Gene annotation
Transcriptome id Sobic.006G079350.1
Synonym -
Functional annotation -
UniProt A0A1Z5RCY5
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G124000 pinin/SDK/memA protein, putative, expressed K13114: pinin
2 Sobic.001G035900 expressed protein K13156: U11/U12 small nuclear ribonucleoprotein 48 kDa protein
3 Sobic.002G228700 patatin, putative, expressed -
4 Sobic.001G274200 RNA recognition motif containing protein, putative, expressed K11093: U1 small nuclear ribonucleoprotein 70kDa
5 Sobic.001G420200 RNA recognition motif containing protein, putative, expressed K11093: U1 small nuclear ribonucleoprotein 70kDa
6 Sobic.003G383300 RNA polymerase III RPC4 domain containing protein, expressed K03026: RPC4, DNA-directed RNA polymerase III subunit RPC4
7 Sobic.009G024400 ZOS5-03 - C2H2 zinc finger protein, expressed K09191: general transcription factor IIIA
8 Sobic.004G208900 RNA-binding protein Luc7-like, putative, expressed -
9 Sobic.002G144933 - -
10 Sobic.006G228500 coiled-coil domain-containing protein, putative, expressed K13115: coiled-coil domain-containing protein 130
11 Sobic.010G277500 expressed protein -
12 Sobic.004G258700 PHD-finger family protein, expressed -
13 Sobic.007G113800 early-responsive to dehydration protein-related, putative, expressed -
14 Sobic.007G037900 oxidoreductase family, NAD-binding Rossmann fold containing protein, expressed -
15 Sobic.009G034200 CBL-interacting protein kinase 1(PubMedID : 26320239)@Interacting factor of CBLs(PubMedID : 19860013)@CAMK_KIN1/SNF1/Nim1_like.3 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K07198: PRKAA, 5'-AMP-activated protein kinase, catalytic alpha subunit
16 Sobic.002G248400 ENT domain containing protein, expressed -
17 Sobic.002G031400 OsFBL39 - F-box domain and LRR containing protein, expressed -
18 Sobic.004G174400 ZOS2-09 - C2H2 zinc finger protein, expressed -
19 Sobic.009G102500 - -
20 Sobic.003G386600 calreticulin precursor protein, putative, expressed K08057: calreticulin


Gene co-expression network
sample Sobic006G079350 Sobic006G079350 Sobic001G124000 Sobic001G124000 Sobic006G079350--Sobic001G124000 Sobic001G035900 Sobic001G035900 Sobic006G079350--Sobic001G035900 Sobic002G228700 Sobic002G228700 Sobic006G079350--Sobic002G228700 Sobic001G274200 Sobic001G274200 Sobic006G079350--Sobic001G274200 Sobic001G420200 Sobic001G420200 Sobic006G079350--Sobic001G420200 Sobic003G383300 Sobic003G383300 Sobic006G079350--Sobic003G383300 Sobic009G024400 Sobic009G024400 Sobic006G079350--Sobic009G024400 Sobic004G208900 Sobic004G208900 Sobic006G079350--Sobic004G208900 Sobic002G144933 Sobic002G144933 Sobic006G079350--Sobic002G144933 Sobic001G124000--Sobic009G024400 Sobic004G039200 Sobic004G039200 Sobic001G124000--Sobic004G039200 Sobic008G113100 Sobic008G113100 Sobic001G124000--Sobic008G113100 Sobic001G124000--Sobic004G208900 Sobic001G227200 Sobic001G227200 Sobic001G124000--Sobic001G227200 Sobic007G117400 Sobic007G117400 Sobic001G124000--Sobic007G117400 Sobic009G065100 Sobic009G065100 Sobic001G124000--Sobic009G065100 Sobic010G277500 Sobic010G277500 Sobic001G124000--Sobic010G277500 Sobic008G011100 Sobic008G011100 Sobic001G124000--Sobic008G011100 Sobic003G254000 Sobic003G254000 Sobic001G035900--Sobic003G254000 Sobic002G031400 Sobic002G031400 Sobic001G035900--Sobic002G031400 Sobic002G064750 Sobic002G064750 Sobic001G035900--Sobic002G064750 Sobic007G099100 Sobic007G099100 Sobic001G035900--Sobic007G099100 Sobic001G035900--Sobic001G274200 Sobic003G429650 Sobic003G429650 Sobic001G035900--Sobic003G429650 Sobic010G176550 Sobic010G176550 Sobic001G035900--Sobic010G176550 Sobic007G161000 Sobic007G161000 Sobic001G035900--Sobic007G161000 Sobic009G024000 Sobic009G024000 Sobic001G035900--Sobic009G024000 Sobic004G258700 Sobic004G258700 Sobic002G228700--Sobic004G258700 Sobic007G113800 Sobic007G113800 Sobic002G228700--Sobic007G113800 Sobic006G079400 Sobic006G079400 Sobic002G228700--Sobic006G079400 Sobic009G191100 Sobic009G191100 Sobic002G228700--Sobic009G191100 Sobic007G225800 Sobic007G225800 Sobic002G228700--Sobic007G225800 Sobic002G380500 Sobic002G380500 Sobic002G228700--Sobic002G380500 Sobic003G011900 Sobic003G011900 Sobic002G228700--Sobic003G011900 Sobic003G148000 Sobic003G148000 Sobic002G228700--Sobic003G148000 Sobic002G228700--Sobic003G429650 Sobic001G274200--Sobic001G420200 Sobic007G096600 Sobic007G096600 Sobic001G274200--Sobic007G096600 Sobic003G268300 Sobic003G268300 Sobic001G274200--Sobic003G268300 Sobic008G173900 Sobic008G173900 Sobic001G274200--Sobic008G173900 Sobic001G274200--Sobic002G144933 Sobic001G133466 Sobic001G133466 Sobic001G274200--Sobic001G133466 Sobic007G037900 Sobic007G037900 Sobic001G274200--Sobic007G037900 Sobic002G243900 Sobic002G243900 Sobic001G274200--Sobic002G243900 Sobic010G123901 Sobic010G123901 Sobic001G274200--Sobic010G123901 Sobic001G420200--Sobic001G274200 Sobic002G157000 Sobic002G157000 Sobic001G420200--Sobic002G157000 Sobic001G420200--Sobic003G268300 Sobic001G420200--Sobic008G173900 Sobic002G248400 Sobic002G248400 Sobic001G420200--Sobic002G248400 Sobic001G420200--Sobic007G096600 Sobic001G420200--Sobic007G037900 Sobic001G420200--Sobic002G144933 Sobic007G178700 Sobic007G178700 Sobic001G420200--Sobic007G178700 Sobic007G052900 Sobic007G052900 Sobic003G383300--Sobic007G052900 Sobic004G027800 Sobic004G027800 Sobic003G383300--Sobic004G027800 Sobic008G136200 Sobic008G136200 Sobic003G383300--Sobic008G136200 Sobic006G085300 Sobic006G085300 Sobic003G383300--Sobic006G085300 Sobic003G383300--Sobic010G277500 Sobic006G258500 Sobic006G258500 Sobic003G383300--Sobic006G258500 Sobic003G383300--Sobic007G037900 Sobic003G383300--Sobic002G144933 Sobic006G246900 Sobic006G246900 Sobic003G383300--Sobic006G246900 Sobic009G024400--Sobic001G124000 Sobic009G024400--Sobic001G227200 Sobic007G159900 Sobic007G159900 Sobic009G024400--Sobic007G159900 Sobic003G266001 Sobic003G266001 Sobic009G024400--Sobic003G266001 Sobic004G140600 Sobic004G140600 Sobic009G024400--Sobic004G140600 Sobic005G106500 Sobic005G106500 Sobic009G024400--Sobic005G106500 Sobic009G132700 Sobic009G132700 Sobic009G024400--Sobic009G132700 Sobic009G024400--Sobic008G113100 Sobic003G170900 Sobic003G170900 Sobic009G024400--Sobic003G170900 Sobic009G040600 Sobic009G040600 Sobic004G208900--Sobic009G040600 Sobic004G208900--Sobic010G277500 Sobic003G052200 Sobic003G052200 Sobic004G208900--Sobic003G052200 Sobic010G139000 Sobic010G139000 Sobic004G208900--Sobic010G139000 Sobic004G208900--Sobic008G113100 Sobic002G006900 Sobic002G006900 Sobic004G208900--Sobic002G006900 Sobic008G028700 Sobic008G028700 Sobic004G208900--Sobic008G028700 Sobic003G280800 Sobic003G280800 Sobic004G208900--Sobic003G280800 Sobic009G126400 Sobic009G126400 Sobic004G208900--Sobic009G126400 Sobic002G144933--Sobic008G173900 Sobic002G144933--Sobic002G157000 Sobic002G144933--Sobic001G420200 Sobic002G144933--Sobic003G268300 Sobic002G144933--Sobic001G274200 Sobic002G144933--Sobic007G037900 Sobic004G145500 Sobic004G145500 Sobic002G144933--Sobic004G145500 Sobic003G170100 Sobic003G170100 Sobic002G144933--Sobic003G170100 Sobic002G144933--Sobic009G065100
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.