Gene annotation
Transcriptome id Sobic.006G038000.3,Sobic.006G038000.10,Sobic.006G038000.2,Sobic.006G038000.7,Sobic.006G038000.5,Sobic.006G038000.4,Sobic.006G038000.8,Sobic.006G038000.9,Sobic.006G038000.11,Sobic.006G038000.6,Sobic.006G038000.1
Synonym
Functional annotation expressed protein
UniProt A0A1Z5RCX0 , A0A1B6PJX5 , A0A1B6PJX7 , A0A1Z5RD37 , A0A1Z5RC64 , A0A1Z5RC03 , A0A1B6PJY3 , A0A1B6PJW8 , A0A1B6PJW1 , A0A1B6PJW6 , A0A1Z5RC33
Pfam PF13374 PF13424 PF13424
Panther DB PTHR19959 PTHR19959:SF159
NCBI CDD KOG1840; Kinesin light chain
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G37590 : Tetratricopeptide repeat (TPR)-like superfamily protein
RAP-DB (Rice) LOC_Os04g20960.1 : expressed protein
MaizeGDB (Corn) Zm00025a017527 , Zm00025a017512
Brachypodium KQK22816 , KQK22817 , KQK22814 , KQK22815 , PNT77851 , KQK22819 , KQK22818 , KQK22821 , KQK22820
Barley HORVU4Hr1G066530.19 , HORVU4Hr1G066530.9 , HORVU4Hr1G066530.6 , HORVU4Hr1G066530.7 , HORVU4Hr1G066530.4 , HORVU4Hr1G066530.5 , HORVU4Hr1G066530.2 , HORVU4Hr1G066530.3 , HORVU4Hr1G066530.1 , HORVU4Hr1G066530.15 , HORVU4Hr1G066530.16 , HORVU4Hr1G066530.17 , HORVU4Hr1G066530.10 , HORVU4Hr1G066530.11 , HORVU4Hr1G066530.12 , HORVU4Hr1G066530.13 , HORVU4Hr1G066530.18 , HORVU4Hr1G066530.21 , HORVU4Hr1G066530.20 , HORVU4Hr1G066530.22
Wheat TraesCS4D02G240100 , TraesCS4B02G240300 , TraesCS4B02G240300 , TraesCS7D02G070000 , TraesCS4A02G063300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G260500 tetratricopeptide repeat containing protein, putative, expressed K14408: CSTF3, cleavage stimulation factor subunit 3
2 Sobic.004G048800 - K12599: SKI2, antiviral helicase SKI2
3 Sobic.001G219600 importin-beta N-terminal domain containing protein, expressed K15436: TRPO3, transportin-3
4 Sobic.001G020000 metallo-beta-lactamase, putative, expressed K14402: CPSF2, cleavage and polyadenylation specificity factor subunit 2
5 Sobic.002G317200 uncharacterized ACR, COG1590 family protein, expressed K15450: tRNA wybutosine-synthesizing protein 3
6 Sobic.009G247400 PX domain containing protein, putative, expressed K17925: sorting nexin-13
7 Sobic.010G279450 - K11446: KDM5, [histone H3]-trimethyl-L-lysine4 demethylase
8 Sobic.006G039800 ATP-binding region, ATPase-like domain containing protein, expressed -
9 Sobic.001G352900 intron-binding protein aquarius, putative, expressed K12874: intron-binding protein aquarius
10 Sobic.007G090430 - -
11 Sobic.008G028700 SET domain containing protein, expressed -
12 Sobic.009G040600 expressed protein K11647: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4
13 Sobic.003G101500 dnaJ domain containing protein, expressed -
14 Sobic.001G167200 DNA-directed polymerase, putative, expressed K03511: DNA polymerase kappa
15 Sobic.004G314000 expressed protein -
16 Sobic.010G136600 - -
17 Sobic.004G242400 nuclear-pore anchor, putative, expressed K09291: TPR, MLP1, nucleoprotein TPR
18 Sobic.006G216800 AAA family ATPase, putative, expressed K13339: PEX6, peroxin-6
19 Sobic.008G009700 WD domain and HEAT domain containing protein, putative, expressed K07204: regulatory associated protein of mTOR
20 Sobic.010G139000 surp module family protein, putative, expressed K13123: G patch domain-containing protein 1


Gene co-expression network
sample Sobic006G038000 Sobic006G038000 Sobic009G260500 Sobic009G260500 Sobic006G038000--Sobic009G260500 Sobic004G048800 Sobic004G048800 Sobic006G038000--Sobic004G048800 Sobic001G219600 Sobic001G219600 Sobic006G038000--Sobic001G219600 Sobic001G020000 Sobic001G020000 Sobic006G038000--Sobic001G020000 Sobic002G317200 Sobic002G317200 Sobic006G038000--Sobic002G317200 Sobic009G247400 Sobic009G247400 Sobic006G038000--Sobic009G247400 Sobic010G279450 Sobic010G279450 Sobic006G038000--Sobic010G279450 Sobic006G039800 Sobic006G039800 Sobic006G038000--Sobic006G039800 Sobic001G352900 Sobic001G352900 Sobic006G038000--Sobic001G352900 Sobic009G260500--Sobic001G219600 Sobic004G009600 Sobic004G009600 Sobic009G260500--Sobic004G009600 Sobic010G277500 Sobic010G277500 Sobic009G260500--Sobic010G277500 Sobic008G009700 Sobic008G009700 Sobic009G260500--Sobic008G009700 Sobic010G139000 Sobic010G139000 Sobic009G260500--Sobic010G139000 Sobic008G028700 Sobic008G028700 Sobic009G260500--Sobic008G028700 Sobic009G040600 Sobic009G040600 Sobic009G260500--Sobic009G040600 Sobic002G309600 Sobic002G309600 Sobic009G260500--Sobic002G309600 Sobic001G311500 Sobic001G311500 Sobic009G260500--Sobic001G311500 Sobic008G098300 Sobic008G098300 Sobic004G048800--Sobic008G098300 Sobic001G398800 Sobic001G398800 Sobic004G048800--Sobic001G398800 Sobic004G242400 Sobic004G242400 Sobic004G048800--Sobic004G242400 Sobic010G001100 Sobic010G001100 Sobic004G048800--Sobic010G001100 Sobic003G360400 Sobic003G360400 Sobic004G048800--Sobic003G360400 Sobic001G363500 Sobic001G363500 Sobic004G048800--Sobic001G363500 Sobic004G048800--Sobic002G317200 Sobic001G433800 Sobic001G433800 Sobic004G048800--Sobic001G433800 Sobic005G112300 Sobic005G112300 Sobic004G048800--Sobic005G112300 Sobic001G219600--Sobic009G260500 Sobic001G219600--Sobic002G309600 Sobic001G219600--Sobic002G317200 Sobic009G047200 Sobic009G047200 Sobic001G219600--Sobic009G047200 Sobic003G141500 Sobic003G141500 Sobic001G219600--Sobic003G141500 Sobic001G219600--Sobic010G139000 Sobic001G071400 Sobic001G071400 Sobic001G219600--Sobic001G071400 Sobic002G397500 Sobic002G397500 Sobic001G219600--Sobic002G397500 Sobic001G219600--Sobic001G020000 Sobic001G020000--Sobic001G219600 Sobic001G020000--Sobic001G433800 Sobic001G020000--Sobic002G317200 Sobic001G354600 Sobic001G354600 Sobic001G020000--Sobic001G354600 Sobic001G087600 Sobic001G087600 Sobic001G020000--Sobic001G087600 Sobic002G425500 Sobic002G425500 Sobic001G020000--Sobic002G425500 Sobic003G095900 Sobic003G095900 Sobic001G020000--Sobic003G095900 Sobic001G020000--Sobic001G352900 Sobic004G124300 Sobic004G124300 Sobic001G020000--Sobic004G124300 Sobic002G317200--Sobic004G048800 Sobic002G317200--Sobic001G219600 Sobic004G314000 Sobic004G314000 Sobic002G317200--Sobic004G314000 Sobic002G317200--Sobic001G433800 Sobic002G317200--Sobic003G095900 Sobic002G317200--Sobic004G242400 Sobic002G317200--Sobic002G397500 Sobic002G317200--Sobic005G112300 Sobic002G317200--Sobic009G260500 Sobic009G247400--Sobic001G311500 Sobic009G247400--Sobic010G279450 Sobic009G247400--Sobic009G260500 Sobic009G247400--Sobic004G009600 Sobic001G214600 Sobic001G214600 Sobic009G247400--Sobic001G214600 Sobic009G247400--Sobic001G363500 Sobic009G247400--Sobic001G219600 Sobic009G247400--Sobic002G317200 Sobic009G247400--Sobic004G314000 Sobic010G279450--Sobic005G112300 Sobic010G279450--Sobic010G139000 Sobic002G405800 Sobic002G405800 Sobic010G279450--Sobic002G405800 Sobic010G279450--Sobic004G314000 Sobic003G059750 Sobic003G059750 Sobic010G279450--Sobic003G059750 Sobic010G279450--Sobic008G028700 Sobic010G279450--Sobic001G363500 Sobic010G279450--Sobic004G009600 Sobic010G247800 Sobic010G247800 Sobic010G279450--Sobic010G247800 Sobic006G039800--Sobic004G048800 Sobic002G154000 Sobic002G154000 Sobic006G039800--Sobic002G154000 Sobic003G101500 Sobic003G101500 Sobic006G039800--Sobic003G101500 Sobic007G090430 Sobic007G090430 Sobic006G039800--Sobic007G090430 Sobic006G210000 Sobic006G210000 Sobic006G039800--Sobic006G210000 Sobic006G039800--Sobic009G040600 Sobic006G039800--Sobic010G001100 Sobic004G049700 Sobic004G049700 Sobic006G039800--Sobic004G049700 Sobic006G039800--Sobic001G398800 Sobic010G053600 Sobic010G053600 Sobic001G352900--Sobic010G053600 Sobic002G391600 Sobic002G391600 Sobic001G352900--Sobic002G391600 Sobic001G352900--Sobic004G242400 Sobic001G352900--Sobic010G001100 Sobic009G109200 Sobic009G109200 Sobic001G352900--Sobic009G109200 Sobic001G352900--Sobic002G317200 Sobic001G352900--Sobic002G397500 Sobic001G352900--Sobic001G219600 Sobic003G293200 Sobic003G293200 Sobic001G352900--Sobic003G293200
Octagon: transcription factors


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