Gene annotation
Transcriptome id Sobic.006G177200.1
Synonym FLD, Sb06g025190
Functional annotation amine oxidase, putative, expressed
UniProt C5YDX6
Pfam PF04433 PF13450
Panther DB PTHR10742 PTHR10742:SF260
NCBI CDD KOG0029; Amine oxidase
KEGG Orthology K11450; KDM1A, AOF2, [histone H3]-N6,N6-dimethyl-L-lysine4 FAD-dependent demethylase
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT3G10390 : Flavin containing amine oxidoreductase family protein
RAP-DB (Rice) LOC_Os04g47270.1 : amine oxidase, putative, expressed
MaizeGDB (Corn) Zm00025a010226
Brachypodium KQJ84025
Barley HORVU2Hr1G096300.1 , HORVU1Hr1G057320.1
Wheat TraesCS2B02G425100 , TraesCS2A02G407400 , TraesCS2D02G404400
Populus -


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cDNA sequences
Sobic.006G177200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G313400 tRNA-splicing endonuclease positive effector-related, putative, expressed K10706: SETX, senataxin
2 Sobic.002G400800 expressed protein -
3 Sobic.002G340000 FAR1 family protein, expressed -
4 Sobic.008G054600 splicing factor, putative, expressed -
5 Sobic.004G357100 expressed protein -
6 Sobic.009G260650 - -
7 Sobic.002G263700 bromodomain protein 103, putative, expressed -
8 Sobic.004G122900 gamma-secretase subunit APH-1B, putative, expressed -
9 Sobic.003G182300 zinc finger family protein, putative, expressed K16284: E3 ubiquitin-protein ligase SIS3
10 Sobic.006G077200 ubiquitin interaction motif-containing protein, putative, expressed -
11 Sobic.001G526300 WD repeat-containing protein, putative, expressed K03364: cell division cycle 20-like protein 1, cofactor of APC complex
12 Sobic.007G105000 - -
13 Sobic.001G308400 expressed protein -
14 Sobic.001G156900 single myb histone, putative, expressed K09422: transcription factor MYB, plant
15 Sobic.003G043000 expressed protein -
16 Sobic.008G080500 expressed protein -
17 Sobic.009G228000 ubiquitin-conjugating enzyme domain containing protein, expressed K10581: ubiquitin-conjugating enzyme E2 O
18 Sobic.006G245900 FAR1 family protein, expressed -
19 Sobic.004G096400 serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B, putative, expressed K04354: serine/threonine-protein phosphatase 2A regulatory subunit B
20 Sobic.006G239400 ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed K11366: USP22_27_51, ubiquitin carboxyl-terminal hydrolase 22/27/51


Gene co-expression network
sample Sobic006G177200 Sobic006G177200 Sobic001G313400 Sobic001G313400 Sobic006G177200--Sobic001G313400 Sobic002G400800 Sobic002G400800 Sobic006G177200--Sobic002G400800 Sobic002G340000 Sobic002G340000 Sobic006G177200--Sobic002G340000 Sobic008G054600 Sobic008G054600 Sobic006G177200--Sobic008G054600 Sobic004G357100 Sobic004G357100 Sobic006G177200--Sobic004G357100 Sobic009G260650 Sobic009G260650 Sobic006G177200--Sobic009G260650 Sobic002G263700 Sobic002G263700 Sobic006G177200--Sobic002G263700 Sobic004G122900 Sobic004G122900 Sobic006G177200--Sobic004G122900 Sobic003G182300 Sobic003G182300 Sobic006G177200--Sobic003G182300 Sobic003G394200 Sobic003G394200 Sobic001G313400--Sobic003G394200 Sobic003G189600 Sobic003G189600 Sobic001G313400--Sobic003G189600 Sobic006G224800 Sobic006G224800 Sobic001G313400--Sobic006G224800 Sobic009G166600 Sobic009G166600 Sobic001G313400--Sobic009G166600 Sobic001G313400--Sobic004G357100 Sobic006G128100 Sobic006G128100 Sobic001G313400--Sobic006G128100 Sobic001G308400 Sobic001G308400 Sobic001G313400--Sobic001G308400 Sobic009G249700 Sobic009G249700 Sobic001G313400--Sobic009G249700 Sobic007G218000 Sobic007G218000 Sobic001G313400--Sobic007G218000 Sobic002G400800--Sobic006G177200 Sobic003G285000 Sobic003G285000 Sobic002G400800--Sobic003G285000 Sobic003G160000 Sobic003G160000 Sobic002G400800--Sobic003G160000 Sobic004G305100 Sobic004G305100 Sobic002G400800--Sobic004G305100 Sobic001G386100 Sobic001G386100 Sobic002G400800--Sobic001G386100 Sobic001G008200 Sobic001G008200 Sobic002G400800--Sobic001G008200 Sobic004G096400 Sobic004G096400 Sobic002G400800--Sobic004G096400 Sobic002G400800--Sobic008G054600 Sobic004G309900 Sobic004G309900 Sobic002G400800--Sobic004G309900 Sobic002G340000--Sobic001G308400 Sobic004G007900 Sobic004G007900 Sobic002G340000--Sobic004G007900 Sobic007G019300 Sobic007G019300 Sobic002G340000--Sobic007G019300 Sobic005G059500 Sobic005G059500 Sobic002G340000--Sobic005G059500 Sobic005G114500 Sobic005G114500 Sobic002G340000--Sobic005G114500 Sobic001G384400 Sobic001G384400 Sobic002G340000--Sobic001G384400 Sobic001G012900 Sobic001G012900 Sobic002G340000--Sobic001G012900 Sobic001G282300 Sobic001G282300 Sobic002G340000--Sobic001G282300 Sobic008G124800 Sobic008G124800 Sobic002G340000--Sobic008G124800 Sobic001G014300 Sobic001G014300 Sobic008G054600--Sobic001G014300 Sobic004G256500 Sobic004G256500 Sobic008G054600--Sobic004G256500 Sobic008G054600--Sobic004G096400 Sobic002G396500 Sobic002G396500 Sobic008G054600--Sobic002G396500 Sobic003G405500 Sobic003G405500 Sobic008G054600--Sobic003G405500 Sobic008G054600--Sobic006G224800 Sobic009G084900 Sobic009G084900 Sobic008G054600--Sobic009G084900 Sobic006G166200 Sobic006G166200 Sobic008G054600--Sobic006G166200 Sobic004G236800 Sobic004G236800 Sobic008G054600--Sobic004G236800 SobicK028600 SobicK028600 Sobic004G357100--SobicK028600 Sobic003G444800 Sobic003G444800 Sobic004G357100--Sobic003G444800 Sobic002G063900 Sobic002G063900 Sobic004G357100--Sobic002G063900 Sobic003G152400 Sobic003G152400 Sobic004G357100--Sobic003G152400 Sobic003G043000 Sobic003G043000 Sobic004G357100--Sobic003G043000 Sobic004G265500 Sobic004G265500 Sobic004G357100--Sobic004G265500 Sobic004G357100--Sobic001G308400 Sobic007G042400 Sobic007G042400 Sobic004G357100--Sobic007G042400 Sobic006G234700 Sobic006G234700 Sobic004G357100--Sobic006G234700 Sobic009G260650--Sobic002G063900 Sobic006G281700 Sobic006G281700 Sobic009G260650--Sobic006G281700 Sobic003G297500 Sobic003G297500 Sobic009G260650--Sobic003G297500 Sobic009G260650--Sobic001G308400 Sobic009G260650--Sobic004G357100 Sobic009G228000 Sobic009G228000 Sobic009G260650--Sobic009G228000 Sobic007G147400 Sobic007G147400 Sobic009G260650--Sobic007G147400 Sobic009G260650--Sobic004G122900 Sobic009G129600 Sobic009G129600 Sobic009G260650--Sobic009G129600 Sobic010G269300 Sobic010G269300 Sobic002G263700--Sobic010G269300 Sobic004G141800 Sobic004G141800 Sobic002G263700--Sobic004G141800 Sobic004G285000 Sobic004G285000 Sobic002G263700--Sobic004G285000 Sobic004G111000 Sobic004G111000 Sobic002G263700--Sobic004G111000 Sobic002G263700--Sobic002G063900 Sobic006G280100 Sobic006G280100 Sobic002G263700--Sobic006G280100 Sobic006G245900 Sobic006G245900 Sobic002G263700--Sobic006G245900 Sobic003G016500 Sobic003G016500 Sobic002G263700--Sobic003G016500 Sobic002G263700--Sobic004G309900 Sobic003G181700 Sobic003G181700 Sobic004G122900--Sobic003G181700 Sobic009G122500 Sobic009G122500 Sobic004G122900--Sobic009G122500 Sobic009G194000 Sobic009G194000 Sobic004G122900--Sobic009G194000 Sobic001G156900 Sobic001G156900 Sobic004G122900--Sobic001G156900 Sobic001G043200 Sobic001G043200 Sobic004G122900--Sobic001G043200 Sobic001G335000 Sobic001G335000 Sobic004G122900--Sobic001G335000 Sobic004G122900--Sobic001G308400 Sobic003G021600 Sobic003G021600 Sobic004G122900--Sobic003G021600 Sobic002G227500 Sobic002G227500 Sobic004G122900--Sobic002G227500 Sobic010G223400 Sobic010G223400 Sobic003G182300--Sobic010G223400 Sobic003G363700 Sobic003G363700 Sobic003G182300--Sobic003G363700 Sobic001G449900 Sobic001G449900 Sobic003G182300--Sobic001G449900 Sobic001G474400 Sobic001G474400 Sobic003G182300--Sobic001G474400 Sobic003G193500 Sobic003G193500 Sobic003G182300--Sobic003G193500 Sobic010G169900 Sobic010G169900 Sobic003G182300--Sobic010G169900 Sobic001G015400 Sobic001G015400 Sobic003G182300--Sobic001G015400 Sobic007G042900 Sobic007G042900 Sobic003G182300--Sobic007G042900 Sobic003G182300--Sobic003G181700
Octagon: transcription factors


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