Gene annotation
Transcriptome id Sobic.006G259800.1
Synonym SCRM, ATICE1, Sb06g032280, ICE1
Functional annotation inducer of CBF expression 2, putative, expressed
UniProt A0A1B6PNZ2
Pfam -
Panther DB PTHR31945:SF2 PTHR31945
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G26744 : basic helix-loop-helix (bHLH) DNA-binding superfamily protein
RAP-DB (Rice) LOC_Os01g70310.1 : inducer of CBF expression 2, putative, expressed
MaizeGDB (Corn) Zm00025a026188
Brachypodium KQK11326
Barley HORVU3Hr1G096460.8 , HORVU3Hr1G096460.9 , HORVU3Hr1G096460.2 , HORVU3Hr1G096460.3 , HORVU3Hr1G096460.4 , HORVU3Hr1G096460.5 , HORVU3Hr1G096460.6 , HORVU3Hr1G096460.7
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G374100 jmjC domain containing protein, expressed K15601: [histone H3]-dimethyl-L-lysine9 demethylase
2 Sobic.009G038900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@highly upregulated during chilling in a chilling tolerant sorghum NSG(PubMedID : 29293808)@CGMC_MAPKCGMC_2.1 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed K04371: ERK, mitogen-activated protein kinase 1/3
3 Sobic.001G244700 RIO1 family protein, expressed K08851: TP53RK, PRPK, TP53 regulating kinase and related kinases
4 Sobic.001G530900 expressed protein -
5 Sobic.004G244900 expressed protein -
6 Sobic.004G042200 OsFBO8 - F-box and other domain containing protein, expressed K12115: clock-associated PAS protein ZTL
7 Sobic.008G044100 expressed protein -
8 Sobic.001G519900 ribonuclease protein, putative, expressed K12585: DIS3, exosome complex exonuclease DIS3/RRP44
9 Sobic.003G155100 suppressor of Mek, putative, expressed K17491: SMEK, protein phosphatase 4 regulatory subunit 3
10 Sobic.006G219600 SIT4 phosphatase-associated protein domain containing protein, expressed K15501: PPP6R3, serine/threonine-protein phosphatase 6 regulatory subunit 3
11 Sobic.010G125500 zinc finger, C3HC4 type domain containing protein, expressed K10601: SYVN1, E3 ubiquitin-protein ligase synoviolin
12 Sobic.004G356700 oligopeptidase, putative, expressed K01414: oligopeptidase A
13 Sobic.003G011300 expressed protein K12617: PATL1, DNA topoisomerase 2-associated protein PAT1
14 Sobic.007G198300 endonuclease/exonuclease/phosphatase family domain containing protein, expressed -
15 Sobic.004G134200 GTP binding protein, putative, expressed -
16 Sobic.005G106600 CGMC_MAPKCGMC_2.1 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed K04371: ERK, mitogen-activated protein kinase 1/3
17 Sobic.001G375100 AAA-type ATPase family protein, putative, expressed -
18 Sobic.009G215500 transcription initiation factor IIB, putative, expressed K15196: BRF1, transcription factor IIIB 90 kDa subunit
19 Sobic.010G205100 Sucrose phosphate synthase genes(PubMedID : 24456189)@sucrose phosphate synthase(PubMedID : 26616172)@Sugar synthesis(PubMedID : 27330561)@sucrose-phosphate synthase, putative, expressed K00696: sucrose-phosphate synthase
20 Sobic.007G090403 - -


Gene co-expression network
sample Sobic006G259800 Sobic006G259800 Sobic001G374100 Sobic001G374100 Sobic006G259800--Sobic001G374100 Sobic009G038900 Sobic009G038900 Sobic006G259800--Sobic009G038900 Sobic001G244700 Sobic001G244700 Sobic006G259800--Sobic001G244700 Sobic001G530900 Sobic001G530900 Sobic006G259800--Sobic001G530900 Sobic004G244900 Sobic004G244900 Sobic006G259800--Sobic004G244900 Sobic004G042200 Sobic004G042200 Sobic006G259800--Sobic004G042200 Sobic008G044100 Sobic008G044100 Sobic006G259800--Sobic008G044100 Sobic001G519900 Sobic001G519900 Sobic006G259800--Sobic001G519900 Sobic003G155100 Sobic003G155100 Sobic006G259800--Sobic003G155100 Sobic001G374100--Sobic008G044100 Sobic004G134200 Sobic004G134200 Sobic001G374100--Sobic004G134200 Sobic010G010700 Sobic010G010700 Sobic001G374100--Sobic010G010700 Sobic001G374100--Sobic003G155100 Sobic006G252900 Sobic006G252900 Sobic001G374100--Sobic006G252900 Sobic003G011300 Sobic003G011300 Sobic001G374100--Sobic003G011300 Sobic008G001200 Sobic008G001200 Sobic001G374100--Sobic008G001200 Sobic001G374100--Sobic006G259800 Sobic001G456900 Sobic001G456900 Sobic001G374100--Sobic001G456900 Sobic004G281800 Sobic004G281800 Sobic009G038900--Sobic004G281800 Sobic005G101200 Sobic005G101200 Sobic009G038900--Sobic005G101200 Sobic005G106600 Sobic005G106600 Sobic009G038900--Sobic005G106600 Sobic005G068700 Sobic005G068700 Sobic009G038900--Sobic005G068700 Sobic009G038900--Sobic004G042200 Sobic003G220100 Sobic003G220100 Sobic009G038900--Sobic003G220100 Sobic001G333800 Sobic001G333800 Sobic009G038900--Sobic001G333800 Sobic001G359300 Sobic001G359300 Sobic009G038900--Sobic001G359300 Sobic010G085100 Sobic010G085100 Sobic009G038900--Sobic010G085100 Sobic002G404800 Sobic002G404800 Sobic001G244700--Sobic002G404800 Sobic002G196600 Sobic002G196600 Sobic001G244700--Sobic002G196600 Sobic001G244700--Sobic009G038900 Sobic001G244600 Sobic001G244600 Sobic001G244700--Sobic001G244600 Sobic001G217900 Sobic001G217900 Sobic001G244700--Sobic001G217900 Sobic001G244700--Sobic010G085100 Sobic001G244700--Sobic006G259800 Sobic003G260100 Sobic003G260100 Sobic001G244700--Sobic003G260100 Sobic008G033000 Sobic008G033000 Sobic001G244700--Sobic008G033000 Sobic010G002700 Sobic010G002700 Sobic001G530900--Sobic010G002700 Sobic009G215500 Sobic009G215500 Sobic001G530900--Sobic009G215500 Sobic001G378100 Sobic001G378100 Sobic001G530900--Sobic001G378100 Sobic007G185700 Sobic007G185700 Sobic001G530900--Sobic007G185700 Sobic005G118400 Sobic005G118400 Sobic001G530900--Sobic005G118400 Sobic005G084500 Sobic005G084500 Sobic001G530900--Sobic005G084500 Sobic003G332700 Sobic003G332700 Sobic001G530900--Sobic003G332700 Sobic001G465700 Sobic001G465700 Sobic001G530900--Sobic001G465700 Sobic003G217700 Sobic003G217700 Sobic001G530900--Sobic003G217700 Sobic001G457800 Sobic001G457800 Sobic004G244900--Sobic001G457800 Sobic004G334300 Sobic004G334300 Sobic004G244900--Sobic004G334300 Sobic003G119600 Sobic003G119600 Sobic004G244900--Sobic003G119600 Sobic004G244900--Sobic003G155100 Sobic004G244900--Sobic008G001200 Sobic004G356700 Sobic004G356700 Sobic004G244900--Sobic004G356700 Sobic009G201300 Sobic009G201300 Sobic004G244900--Sobic009G201300 Sobic002G275700 Sobic002G275700 Sobic004G244900--Sobic002G275700 Sobic003G168100 Sobic003G168100 Sobic004G244900--Sobic003G168100 Sobic004G042200--Sobic009G038900 Sobic004G042200--Sobic010G002700 Sobic003G191700 Sobic003G191700 Sobic004G042200--Sobic003G191700 Sobic006G050700 Sobic006G050700 Sobic004G042200--Sobic006G050700 Sobic004G042200--Sobic003G220100 Sobic004G042200--Sobic003G155100 Sobic010G243900 Sobic010G243900 Sobic004G042200--Sobic010G243900 Sobic004G042200--Sobic005G106600 Sobic006G133900 Sobic006G133900 Sobic004G042200--Sobic006G133900 Sobic008G044100--Sobic010G010700 Sobic008G044100--Sobic004G134200 Sobic008G044100--Sobic001G374100 Sobic008G044100--Sobic003G155100 Sobic010G206900 Sobic010G206900 Sobic008G044100--Sobic010G206900 Sobic001G230000 Sobic001G230000 Sobic008G044100--Sobic001G230000 Sobic008G044100--Sobic008G001200 Sobic003G389200 Sobic003G389200 Sobic008G044100--Sobic003G389200 Sobic002G316600 Sobic002G316600 Sobic008G044100--Sobic002G316600 Sobic001G373900 Sobic001G373900 Sobic001G519900--Sobic001G373900 Sobic001G519900--Sobic004G334300 Sobic002G308700 Sobic002G308700 Sobic001G519900--Sobic002G308700 Sobic003G186000 Sobic003G186000 Sobic001G519900--Sobic003G186000 Sobic005G162500 Sobic005G162500 Sobic001G519900--Sobic005G162500 Sobic001G519900--Sobic004G356700 Sobic001G375100 Sobic001G375100 Sobic001G519900--Sobic001G375100 Sobic001G192000 Sobic001G192000 Sobic001G519900--Sobic001G192000 Sobic001G519900--Sobic006G259800 Sobic003G155100--Sobic008G001200 Sobic006G219600 Sobic006G219600 Sobic003G155100--Sobic006G219600 Sobic003G155100--Sobic010G206900 Sobic003G155100--Sobic001G230000 Sobic003G155100--Sobic001G375100 Sobic001G194200 Sobic001G194200 Sobic003G155100--Sobic001G194200 Sobic003G155100--Sobic010G010700 Sobic009G256400 Sobic009G256400 Sobic003G155100--Sobic009G256400 Sobic004G291900 Sobic004G291900 Sobic003G155100--Sobic004G291900
Octagon: transcription factors


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