Gene annotation
Transcriptome id Sobic.006G223500.1
Synonym Sb06g029280, NAP10, ATNAP10
Functional annotation ABC transporter, ATP-binding protein, putative, expressed
UniProt C5YGI3
Pfam PF00005
Panther DB PTHR24220 PTHR24220:SF508
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016887; ATPase activity GO:0005524ATP binding


Orthologs (automatic annotation)
TAIR AT1G63270 : non-intrinsic ABC protein 10
RAP-DB (Rice) LOC_Os04g53550.1 : ABC transporter, ATP-binding protein, putative, expressed
MaizeGDB (Corn) Zm00025a057080
Brachypodium KQJ84756
Barley HORVU2Hr1G106990.3 , HORVU2Hr1G106990.2 , HORVU2Hr1G106990.1
Wheat -
Populus -


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cDNA sequences
Sobic.006G223500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G001900 expressed protein -
2 Sobic.002G371100 40S ribosomal protein S3-1, putative, expressed K02985: RP-S3e, small subunit ribosomal protein S3e
3 Sobic.006G231500 acetyltransferase, GNAT family, putative, expressed K00670: NAA30, N-alpha-acetyltransferase 30
4 Sobic.009G212300 eukaryotic translation initiation factor 3 subunit F, putative, expressed K03249: translation initiation factor 3 subunit F
5 Sobic.010G013900 DAG protein, chloroplast precursor, putative, expressed -
6 Sobic.004G202100 dehydrogenase, putative, expressed K00030: isocitrate dehydrogenase (NAD+)
7 Sobic.001G282500 NADH dehydrogenase 1 alpha subcomplex subunit 12, putative, expressed K11352: NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 12
8 Sobic.003G388700 ribosomal protein L13, putative, expressed K02871: RP-L13, MRPL13, large subunit ribosomal protein L13
9 Sobic.008G051900 expressed protein K02155: ATPeV0C, V-type H+-transporting ATPase 16kDa proteolipid subunit
10 Sobic.002G262200 expressed protein -
11 Sobic.009G240700 -(PubMedID : 26976818)@lactate/malate dehydrogenase, putative, expressed K00026: malate dehydrogenase
12 Sobic.002G260200 - -
13 Sobic.003G308000 expressed protein K15902: PCC1, EKC/KEOPS complex subunit PCC1/LAGE3
14 Sobic.005G191600 OsSigP7 - Putative Type I Signal Peptidase homologue@ employs a putative Ser/Lys catalytic dyad, expressed K09647: mitochondrial inner membrane protease subunit 1
15 Sobic.003G028100 MPPN domain containing protein, expressed K14313: NUP35, nuclear pore complex protein Nup53
16 Sobic.003G351000 60S ribosomal protein L36-2, putative, expressed K02920: RP-L36e, large subunit ribosomal protein L36e
17 Sobic.009G234400 eukaryotic translation initiation factor 3 subunit D, putative, expressed K03251: translation initiation factor 3 subunit D
18 Sobic.002G131600 expressed protein -
19 Sobic.001G112400 cytochrome c oxidase assembly protein COX11, mitochondrial precursor, putative, expressed K02258: COX11, cytochrome c oxidase assembly protein subunit 11
20 Sobic.008G021100 ribosomal protein, putative, expressed K02960: RP-S16e, small subunit ribosomal protein S16e


Gene co-expression network
sample Sobic006G223500 Sobic006G223500 Sobic009G001900 Sobic009G001900 Sobic006G223500--Sobic009G001900 Sobic002G371100 Sobic002G371100 Sobic006G223500--Sobic002G371100 Sobic006G231500 Sobic006G231500 Sobic006G223500--Sobic006G231500 Sobic009G212300 Sobic009G212300 Sobic006G223500--Sobic009G212300 Sobic010G013900 Sobic010G013900 Sobic006G223500--Sobic010G013900 Sobic004G202100 Sobic004G202100 Sobic006G223500--Sobic004G202100 Sobic001G282500 Sobic001G282500 Sobic006G223500--Sobic001G282500 Sobic003G388700 Sobic003G388700 Sobic006G223500--Sobic003G388700 Sobic008G051900 Sobic008G051900 Sobic006G223500--Sobic008G051900 Sobic002G296200 Sobic002G296200 Sobic009G001900--Sobic002G296200 Sobic008G136800 Sobic008G136800 Sobic009G001900--Sobic008G136800 Sobic004G066800 Sobic004G066800 Sobic009G001900--Sobic004G066800 Sobic006G203900 Sobic006G203900 Sobic009G001900--Sobic006G203900 Sobic003G322300 Sobic003G322300 Sobic009G001900--Sobic003G322300 Sobic004G164000 Sobic004G164000 Sobic009G001900--Sobic004G164000 Sobic009G001900--Sobic006G231500 Sobic004G260200 Sobic004G260200 Sobic009G001900--Sobic004G260200 Sobic002G309700 Sobic002G309700 Sobic009G001900--Sobic002G309700 Sobic001G018800 Sobic001G018800 Sobic002G371100--Sobic001G018800 Sobic008G073300 Sobic008G073300 Sobic002G371100--Sobic008G073300 Sobic001G025600 Sobic001G025600 Sobic002G371100--Sobic001G025600 Sobic002G255100 Sobic002G255100 Sobic002G371100--Sobic002G255100 Sobic002G049300 Sobic002G049300 Sobic002G371100--Sobic002G049300 Sobic004G103700 Sobic004G103700 Sobic002G371100--Sobic004G103700 Sobic003G308000 Sobic003G308000 Sobic002G371100--Sobic003G308000 Sobic004G002350 Sobic004G002350 Sobic002G371100--Sobic004G002350 Sobic009G227400 Sobic009G227400 Sobic002G371100--Sobic009G227400 Sobic003G305100 Sobic003G305100 Sobic006G231500--Sobic003G305100 Sobic006G231500--Sobic009G212300 Sobic006G231500--Sobic009G001900 Sobic006G231500--Sobic004G202100 Sobic004G012800 Sobic004G012800 Sobic006G231500--Sobic004G012800 Sobic006G109700 Sobic006G109700 Sobic006G231500--Sobic006G109700 Sobic007G091000 Sobic007G091000 Sobic006G231500--Sobic007G091000 Sobic006G231500--Sobic002G296200 Sobic001G286300 Sobic001G286300 Sobic006G231500--Sobic001G286300 Sobic009G234400 Sobic009G234400 Sobic009G212300--Sobic009G234400 Sobic003G196800 Sobic003G196800 Sobic009G212300--Sobic003G196800 Sobic001G096100 Sobic001G096100 Sobic009G212300--Sobic001G096100 Sobic009G212300--Sobic006G231500 Sobic009G212300--Sobic003G308000 Sobic001G404100 Sobic001G404100 Sobic009G212300--Sobic001G404100 Sobic007G217400 Sobic007G217400 Sobic009G212300--Sobic007G217400 Sobic001G481700 Sobic001G481700 Sobic009G212300--Sobic001G481700 Sobic006G211800 Sobic006G211800 Sobic009G212300--Sobic006G211800 Sobic010G013900--Sobic001G025600 Sobic010G013900--Sobic002G371100 Sobic005G027300 Sobic005G027300 Sobic010G013900--Sobic005G027300 Sobic010G013900--Sobic001G481700 Sobic004G248900 Sobic004G248900 Sobic010G013900--Sobic004G248900 Sobic010G013900--Sobic004G002350 Sobic010G013900--Sobic003G196800 Sobic001G117400 Sobic001G117400 Sobic010G013900--Sobic001G117400 Sobic003G028100 Sobic003G028100 Sobic010G013900--Sobic003G028100 Sobic001G031900 Sobic001G031900 Sobic004G202100--Sobic001G031900 Sobic002G395000 Sobic002G395000 Sobic004G202100--Sobic002G395000 Sobic004G262300 Sobic004G262300 Sobic004G202100--Sobic004G262300 Sobic006G058900 Sobic006G058900 Sobic004G202100--Sobic006G058900 Sobic004G202100--Sobic001G282500 Sobic004G202100--Sobic006G231500 Sobic002G309500 Sobic002G309500 Sobic004G202100--Sobic002G309500 Sobic004G297700 Sobic004G297700 Sobic004G202100--Sobic004G297700 Sobic007G023400 Sobic007G023400 Sobic004G202100--Sobic007G023400 Sobic001G282500--Sobic002G309700 Sobic009G215300 Sobic009G215300 Sobic001G282500--Sobic009G215300 Sobic001G282500--Sobic004G260200 Sobic002G356400 Sobic002G356400 Sobic001G282500--Sobic002G356400 Sobic001G282500--Sobic002G395000 Sobic002G308300 Sobic002G308300 Sobic001G282500--Sobic002G308300 Sobic001G181500 Sobic001G181500 Sobic001G282500--Sobic001G181500 Sobic003G135600 Sobic003G135600 Sobic001G282500--Sobic003G135600 Sobic001G350600 Sobic001G350600 Sobic001G282500--Sobic001G350600 Sobic007G119600 Sobic007G119600 Sobic003G388700--Sobic007G119600 Sobic001G073600 Sobic001G073600 Sobic003G388700--Sobic001G073600 Sobic003G388700--Sobic003G135600 Sobic009G191400 Sobic009G191400 Sobic003G388700--Sobic009G191400 Sobic002G079700 Sobic002G079700 Sobic003G388700--Sobic002G079700 Sobic001G473400 Sobic001G473400 Sobic003G388700--Sobic001G473400 Sobic010G002800 Sobic010G002800 Sobic003G388700--Sobic010G002800 Sobic010G258000 Sobic010G258000 Sobic003G388700--Sobic010G258000 Sobic006G041800 Sobic006G041800 Sobic003G388700--Sobic006G041800 Sobic010G018400 Sobic010G018400 Sobic008G051900--Sobic010G018400 Sobic004G037700 Sobic004G037700 Sobic008G051900--Sobic004G037700 Sobic001G112400 Sobic001G112400 Sobic008G051900--Sobic001G112400 Sobic002G073800 Sobic002G073800 Sobic008G051900--Sobic002G073800 Sobic008G051900--Sobic004G202100 Sobic002G260200 Sobic002G260200 Sobic008G051900--Sobic002G260200 Sobic008G051900--Sobic002G309500 Sobic008G051900--Sobic003G305100 Sobic005G055000 Sobic005G055000 Sobic008G051900--Sobic005G055000
Octagon: transcription factors


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