Gene annotation
Transcriptome id Sobic.009G069000.1
Synonym
Functional annotation AGC_AGC_other_NDRh_TRCd.1 - ACG kinases include homologs to PKA, PKG and PKC, expressed
UniProt A0A1B6P740
Pfam PF00433 PF07714 PF00069
Panther DB PTHR24356 PTHR24356:SF206
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0005524ATP binding GO:0004674protein serine/threonine kinase activity GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT4G33080 : AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein
RAP-DB (Rice) LOC_Os01g09200.1 : AGC_AGC_other_NDRh_TRCd.1 - ACG kinases include homologs to PKA, PKG and PKC, expressed
MaizeGDB (Corn) Zm00025a035784 , Zm00025a037039
Brachypodium KQK07170 , KQK07171
Barley HORVU1Hr1G077430.12 , HORVU1Hr1G077430.13 , HORVU1Hr1G077430.10 , HORVU1Hr1G077430.11 , HORVU1Hr1G027770.8 , HORVU1Hr1G027770.1 , HORVU1Hr1G027770.5 , HORVU1Hr1G030190.4 , HORVU1Hr1G030190.2 , HORVU1Hr1G030190.3 , HORVU1Hr1G030190.1 , HORVU1Hr1G027770.10 , HORVU1Hr1G027770.11 , HORVU1Hr1G027770.12 , HORVU1Hr1G027770.13 , HORVU1Hr1G027770.14 , HORVU1Hr1G027770.7 , HORVU1Hr1G077430.4 , HORVU1Hr1G077430.5 , HORVU1Hr1G077430.6 , HORVU1Hr1G077430.7 , HORVU1Hr1G077430.1 , HORVU1Hr1G077430.2 , HORVU1Hr1G077430.3 , HORVU1Hr1G077430.8 , HORVU1Hr1G077430.9
Wheat TraesCS1A02G121700 , TraesCS1A02G121700 , TraesCS1A02G121700 , TraesCS1A02G121700 , TraesCS1A02G121700 , TraesCS1B02G140900 , TraesCS1B02G140900 , TraesCS1B02G140900 , TraesCS1B02G140900 , TraesCS1D02G122500 , TraesCS1D02G122500 , TraesCS1D02G122500 , TraesCS1D02G122500 , TraesCS1D02G122500
Populus PNT31750 , PNT31747 , PNT31749 , PNT31748


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cDNA sequences
Sobic.009G069000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G028100 WD repeat-containing protein, putative, expressed -
2 Sobic.007G000200 expressed protein -
3 Sobic.006G179400 niemann-Pick C1 protein precursor, putative, expressed K12385: Niemann-Pick C1 protein
4 Sobic.006G139100 polyadenylate-binding protein, putative, expressed K13126: polyadenylate-binding protein
5 Sobic.001G265600 aldose 1-epimerase, putative, expressed K01785: galM, aldose 1-epimerase
6 Sobic.001G293700 expressed protein -
7 Sobic.002G245000 HECT-domain domain containing protein, expressed K10591: NEDD4, E3 ubiquitin-protein ligase NEDD4
8 Sobic.005G197100 acyltransferase, putative, expressed K13523: lysophosphatidic acid acyltransferase / lysophosphatidylinositol acyltransferase
9 Sobic.003G089000 ubiquitin conjugating enzyme protein, putative, expressed K10581: ubiquitin-conjugating enzyme E2 O
10 Sobic.006G139000 carboxyvinyl-carboxyphosphonate phosphorylmutase, putative, expressed -
11 Sobic.002G164200 PFT1, putative, expressed K15168: mediator of RNA polymerase II transcription subunit 25
12 Sobic.010G134400 diacylglycerol O-acyltransferase, putative, expressed K14457: MOGAT2, 2-acylglycerol O-acyltransferase 2
13 Sobic.002G346400 transmembrane protein 49, putative, expressed -
14 Sobic.001G430400 Ser/Thr protein phosphatase family protein, putative, expressed -
15 Sobic.003G046300 ubiquitin carboxyl-terminal hydrolase 14, putative, expressed K11836: USP5_13, ubiquitin carboxyl-terminal hydrolase 5/13
16 Sobic.008G002300 ATSIZ1/SIZ1, putative, expressed -
17 Sobic.003G226200 neutral ceramidase precursor, putative, expressed K12349: neutral ceramidase
18 Sobic.001G279100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@CW7, putative, expressed -
19 Sobic.002G058500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@FAD-linked oxidoreductase protein, putative, expressed K18204: D-2-hydroxyglutarate dehydrogenase
20 Sobic.009G030400 eyes absent homolog 4, putative, expressed -


Gene co-expression network
sample Sobic009G069000 Sobic009G069000 Sobic007G028100 Sobic007G028100 Sobic009G069000--Sobic007G028100 Sobic007G000200 Sobic007G000200 Sobic009G069000--Sobic007G000200 Sobic006G179400 Sobic006G179400 Sobic009G069000--Sobic006G179400 Sobic006G139100 Sobic006G139100 Sobic009G069000--Sobic006G139100 Sobic001G265600 Sobic001G265600 Sobic009G069000--Sobic001G265600 Sobic001G293700 Sobic001G293700 Sobic009G069000--Sobic001G293700 Sobic002G245000 Sobic002G245000 Sobic009G069000--Sobic002G245000 Sobic005G197100 Sobic005G197100 Sobic009G069000--Sobic005G197100 Sobic003G089000 Sobic003G089000 Sobic009G069000--Sobic003G089000 Sobic002G314900 Sobic002G314900 Sobic007G028100--Sobic002G314900 Sobic004G237400 Sobic004G237400 Sobic007G028100--Sobic004G237400 Sobic007G028100--Sobic007G000200 Sobic006G115466 Sobic006G115466 Sobic007G028100--Sobic006G115466 Sobic007G028100--Sobic003G089000 Sobic006G004500 Sobic006G004500 Sobic007G028100--Sobic006G004500 Sobic001G436900 Sobic001G436900 Sobic007G028100--Sobic001G436900 Sobic002G382600 Sobic002G382600 Sobic007G028100--Sobic002G382600 Sobic007G028100--Sobic009G069000 Sobic006G032300 Sobic006G032300 Sobic007G000200--Sobic006G032300 Sobic003G046300 Sobic003G046300 Sobic007G000200--Sobic003G046300 Sobic008G002300 Sobic008G002300 Sobic007G000200--Sobic008G002300 Sobic007G000200--Sobic002G245000 Sobic001G430400 Sobic001G430400 Sobic007G000200--Sobic001G430400 Sobic002G164200 Sobic002G164200 Sobic007G000200--Sobic002G164200 Sobic007G000200--Sobic003G089000 Sobic001G542450 Sobic001G542450 Sobic007G000200--Sobic001G542450 Sobic006G088200 Sobic006G088200 Sobic007G000200--Sobic006G088200 Sobic003G161800 Sobic003G161800 Sobic006G179400--Sobic003G161800 Sobic006G015500 Sobic006G015500 Sobic006G179400--Sobic006G015500 Sobic006G179400--Sobic009G069000 Sobic006G061100 Sobic006G061100 Sobic006G179400--Sobic006G061100 Sobic004G075700 Sobic004G075700 Sobic006G179400--Sobic004G075700 Sobic009G030400 Sobic009G030400 Sobic006G179400--Sobic009G030400 Sobic003G180100 Sobic003G180100 Sobic006G179400--Sobic003G180100 Sobic001G373700 Sobic001G373700 Sobic006G179400--Sobic001G373700 Sobic006G022200 Sobic006G022200 Sobic006G179400--Sobic006G022200 Sobic004G145000 Sobic004G145000 Sobic006G139100--Sobic004G145000 Sobic002G313900 Sobic002G313900 Sobic006G139100--Sobic002G313900 Sobic007G042900 Sobic007G042900 Sobic006G139100--Sobic007G042900 Sobic003G150900 Sobic003G150900 Sobic006G139100--Sobic003G150900 Sobic003G227100 Sobic003G227100 Sobic006G139100--Sobic003G227100 Sobic001G005600 Sobic001G005600 Sobic006G139100--Sobic001G005600 Sobic003G050900 Sobic003G050900 Sobic006G139100--Sobic003G050900 Sobic002G150700 Sobic002G150700 Sobic006G139100--Sobic002G150700 Sobic006G139100--Sobic003G046300 Sobic003G226200 Sobic003G226200 Sobic001G265600--Sobic003G226200 Sobic002G415900 Sobic002G415900 Sobic001G265600--Sobic002G415900 Sobic008G186200 Sobic008G186200 Sobic001G265600--Sobic008G186200 Sobic010G134400 Sobic010G134400 Sobic001G265600--Sobic010G134400 Sobic002G058500 Sobic002G058500 Sobic001G265600--Sobic002G058500 Sobic001G265600--Sobic009G069000 Sobic003G280300 Sobic003G280300 Sobic001G265600--Sobic003G280300 Sobic005G079900 Sobic005G079900 Sobic001G265600--Sobic005G079900 Sobic009G234800 Sobic009G234800 Sobic001G265600--Sobic009G234800 Sobic001G293700--Sobic009G069000 Sobic002G029100 Sobic002G029100 Sobic001G293700--Sobic002G029100 Sobic001G293700--Sobic001G430400 Sobic001G293700--Sobic007G000200 Sobic009G255600 Sobic009G255600 Sobic001G293700--Sobic009G255600 Sobic001G111800 Sobic001G111800 Sobic001G293700--Sobic001G111800 Sobic004G317300 Sobic004G317300 Sobic001G293700--Sobic004G317300 Sobic001G293700--Sobic008G002300 Sobic007G018400 Sobic007G018400 Sobic001G293700--Sobic007G018400 Sobic003G212900 Sobic003G212900 Sobic002G245000--Sobic003G212900 Sobic002G245000--Sobic007G000200 Sobic002G245000--Sobic002G029100 Sobic002G245000--Sobic001G542450 Sobic001G135500 Sobic001G135500 Sobic002G245000--Sobic001G135500 Sobic003G062300 Sobic003G062300 Sobic002G245000--Sobic003G062300 Sobic002G245000--Sobic008G002300 Sobic009G020500 Sobic009G020500 Sobic002G245000--Sobic009G020500 Sobic002G245000--Sobic006G032300 Sobic009G166600 Sobic009G166600 Sobic005G197100--Sobic009G166600 Sobic009G212600 Sobic009G212600 Sobic005G197100--Sobic009G212600 Sobic004G160700 Sobic004G160700 Sobic005G197100--Sobic004G160700 Sobic002G292900 Sobic002G292900 Sobic005G197100--Sobic002G292900 Sobic005G197100--Sobic001G005600 Sobic005G197100--Sobic003G150900 Sobic005G197100--Sobic002G313900 Sobic008G021000 Sobic008G021000 Sobic005G197100--Sobic008G021000 Sobic005G197100--Sobic006G139100 Sobic004G177300 Sobic004G177300 Sobic003G089000--Sobic004G177300 Sobic003G089000--Sobic006G032300 Sobic002G335600 Sobic002G335600 Sobic003G089000--Sobic002G335600 Sobic010G072800 Sobic010G072800 Sobic003G089000--Sobic010G072800 Sobic001G273700 Sobic001G273700 Sobic003G089000--Sobic001G273700 Sobic002G142900 Sobic002G142900 Sobic003G089000--Sobic002G142900 Sobic001G263600 Sobic001G263600 Sobic003G089000--Sobic001G263600 Sobic001G375600 Sobic001G375600 Sobic003G089000--Sobic001G375600 Sobic003G089000--Sobic007G000200
Octagon: transcription factors


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