Gene annotation
Transcriptome id Sobic.006G149800.1
Synonym Sb06g022830
Functional annotation PPR repeat domain containing protein, putative, expressed
UniProt C5YCE5
Pfam PF13812 PF01535 PF12854
Panther DB PTHR24015 PTHR24015:SF821
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G77360 : Tetratricopeptide repeat (TPR)-like superfamily protein
RAP-DB (Rice) LOC_Os04g44030.1 : PPR repeat domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a010643 , Zm00025a055496 , Zm00025a032606 , Zm00025a032607 , Zm00025a053137 , Zm00025a049985 , Zm00025a023846 , Zm00025a023845 , Zm00025a051246
Brachypodium KQJ83643 , KQJ83642 , PNT61497 , PNT61499 , PNT61500 , PNT61498 , PNT61502 , PNT61503 , PNT61501
Barley HORVU2Hr1G089830.2 , HORVU2Hr1G089830.3 , HORVU2Hr1G089830.1
Wheat -
Populus -


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cDNA sequences
Sobic.006G149800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G178700 NBS-LRR disease resistance protein, putative, expressed -
2 Sobic.004G113400 cyclic nucleotide-gated ion channel 1, putative, expressed K05391: cyclic nucleotide gated channel, plant
3 Sobic.002G430000 expressed protein K08518: STXBP5, syntaxin-binding protein 5
4 Sobic.003G259100 GPI transamidase component family protein, putative, expressed K05289: GPI-anchor transamidase subunit GAA1
5 Sobic.004G355000 SAC9, putative, expressed -
6 Sobic.006G279200 expressed protein K11789: DCAF1, DDB1- and CUL4-associated factor 1
7 Sobic.002G155301 - -
8 Sobic.001G534800 Putative ortholog gene associated with awn presence/absence in wheat(PubMedID : 25237112)@adapitin protein, putative, expressed K11824: AP-2 complex subunit alpha
9 Sobic.002G156000 -(PubMedID : 29751546)@transporter, monovalent cation:proton antiporter-2 family, putative, expressed K14724: SLC9A8, solute carrier family 9 (sodium/hydrogen exchanger), member 8
10 Sobic.001G347500 expressed protein -
11 Sobic.001G224600 peroxisome assembly protein 12, putative, expressed K13345: PEX12, peroxin-12
12 Sobic.004G004200 expressed protein -
13 Sobic.003G229500 ZOS12-01 - C2H2 zinc finger protein, expressed -
14 Sobic.001G058700 XRN 5\'-3\' exonuclease N-terminus domain containing protein, expressed K12619: XRN2, 5'-3' exoribonuclease 2
15 Sobic.004G339100 endoribonuclease, putative, expressed K06927: diphthine-ammonia ligase
16 Sobic.004G347400 pumilio-family RNA binding protein, putative, expressed K17943: pumilio RNA-binding family
17 Sobic.001G281100 START domain containing protein, expressed -
18 Sobic.004G329400 formin, putative, expressed -
19 Sobic.008G099800 expressed protein -
20 Sobic.001G146800 expressed protein -


Gene co-expression network
sample Sobic006G149800 Sobic006G149800 Sobic001G178700 Sobic001G178700 Sobic006G149800--Sobic001G178700 Sobic004G113400 Sobic004G113400 Sobic006G149800--Sobic004G113400 Sobic002G430000 Sobic002G430000 Sobic006G149800--Sobic002G430000 Sobic003G259100 Sobic003G259100 Sobic006G149800--Sobic003G259100 Sobic004G355000 Sobic004G355000 Sobic006G149800--Sobic004G355000 Sobic006G279200 Sobic006G279200 Sobic006G149800--Sobic006G279200 Sobic002G155301 Sobic002G155301 Sobic006G149800--Sobic002G155301 Sobic001G534800 Sobic001G534800 Sobic006G149800--Sobic001G534800 Sobic002G156000 Sobic002G156000 Sobic006G149800--Sobic002G156000 Sobic001G178700--Sobic004G113400 Sobic009G010600 Sobic009G010600 Sobic001G178700--Sobic009G010600 Sobic001G248300 Sobic001G248300 Sobic001G178700--Sobic001G248300 Sobic001G291000 Sobic001G291000 Sobic001G178700--Sobic001G291000 Sobic001G474600 Sobic001G474600 Sobic001G178700--Sobic001G474600 Sobic001G146800 Sobic001G146800 Sobic001G178700--Sobic001G146800 Sobic010G112000 Sobic010G112000 Sobic001G178700--Sobic010G112000 Sobic007G172400 Sobic007G172400 Sobic001G178700--Sobic007G172400 Sobic004G329400 Sobic004G329400 Sobic001G178700--Sobic004G329400 Sobic004G113400--Sobic009G010600 Sobic003G408600 Sobic003G408600 Sobic004G113400--Sobic003G408600 Sobic004G113400--Sobic004G329400 Sobic001G058700 Sobic001G058700 Sobic004G113400--Sobic001G058700 Sobic008G099800 Sobic008G099800 Sobic004G113400--Sobic008G099800 Sobic004G113400--Sobic001G178700 Sobic001G117200 Sobic001G117200 Sobic004G113400--Sobic001G117200 Sobic004G113400--Sobic001G534800 Sobic004G113400--Sobic002G430000 Sobic001G207400 Sobic001G207400 Sobic002G430000--Sobic001G207400 Sobic002G430000--Sobic001G117200 Sobic002G430000--Sobic004G355000 Sobic008G098900 Sobic008G098900 Sobic002G430000--Sobic008G098900 Sobic001G016700 Sobic001G016700 Sobic002G430000--Sobic001G016700 Sobic002G430000--Sobic004G113400 Sobic010G139600 Sobic010G139600 Sobic002G430000--Sobic010G139600 Sobic008G092600 Sobic008G092600 Sobic002G430000--Sobic008G092600 Sobic003G110000 Sobic003G110000 Sobic002G430000--Sobic003G110000 Sobic003G259100--Sobic004G113400 Sobic003G259100--Sobic008G099800 Sobic001G050600 Sobic001G050600 Sobic003G259100--Sobic001G050600 Sobic003G072200 Sobic003G072200 Sobic003G259100--Sobic003G072200 Sobic001G273700 Sobic001G273700 Sobic003G259100--Sobic001G273700 Sobic003G259100--Sobic001G058700 Sobic001G347500 Sobic001G347500 Sobic003G259100--Sobic001G347500 Sobic001G219900 Sobic001G219900 Sobic003G259100--Sobic001G219900 Sobic010G034000 Sobic010G034000 Sobic003G259100--Sobic010G034000 Sobic004G355000--Sobic001G207400 Sobic004G355000--Sobic002G430000 Sobic004G355000--Sobic001G248300 Sobic005G001000 Sobic005G001000 Sobic004G355000--Sobic005G001000 Sobic004G355000--Sobic004G329400 Sobic005G157000 Sobic005G157000 Sobic004G355000--Sobic005G157000 Sobic003G322700 Sobic003G322700 Sobic004G355000--Sobic003G322700 Sobic004G355000--Sobic004G113400 Sobic004G355000--Sobic009G010600 Sobic005G028600 Sobic005G028600 Sobic006G279200--Sobic005G028600 Sobic001G037100 Sobic001G037100 Sobic006G279200--Sobic001G037100 Sobic003G229500 Sobic003G229500 Sobic006G279200--Sobic003G229500 Sobic006G279200--Sobic002G430000 Sobic006G279200--Sobic001G117200 Sobic003G247300 Sobic003G247300 Sobic006G279200--Sobic003G247300 Sobic003G246100 Sobic003G246100 Sobic006G279200--Sobic003G246100 Sobic001G050200 Sobic001G050200 Sobic006G279200--Sobic001G050200 Sobic006G279200--Sobic001G058700 Sobic002G155301--Sobic002G430000 Sobic002G155301--Sobic001G117200 Sobic007G133700 Sobic007G133700 Sobic002G155301--Sobic007G133700 Sobic003G422500 Sobic003G422500 Sobic002G155301--Sobic003G422500 Sobic001G281100 Sobic001G281100 Sobic002G155301--Sobic001G281100 Sobic004G004200 Sobic004G004200 Sobic002G155301--Sobic004G004200 Sobic002G155301--Sobic008G098900 Sobic008G087866 Sobic008G087866 Sobic002G155301--Sobic008G087866 Sobic002G155301--Sobic004G113400 Sobic001G534800--Sobic001G281100 Sobic001G534800--Sobic008G099800 Sobic004G004300 Sobic004G004300 Sobic001G534800--Sobic004G004300 Sobic004G135400 Sobic004G135400 Sobic001G534800--Sobic004G135400 Sobic005G003300 Sobic005G003300 Sobic001G534800--Sobic005G003300 Sobic005G026200 Sobic005G026200 Sobic001G534800--Sobic005G026200 Sobic006G012500 Sobic006G012500 Sobic001G534800--Sobic006G012500 Sobic001G534800--Sobic004G113400 Sobic001G065000 Sobic001G065000 Sobic001G534800--Sobic001G065000 Sobic001G413900 Sobic001G413900 Sobic002G156000--Sobic001G413900 Sobic010G072800 Sobic010G072800 Sobic002G156000--Sobic010G072800 Sobic004G209800 Sobic004G209800 Sobic002G156000--Sobic004G209800 Sobic002G156000--Sobic004G004200 Sobic004G261600 Sobic004G261600 Sobic002G156000--Sobic004G261600 Sobic004G236200 Sobic004G236200 Sobic002G156000--Sobic004G236200 Sobic004G016000 Sobic004G016000 Sobic002G156000--Sobic004G016000 Sobic002G156000--Sobic002G430000 Sobic002G156000--Sobic001G281100
Octagon: transcription factors


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