Gene annotation
Transcriptome id Sobic.006G254200.3,Sobic.006G254200.1
Synonym Sb06g031805
Functional annotation OsDegp11 - Putative Deg protease homologue, expressed
UniProt A0A1Z5RFG1 , A0A1B6PNV6
Pfam PF13365
Panther DB PTHR22939 PTHR22939:SF89
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G27660 : Trypsin family protein with PDZ domain
RAP-DB (Rice) LOC_Os08g04920.3 : OsDegp11 - Putative Deg protease homologue, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G263700 expressed protein -
2 Sobic.004G062600 OsFBX154 - F-box domain containing protein, expressed -
3 Sobic.001G218600 MATH domain containing protein, expressed -
4 Sobic.010G263400 expressed protein -
5 Sobic.001G506400 expressed protein -
6 Sobic.001G034200 60S ribosomal protein L36-2, putative, expressed K02920: RP-L36e, large subunit ribosomal protein L36e
7 Sobic.003G217800 ras-related protein, putative, expressed K07936: GTP-binding nuclear protein Ran
8 Sobic.003G044000 lipase class 3 family protein, putative, expressed -
9 Sobic.003G214850 - -
10 Sobic.005G212100 powdery mildew resistance protein PM3b, putative, expressed -
11 Sobic.007G144100 eukaryotic translation initiation factor 3 subunit C, putative, expressed K03252: translation initiation factor 3 subunit C
12 Sobic.003G396500 ZOS5-12 - C2H2 zinc finger protein, expressed -
13 Sobic.003G258100 dynamin family protein, putative, expressed -
14 Sobic.005G070301 - K03007: RPB10, DNA-directed RNA polymerases I, II, and III subunit RPABC5
15 Sobic.010G232300 ubiquitin family protein, expressed -
16 Sobic.004G168900 elongation factor Tu family protein, putative, expressed K14536: ribosome assembly protein 1
17 Sobic.001G091701 - -
18 Sobic.004G203000 cytochrome P450, putative, expressed K15402: fatty acid omega-hydroxylase
19 Sobic.009G047066 - -
20 Sobic.003G090000 seven in absentia protein family protein, putative, expressed K04506: E3 ubiquitin-protein ligase SIAH1


Gene co-expression network
sample Sobic006G254200 Sobic006G254200 Sobic010G263700 Sobic010G263700 Sobic006G254200--Sobic010G263700 Sobic004G062600 Sobic004G062600 Sobic006G254200--Sobic004G062600 Sobic001G218600 Sobic001G218600 Sobic006G254200--Sobic001G218600 Sobic010G263400 Sobic010G263400 Sobic006G254200--Sobic010G263400 Sobic001G506400 Sobic001G506400 Sobic006G254200--Sobic001G506400 Sobic001G034200 Sobic001G034200 Sobic006G254200--Sobic001G034200 Sobic003G217800 Sobic003G217800 Sobic006G254200--Sobic003G217800 Sobic003G044000 Sobic003G044000 Sobic006G254200--Sobic003G044000 Sobic003G214850 Sobic003G214850 Sobic006G254200--Sobic003G214850 Sobic010G263700--Sobic001G034200 Sobic001G144150 Sobic001G144150 Sobic010G263700--Sobic001G144150 Sobic007G041100 Sobic007G041100 Sobic010G263700--Sobic007G041100 Sobic006G199500 Sobic006G199500 Sobic010G263700--Sobic006G199500 Sobic004G168900 Sobic004G168900 Sobic010G263700--Sobic004G168900 Sobic009G048700 Sobic009G048700 Sobic010G263700--Sobic009G048700 Sobic010G129450 Sobic010G129450 Sobic010G263700--Sobic010G129450 Sobic003G005700 Sobic003G005700 Sobic010G263700--Sobic003G005700 Sobic004G020200 Sobic004G020200 Sobic010G263700--Sobic004G020200 Sobic004G062600--Sobic003G217800 Sobic003G200000 Sobic003G200000 Sobic004G062600--Sobic003G200000 Sobic004G062600--Sobic010G263400 Sobic007G102300 Sobic007G102300 Sobic004G062600--Sobic007G102300 Sobic005G045800 Sobic005G045800 Sobic004G062600--Sobic005G045800 Sobic003G258100 Sobic003G258100 Sobic004G062600--Sobic003G258100 Sobic003G352900 Sobic003G352900 Sobic004G062600--Sobic003G352900 Sobic001G091701 Sobic001G091701 Sobic004G062600--Sobic001G091701 Sobic002G299500 Sobic002G299500 Sobic004G062600--Sobic002G299500 Sobic003G090000 Sobic003G090000 Sobic001G218600--Sobic003G090000 Sobic003G027000 Sobic003G027000 Sobic001G218600--Sobic003G027000 Sobic003G396500 Sobic003G396500 Sobic001G218600--Sobic003G396500 Sobic005G070301 Sobic005G070301 Sobic001G218600--Sobic005G070301 Sobic001G218600--Sobic001G506400 Sobic001G218600--Sobic003G044000 Sobic007G060100 Sobic007G060100 Sobic001G218600--Sobic007G060100 Sobic010G157200 Sobic010G157200 Sobic001G218600--Sobic010G157200 Sobic001G218600--Sobic010G263400 Sobic010G263400--Sobic007G060100 Sobic010G263400--Sobic003G258100 Sobic003G072700 Sobic003G072700 Sobic010G263400--Sobic003G072700 Sobic007G144100 Sobic007G144100 Sobic010G263400--Sobic007G144100 Sobic010G263400--Sobic004G168900 Sobic010G263400--Sobic002G299500 Sobic010G263400--Sobic003G217800 Sobic004G038400 Sobic004G038400 Sobic010G263400--Sobic004G038400 Sobic004G250800 Sobic004G250800 Sobic010G263400--Sobic004G250800 Sobic001G506400--Sobic007G144100 Sobic001G506400--Sobic003G258100 Sobic001G506400--Sobic001G034200 Sobic001G506400--Sobic004G038400 Sobic001G076600 Sobic001G076600 Sobic001G506400--Sobic001G076600 Sobic007G048900 Sobic007G048900 Sobic001G506400--Sobic007G048900 Sobic001G506400--Sobic003G352900 Sobic001G506400--Sobic004G168900 Sobic010G038300 Sobic010G038300 Sobic001G506400--Sobic010G038300 Sobic002G080450 Sobic002G080450 Sobic001G034200--Sobic002G080450 Sobic010G266600 Sobic010G266600 Sobic001G034200--Sobic010G266600 Sobic001G034200--Sobic010G038300 Sobic001G034200--Sobic004G168900 Sobic002G123300 Sobic002G123300 Sobic001G034200--Sobic002G123300 Sobic001G034200--Sobic010G129450 Sobic007G063800 Sobic007G063800 Sobic001G034200--Sobic007G063800 Sobic005G202901 Sobic005G202901 Sobic001G034200--Sobic005G202901 Sobic001G136000 Sobic001G136000 Sobic001G034200--Sobic001G136000 Sobic003G217800--Sobic007G144100 Sobic003G217800--Sobic003G258100 Sobic003G217800--Sobic003G352900 Sobic003G217800--Sobic002G299500 Sobic003G018000 Sobic003G018000 Sobic003G217800--Sobic003G018000 Sobic001G485700 Sobic001G485700 Sobic003G217800--Sobic001G485700 Sobic009G220700 Sobic009G220700 Sobic003G217800--Sobic009G220700 Sobic003G217800--Sobic004G062600 Sobic003G217800--Sobic010G263400 Sobic003G044000--Sobic001G218600 Sobic003G044000--Sobic003G090000 Sobic003G044000--Sobic003G027000 Sobic003G044000--Sobic001G506400 Sobic001G131900 Sobic001G131900 Sobic003G044000--Sobic001G131900 Sobic003G044000--Sobic003G396500 Sobic009G066600 Sobic009G066600 Sobic003G044000--Sobic009G066600 Sobic004G313400 Sobic004G313400 Sobic003G044000--Sobic004G313400 Sobic003G293400 Sobic003G293400 Sobic003G044000--Sobic003G293400 Sobic008G007800 Sobic008G007800 Sobic003G214850--Sobic008G007800 Sobic003G214850--Sobic003G005700 Sobic003G214850--Sobic001G034200 Sobic008G007700 Sobic008G007700 Sobic003G214850--Sobic008G007700 Sobic003G214850--Sobic007G041100 Sobic003G214850--Sobic004G168900 Sobic003G214850--Sobic010G038300 Sobic009G229400 Sobic009G229400 Sobic003G214850--Sobic009G229400 Sobic009G005200 Sobic009G005200 Sobic003G214850--Sobic009G005200
Octagon: transcription factors


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