008G069300 Sobic008G069300 Sobic003G198900--Sobic008G069300 Sobic003G198900--Sobic004G213300 Sobic003G250400--Sobic001G475300 Sobic003G250400--Sobic003G198900 Sobic003G250400--Sobic001G257800 Sobic003G428000 Sobic003G428000 Sobic003G250400--Sobic003G428000 Sobic004G082800 Sobic004G082800 Sobic003G250400--Sobic004G082800 Sobic003G250400--Sobic010G024400 Sobic010G181600 Sobic010G181600 Sobic003G250400--Sobic010G181600 Sobic003G250400--Sobic003G117800 Sobic003G250400--Sobic001G141400 Sobic001G257800--Sobic003G402800 Sobic003G385300 Sobic003G385300 Sobic001G257800--Sobic003G385300 Sobic010G134650 Sobic010G134650 Sobic001G257800--Sobic010G134650 Sobic001G257800--Sobic004G064200 Sobic001G257800--Sobic010G024400 Sobic004G176200 Sobic004G176200 Sobic001G257800--Sobic004G176200 Sobic001G257800--Sobic002G074800 Sobic001G257800--Sobic004G261700 Sobic008G152700 Sobic008G152700 Sobic001G257800--Sobic008G152700 Sobic001G475300--Sobic003G250400 Sobic001G475300--Sobic010G181600 Sobic001G475300--Sobic001G141400 Sobic001G475300--Sobic003G117800 Sobic001G475300--Sobic007G172700 Sobic002G355800 Sobic002G355800 Sobic001G475300--Sobic002G355800 Sobic003G058500 Sobic003G058500 Sobic001G475300--Sobic003G058500 Sobic001G475300--Sobic008G152700 Sobic001G475300--Sobic004G302800 Sobic003G398400 Sobic003G398400 Sobic001G321900--Sobic003G398400 Sobic009G122500 Sobic009G122500 Sobic001G321900--Sobic009G122500 Sobic001G193100 Sobic001G193100 Sobic001G321900--Sobic001G193100 Sobic001G335000 Sobic001G335000 Sobic001G321900--Sobic001G335000 Sobic001G308400 Sobic001G308400 Sobic001G321900--Sobic001G308400 SobicK028600 SobicK028600 Sobic001G321900--SobicK028600 Sobic004G084500 Sobic004G084500 Sobic001G321900--Sobic004G084500 Sobic002G147100 Sobic002G147100 Sobic001G321900--Sobic002G147100 Sobic010G074900 Sobic010G074900 Sobic001G321900--Sobic010G074900
Octagon: transcription factors


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