Gene annotation
Transcriptome id Sobic.006G261600.1
Synonym ATPAO4, Sb06g032460, PAO4
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
amine oxidase, flavin-containing, domain containing protein, expressed
UniProt C5YA49
Pfam PF13450
Panther DB PTHR10742 PTHR10742:SF228
NCBI CDD KOG0029; Amine oxidase
KEGG Orthology K17839; PAO4, PAO3, polyamine oxidase
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G65840 : polyamine oxidase 4
RAP-DB (Rice) LOC_Os04g57560.1 : amine oxidase, flavin-containing, domain containing protein, expressed
MaizeGDB (Corn) Zm00025a057351
Brachypodium KQJ85223 , KQJ85222
Barley HORVU2Hr1G121060.1 , HORVU2Hr1G121060.4 , HORVU2Hr1G121060.5 , HORVU2Hr1G121060.6 , HORVU2Hr1G121060.3
Wheat TraesCS2A02G548200 , TraesCS2B02G579000
Populus -


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cDNA sequences
Sobic.006G261600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G079900 COP9 signalosome complex subunit 8, putative, expressed K12181: COPS8, COP9 signalosome complex subunit 8
2 Sobic.002G199400 growth regulator related protein, putative, expressed -
3 Sobic.007G022700 proteasome subunit, putative, expressed K12177: COPS3, COP9 signalosome complex subunit 3
4 Sobic.007G031100 RNA polymerase II complex component SRB7, putative, expressed K15152: MED21, mediator of RNA polymerase II transcription subunit 21
5 Sobic.004G107000 DNA repair protein Rad51, putative, expressed K10872: meiotic recombination protein DMC1
6 Sobic.001G469200 proteasome subunit, putative, expressed K12178: COPS4, COP9 signalosome complex subunit 4
7 Sobic.007G200900 pyridoxamine 5\'-phosphate oxidase family protein, putative, expressed -
8 Sobic.005G110526 - -
9 Sobic.004G356300 expressed protein -
10 Sobic.001G464400 expressed protein -
11 Sobic.002G428800 ubiquitin-activating enzyme, putative, expressed K03178: UBE1, ubiquitin-activating enzyme E1
12 Sobic.007G217400 COP9 signalosome complex subunit 6a, putative, expressed K12179: COPS6, COP9 signalosome complex subunit 6
13 Sobic.004G244000 dehydrogenase E1 component domain containing protein, expressed K00161: PDHA, pyruvate dehydrogenase E1 component alpha subunit
14 Sobic.006G259900 reticulon domain containing protein, putative, expressed -
15 Sobic.006G282200 dolichyl-diphosphooligosaccharide--protein glycosyltransferase 67 kDasubunit precursor, putative, expressed K12666: OST1, oligosaccharyltransferase complex subunit alpha (ribophorin I)
16 Sobic.006G041800 mitochondrial import inner membrane translocase subunit Tim17, putative, expressed -
17 Sobic.001G151600 OsRhmbd9 - Putative Rhomboid homologue, expressed -
18 Sobic.003G085500 signal peptidase complex subunit 3, putative, expressed K12948: SPCS3, signal peptidase complex subunit 3
19 Sobic.003G190800 GA18326-PA, putative, expressed -
20 Sobic.004G007700 pentatricopeptide, putative, expressed -


Gene co-expression network
sample Sobic006G261600 Sobic006G261600 Sobic006G079900 Sobic006G079900 Sobic006G261600--Sobic006G079900 Sobic002G199400 Sobic002G199400 Sobic006G261600--Sobic002G199400 Sobic007G022700 Sobic007G022700 Sobic006G261600--Sobic007G022700 Sobic007G031100 Sobic007G031100 Sobic006G261600--Sobic007G031100 Sobic004G107000 Sobic004G107000 Sobic006G261600--Sobic004G107000 Sobic001G469200 Sobic001G469200 Sobic006G261600--Sobic001G469200 Sobic007G200900 Sobic007G200900 Sobic006G261600--Sobic007G200900 Sobic005G110526 Sobic005G110526 Sobic006G261600--Sobic005G110526 Sobic004G356300 Sobic004G356300 Sobic006G261600--Sobic004G356300 Sobic007G217400 Sobic007G217400 Sobic006G079900--Sobic007G217400 Sobic009G124400 Sobic009G124400 Sobic006G079900--Sobic009G124400 Sobic003G190800 Sobic003G190800 Sobic006G079900--Sobic003G190800 Sobic002G331300 Sobic002G331300 Sobic006G079900--Sobic002G331300 Sobic003G028100 Sobic003G028100 Sobic006G079900--Sobic003G028100 Sobic001G542900 Sobic001G542900 Sobic006G079900--Sobic001G542900 Sobic001G431700 Sobic001G431700 Sobic006G079900--Sobic001G431700 Sobic003G367900 Sobic003G367900 Sobic006G079900--Sobic003G367900 Sobic001G404100 Sobic001G404100 Sobic006G079900--Sobic001G404100 Sobic002G160700 Sobic002G160700 Sobic002G199400--Sobic002G160700 Sobic001G151600 Sobic001G151600 Sobic002G199400--Sobic001G151600 Sobic002G199400--Sobic001G469200 Sobic001G358500 Sobic001G358500 Sobic002G199400--Sobic001G358500 Sobic006G259900 Sobic006G259900 Sobic002G199400--Sobic006G259900 Sobic006G282200 Sobic006G282200 Sobic002G199400--Sobic006G282200 Sobic005G175000 Sobic005G175000 Sobic002G199400--Sobic005G175000 Sobic004G030400 Sobic004G030400 Sobic002G199400--Sobic004G030400 Sobic005G144201 Sobic005G144201 Sobic002G199400--Sobic005G144201 Sobic004G256300 Sobic004G256300 Sobic007G022700--Sobic004G256300 Sobic003G222700 Sobic003G222700 Sobic007G022700--Sobic003G222700 Sobic003G085500 Sobic003G085500 Sobic007G022700--Sobic003G085500 Sobic002G232400 Sobic002G232400 Sobic007G022700--Sobic002G232400 Sobic009G207200 Sobic009G207200 Sobic007G022700--Sobic009G207200 Sobic004G186100 Sobic004G186100 Sobic007G022700--Sobic004G186100 Sobic001G191900 Sobic001G191900 Sobic007G022700--Sobic001G191900 Sobic007G022700--Sobic006G259900 Sobic003G005900 Sobic003G005900 Sobic007G022700--Sobic003G005900 Sobic007G010200 Sobic007G010200 Sobic007G031100--Sobic007G010200 Sobic001G432100 Sobic001G432100 Sobic007G031100--Sobic001G432100 Sobic002G280900 Sobic002G280900 Sobic007G031100--Sobic002G280900 Sobic003G410200 Sobic003G410200 Sobic007G031100--Sobic003G410200 Sobic007G031100--Sobic003G085500 Sobic001G188700 Sobic001G188700 Sobic007G031100--Sobic001G188700 Sobic002G422400 Sobic002G422400 Sobic007G031100--Sobic002G422400 Sobic006G245700 Sobic006G245700 Sobic007G031100--Sobic006G245700 Sobic009G232500 Sobic009G232500 Sobic007G031100--Sobic009G232500 Sobic002G283100 Sobic002G283100 Sobic004G107000--Sobic002G283100 Sobic004G107000--Sobic004G186100 Sobic010G013400 Sobic010G013400 Sobic004G107000--Sobic010G013400 Sobic004G226500 Sobic004G226500 Sobic004G107000--Sobic004G226500 Sobic010G040900 Sobic010G040900 Sobic004G107000--Sobic010G040900 Sobic002G222200 Sobic002G222200 Sobic004G107000--Sobic002G222200 Sobic001G347700 Sobic001G347700 Sobic004G107000--Sobic001G347700 Sobic006G271000 Sobic006G271000 Sobic004G107000--Sobic006G271000 Sobic001G073600 Sobic001G073600 Sobic004G107000--Sobic001G073600 Sobic001G469200--Sobic002G199400 Sobic001G115500 Sobic001G115500 Sobic001G469200--Sobic001G115500 Sobic001G085800 Sobic001G085800 Sobic001G469200--Sobic001G085800 Sobic005G115500 Sobic005G115500 Sobic001G469200--Sobic005G115500 Sobic003G132000 Sobic003G132000 Sobic001G469200--Sobic003G132000 Sobic004G075200 Sobic004G075200 Sobic001G469200--Sobic004G075200 Sobic010G108900 Sobic010G108900 Sobic001G469200--Sobic010G108900 Sobic001G469200--Sobic006G245700 Sobic001G487100 Sobic001G487100 Sobic001G469200--Sobic001G487100 Sobic006G196300 Sobic006G196300 Sobic007G200900--Sobic006G196300 Sobic002G428800 Sobic002G428800 Sobic007G200900--Sobic002G428800 Sobic009G149500 Sobic009G149500 Sobic007G200900--Sobic009G149500 Sobic001G473800 Sobic001G473800 Sobic007G200900--Sobic001G473800 Sobic010G223300 Sobic010G223300 Sobic007G200900--Sobic010G223300 Sobic001G434200 Sobic001G434200 Sobic007G200900--Sobic001G434200 Sobic003G444600 Sobic003G444600 Sobic007G200900--Sobic003G444600 Sobic007G112600 Sobic007G112600 Sobic007G200900--Sobic007G112600 Sobic001G449900 Sobic001G449900 Sobic007G200900--Sobic001G449900 Sobic005G110526--Sobic001G188700 Sobic001G110300 Sobic001G110300 Sobic005G110526--Sobic001G110300 Sobic001G434400 Sobic001G434400 Sobic005G110526--Sobic001G434400 Sobic008G107900 Sobic008G107900 Sobic005G110526--Sobic008G107900 Sobic001G129400 Sobic001G129400 Sobic005G110526--Sobic001G129400 Sobic010G194200 Sobic010G194200 Sobic005G110526--Sobic010G194200 Sobic003G248300 Sobic003G248300 Sobic005G110526--Sobic003G248300 Sobic005G110526--Sobic004G356300 Sobic004G184000 Sobic004G184000 Sobic005G110526--Sobic004G184000 Sobic004G007700 Sobic004G007700 Sobic004G356300--Sobic004G007700 Sobic001G011000 Sobic001G011000 Sobic004G356300--Sobic001G011000 Sobic003G075200 Sobic003G075200 Sobic004G356300--Sobic003G075200 Sobic002G367800 Sobic002G367800 Sobic004G356300--Sobic002G367800 Sobic002G090500 Sobic002G090500 Sobic004G356300--Sobic002G090500 Sobic008G057900 Sobic008G057900 Sobic004G356300--Sobic008G057900 Sobic001G176900 Sobic001G176900 Sobic004G356300--Sobic001G176900 Sobic010G134100 Sobic010G134100 Sobic004G356300--Sobic010G134100 Sobic002G071100 Sobic002G071100 Sobic004G356300--Sobic002G071100
Octagon: transcription factors


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