Gene annotation
Transcriptome id Sobic.006G022200.1
Synonym MRP10, ATMRP10, Sb06g002080
Functional annotation similar to MRP-like ABC transporter (PubMedID : 29862293)
multidrug resistance-associated protein, putative, expressed
UniProt C5YCN5
Pfam PF00664 PF00005
Panther DB PTHR24223 PTHR24223:SF215
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016021; integral component of membrane GO:0006810transport GO:0005524ATP binding GO:0016887ATPase activity


Orthologs (automatic annotation)
TAIR AT2G47800 : multidrug resistance-associated protein 4
RAP-DB (Rice) LOC_Os04g13210.1 : multidrug resistance-associated protein, putative, expressed
MaizeGDB (Corn) Zm00025a012426
Brachypodium KQJ81850
Barley HORVU2Hr1G009830.1 , HORVU2Hr1G009580.8 , HORVU2Hr1G009580.6 , HORVU2Hr1G009580.7 , HORVU2Hr1G009580.4 , HORVU2Hr1G009580.5 , HORVU2Hr1G009580.2 , HORVU2Hr1G009580.3 , HORVU2Hr1G009580.1
Wheat TraesCS2B02G069000 , TraesCS2B02G069000 , TraesCS2D02G055600 , TraesCS2A02G056800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G179400 niemann-Pick C1 protein precursor, putative, expressed K12385: Niemann-Pick C1 protein
2 Sobic.006G146200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./early senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@Os4bglu18 - monolignol beta-glucoside homologue, expressed K05350: beta-glucosidase
3 Sobic.007G150700 Leucine Rich Repeat family protein, expressed K15082: DNA repair protein RAD7
4 Sobic.004G032800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CGMC_MAPKCMGC_2.7 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed K04371: ERK, mitogen-activated protein kinase 1/3
5 Sobic.001G265600 aldose 1-epimerase, putative, expressed K01785: galM, aldose 1-epimerase
6 Sobic.009G069000 AGC_AGC_other_NDRh_TRCd.1 - ACG kinases include homologs to PKA, PKG and PKC, expressed -
7 Sobic.001G082500 cytochrome P450, putative, expressed -
8 Sobic.006G139000 carboxyvinyl-carboxyphosphonate phosphorylmutase, putative, expressed -
9 Sobic.008G064100 flavin monooxygenase, putative, expressed K11816: indole-3-pyruvate monooxygenase
10 Sobic.001G249200 KH domain containing protein, putative, expressed K13162: poly(rC)-binding protein 2
11 Sobic.004G354500 expressed protein -
12 Sobic.008G188200 - -
13 Sobic.005G178200 hypothetical protein -
14 Sobic.009G212600 expressed protein K00294: 1-pyrroline-5-carboxylate dehydrogenase
15 Sobic.008G069200 OsMADS13 - MADS-box family gene with MIKCc type-box, expressed -
16 Sobic.008G122500 expressed protein -
17 Sobic.007G024000 - -
18 Sobic.001G278700 Inositol 1, 3, 4-trisphosphate 5/6-kinase, putative, expressed K00913: inositol-1,3,4-trisphosphate 5/6-kinase / inositol-tetrakisphosphate 1-kinase
19 Sobic.009G237700 aldose 1-epimerase, putative, expressed K01792: glucose-6-phosphate 1-epimerase
20 Sobic.001G417600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@actin-depolymerizing factor, putative, expressed K05765: cofilin


Gene co-expression network
sample Sobic006G022200 Sobic006G022200 Sobic006G179400 Sobic006G179400 Sobic006G022200--Sobic006G179400 Sobic006G146200 Sobic006G146200 Sobic006G022200--Sobic006G146200 Sobic007G150700 Sobic007G150700 Sobic006G022200--Sobic007G150700 Sobic004G032800 Sobic004G032800 Sobic006G022200--Sobic004G032800 Sobic001G265600 Sobic001G265600 Sobic006G022200--Sobic001G265600 Sobic009G069000 Sobic009G069000 Sobic006G022200--Sobic009G069000 Sobic001G082500 Sobic001G082500 Sobic006G022200--Sobic001G082500 Sobic006G139000 Sobic006G139000 Sobic006G022200--Sobic006G139000 Sobic008G064100 Sobic008G064100 Sobic006G022200--Sobic008G064100 Sobic003G161800 Sobic003G161800 Sobic006G179400--Sobic003G161800 Sobic006G015500 Sobic006G015500 Sobic006G179400--Sobic006G015500 Sobic006G179400--Sobic009G069000 Sobic006G061100 Sobic006G061100 Sobic006G179400--Sobic006G061100 Sobic004G075700 Sobic004G075700 Sobic006G179400--Sobic004G075700 Sobic009G030400 Sobic009G030400 Sobic006G179400--Sobic009G030400 Sobic003G180100 Sobic003G180100 Sobic006G179400--Sobic003G180100 Sobic001G373700 Sobic001G373700 Sobic006G179400--Sobic001G373700 Sobic006G179400--Sobic006G022200 Sobic001G417600 Sobic001G417600 Sobic006G146200--Sobic001G417600 Sobic007G126000 Sobic007G126000 Sobic006G146200--Sobic007G126000 Sobic001G278700 Sobic001G278700 Sobic006G146200--Sobic001G278700 Sobic006G146200--Sobic006G139000 Sobic005G083280 Sobic005G083280 Sobic006G146200--Sobic005G083280 Sobic004G322901 Sobic004G322901 Sobic006G146200--Sobic004G322901 Sobic006G015800 Sobic006G015800 Sobic006G146200--Sobic006G015800 Sobic006G018751 Sobic006G018751 Sobic006G146200--Sobic006G018751 Sobic005G033400 Sobic005G033400 Sobic006G146200--Sobic005G033400 Sobic001G442200 Sobic001G442200 Sobic007G150700--Sobic001G442200 Sobic004G196800 Sobic004G196800 Sobic007G150700--Sobic004G196800 Sobic005G171800 Sobic005G171800 Sobic007G150700--Sobic005G171800 Sobic004G212350 Sobic004G212350 Sobic007G150700--Sobic004G212350 Sobic005G032500 Sobic005G032500 Sobic007G150700--Sobic005G032500 Sobic010G060100 Sobic010G060100 Sobic007G150700--Sobic010G060100 Sobic002G100000 Sobic002G100000 Sobic007G150700--Sobic002G100000 Sobic001G425900 Sobic001G425900 Sobic007G150700--Sobic001G425900 Sobic010G084800 Sobic010G084800 Sobic007G150700--Sobic010G084800 Sobic003G084000 Sobic003G084000 Sobic004G032800--Sobic003G084000 Sobic009G212600 Sobic009G212600 Sobic004G032800--Sobic009G212600 Sobic005G197100 Sobic005G197100 Sobic004G032800--Sobic005G197100 Sobic009G166600 Sobic009G166600 Sobic004G032800--Sobic009G166600 Sobic002G313900 Sobic002G313900 Sobic004G032800--Sobic002G313900 Sobic004G160700 Sobic004G160700 Sobic004G032800--Sobic004G160700 Sobic007G065500 Sobic007G065500 Sobic004G032800--Sobic007G065500 Sobic005G079900 Sobic005G079900 Sobic004G032800--Sobic005G079900 Sobic010G020700 Sobic010G020700 Sobic004G032800--Sobic010G020700 Sobic003G226200 Sobic003G226200 Sobic001G265600--Sobic003G226200 Sobic002G415900 Sobic002G415900 Sobic001G265600--Sobic002G415900 Sobic008G186200 Sobic008G186200 Sobic001G265600--Sobic008G186200 Sobic010G134400 Sobic010G134400 Sobic001G265600--Sobic010G134400 Sobic002G058500 Sobic002G058500 Sobic001G265600--Sobic002G058500 Sobic001G265600--Sobic009G069000 Sobic003G280300 Sobic003G280300 Sobic001G265600--Sobic003G280300 Sobic001G265600--Sobic005G079900 Sobic009G234800 Sobic009G234800 Sobic001G265600--Sobic009G234800 Sobic007G028100 Sobic007G028100 Sobic009G069000--Sobic007G028100 Sobic007G000200 Sobic007G000200 Sobic009G069000--Sobic007G000200 Sobic009G069000--Sobic006G179400 Sobic006G139100 Sobic006G139100 Sobic009G069000--Sobic006G139100 Sobic009G069000--Sobic001G265600 Sobic001G293700 Sobic001G293700 Sobic009G069000--Sobic001G293700 Sobic002G245000 Sobic002G245000 Sobic009G069000--Sobic002G245000 Sobic009G069000--Sobic005G197100 Sobic003G089000 Sobic003G089000 Sobic009G069000--Sobic003G089000 Sobic003G036700 Sobic003G036700 Sobic001G082500--Sobic003G036700 Sobic001G082500--Sobic001G417600 Sobic010G133700 Sobic010G133700 Sobic001G082500--Sobic010G133700 Sobic006G147400 Sobic006G147400 Sobic001G082500--Sobic006G147400 Sobic006G132400 Sobic006G132400 Sobic001G082500--Sobic006G132400 Sobic001G196700 Sobic001G196700 Sobic001G082500--Sobic001G196700 Sobic001G082500--Sobic006G139000 Sobic007G194800 Sobic007G194800 Sobic001G082500--Sobic007G194800 Sobic001G280000 Sobic001G280000 Sobic001G082500--Sobic001G280000 Sobic006G139000--Sobic002G058500 Sobic006G139000--Sobic001G417600 Sobic006G139000--Sobic001G280000 Sobic005G019800 Sobic005G019800 Sobic006G139000--Sobic005G019800 Sobic001G395700 Sobic001G395700 Sobic006G139000--Sobic001G395700 Sobic006G139000--Sobic003G226200 Sobic006G139000--Sobic005G197100 Sobic003G304200 Sobic003G304200 Sobic006G139000--Sobic003G304200 Sobic009G055600 Sobic009G055600 Sobic006G139000--Sobic009G055600 Sobic008G082300 Sobic008G082300 Sobic008G064100--Sobic008G082300 Sobic007G131100 Sobic007G131100 Sobic008G064100--Sobic007G131100 Sobic002G358000 Sobic002G358000 Sobic008G064100--Sobic002G358000 Sobic005G035500 Sobic005G035500 Sobic008G064100--Sobic005G035500 Sobic005G178200 Sobic005G178200 Sobic008G064100--Sobic005G178200 Sobic008G188200 Sobic008G188200 Sobic008G064100--Sobic008G188200 Sobic007G025100 Sobic007G025100 Sobic008G064100--Sobic007G025100 Sobic003G415300 Sobic003G415300 Sobic008G064100--Sobic003G415300 Sobic008G069200 Sobic008G069200 Sobic008G064100--Sobic008G069200
Octagon: transcription factors


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