Gene annotation
Transcriptome id Sobic.007G034100.1
Synonym Sb07g002940, CRLK1
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
tyrosine protein kinase domain containing protein, putative, expressed
UniProt A0A1B6PFD0
Pfam PF07714
Panther DB PTHR27003 PTHR27003:SF26
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT5G54590 : Protein kinase superfamily protein
RAP-DB (Rice) LOC_Os08g04420.2 : tyrosine protein kinase domain containing protein, putative, expressed
MaizeGDB (Corn) -
Brachypodium PNT66603 , PNT66604 , KQJ95004 , KQJ95005 , KQJ95001 , KQJ95002 , KQJ95003 , KQJ95006 , KQJ95007
Barley HORVU1Hr1G010520.1 , HORVU1Hr1G010520.3 , HORVU1Hr1G010520.2 , HORVU1Hr1G010520.5 , HORVU1Hr1G010520.4 , HORVU1Hr1G010520.7 , HORVU1Hr1G010520.8 , HORVU7Hr1G073300.23 , HORVU7Hr1G073300.21 , HORVU7Hr1G073300.20 , HORVU7Hr1G073300.27 , HORVU7Hr1G073300.26 , HORVU7Hr1G073300.25 , HORVU7Hr1G073300.24 , HORVU7Hr1G073300.41 , HORVU7Hr1G073300.40 , HORVU7Hr1G073300.42 , HORVU7Hr1G073300.22 , HORVU7Hr1G073300.29 , HORVU7Hr1G073300.28 , HORVU7Hr1G073300.31 , HORVU7Hr1G073300.2 , HORVU7Hr1G073300.3 , HORVU7Hr1G073300.4 , HORVU7Hr1G073300.5 , HORVU7Hr1G073300.6 , HORVU7Hr1G073300.7 , HORVU7Hr1G073300.8 , HORVU7Hr1G073300.9 , HORVU7Hr1G073300.32 , HORVU7Hr1G073300.33 , HORVU7Hr1G073300.34 , HORVU7Hr1G073300.35 , HORVU7Hr1G073300.36 , HORVU7Hr1G073300.37 , HORVU7Hr1G073300.38 , HORVU7Hr1G073300.39 , HORVU7Hr1G073300.18 , HORVU7Hr1G073300.19 , HORVU7Hr1G073300.12 , HORVU7Hr1G073300.13 , HORVU7Hr1G073300.10 , HORVU7Hr1G073300.11 , HORVU7Hr1G073300.16 , HORVU7Hr1G073300.17 , HORVU7Hr1G073300.14
Wheat TraesCS7A02G307400 , TraesCS7B02G207700 , TraesCS7D02G304200
Populus PNT19112 , PNT19111


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G045600 aminotransferase, classes I and II, domain containing protein, expressed -
2 Sobic.001G346500 Ca exchanger(PubMedID : 22196357)@sodium/calcium exchanger protein, putative, expressed K07300: chaA, Ca2+:H+ antiporter
3 Sobic.001G460400 expressed protein -
4 Sobic.010G218300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DNA binding protein, putative, expressed -
5 Sobic.002G274600 glycosyl transferase family 8 protein, expressed -
6 Sobic.001G227850 - -
7 Sobic.003G326800 glycerol-3-phosphate dehydrogenase, putative, expressed K00006: glycerol-3-phosphate dehydrogenase (NAD+)
8 Sobic.006G259401 - K06130: lysophospholipase II
9 Sobic.003G364900 hemerythrin family protein, expressed -
10 Sobic.001G000400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@pleiotropic drug resistance protein, putative, expressed -
11 Sobic.004G257000 transmembrane 9 superfamily member, putative, expressed -
12 Sobic.001G102100 DUF617 domain containing protein, expressed -
13 Sobic.002G101300 erythronate-4-phosphate dehydrogenase domain containing protein, expressed -
14 Sobic.004G079900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@copper-transporting ATPase, putative, expressed K17686: copA, ctpA, P-type Cu+ transporter
15 Sobic.003G152000 peroxidase precursor, putative, expressed K00430: peroxidase
16 Sobic.001G144200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DUF581 domain containing protein, expressed -
17 Sobic.002G381400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@uncharacterized glycosyl hydrolase Rv2006/MT2062, putative, expressed K01087: trehalose 6-phosphate phosphatase
18 Sobic.009G059500 solute carrier family 35 member E3, putative, expressed K15285: solute carrier family 35, member E3
19 Sobic.004G013000 canopy homolog 2 precursor, putative, expressed -
20 Sobic.007G119800 ABC transporter, ATP-binding protein, putative, expressed -


Gene co-expression network
sample Sobic007G034100 Sobic007G034100 Sobic003G045600 Sobic003G045600 Sobic007G034100--Sobic003G045600 Sobic001G346500 Sobic001G346500 Sobic007G034100--Sobic001G346500 Sobic001G460400 Sobic001G460400 Sobic007G034100--Sobic001G460400 Sobic010G218300 Sobic010G218300 Sobic007G034100--Sobic010G218300 Sobic002G274600 Sobic002G274600 Sobic007G034100--Sobic002G274600 Sobic001G227850 Sobic001G227850 Sobic007G034100--Sobic001G227850 Sobic003G326800 Sobic003G326800 Sobic007G034100--Sobic003G326800 Sobic006G259401 Sobic006G259401 Sobic007G034100--Sobic006G259401 Sobic003G364900 Sobic003G364900 Sobic007G034100--Sobic003G364900 Sobic003G045600--Sobic006G259401 Sobic003G236800 Sobic003G236800 Sobic003G045600--Sobic003G236800 Sobic002G101300 Sobic002G101300 Sobic003G045600--Sobic002G101300 Sobic004G079700 Sobic004G079700 Sobic003G045600--Sobic004G079700 Sobic002G153100 Sobic002G153100 Sobic003G045600--Sobic002G153100 Sobic001G140000 Sobic001G140000 Sobic003G045600--Sobic001G140000 Sobic007G119800 Sobic007G119800 Sobic003G045600--Sobic007G119800 Sobic003G045600--Sobic002G274600 Sobic008G151500 Sobic008G151500 Sobic003G045600--Sobic008G151500 Sobic010G216700 Sobic010G216700 Sobic001G346500--Sobic010G216700 Sobic008G023300 Sobic008G023300 Sobic001G346500--Sobic008G023300 Sobic002G197000 Sobic002G197000 Sobic001G346500--Sobic002G197000 Sobic001G346500--Sobic002G274600 Sobic002G381400 Sobic002G381400 Sobic001G346500--Sobic002G381400 Sobic008G071050 Sobic008G071050 Sobic001G346500--Sobic008G071050 Sobic002G310300 Sobic002G310300 Sobic001G346500--Sobic002G310300 Sobic002G271300 Sobic002G271300 Sobic001G346500--Sobic002G271300 Sobic001G346500--Sobic002G101300 Sobic001G360700 Sobic001G360700 Sobic001G460400--Sobic001G360700 Sobic001G067800 Sobic001G067800 Sobic001G460400--Sobic001G067800 Sobic004G161900 Sobic004G161900 Sobic001G460400--Sobic004G161900 Sobic003G017601 Sobic003G017601 Sobic001G460400--Sobic003G017601 Sobic002G207200 Sobic002G207200 Sobic001G460400--Sobic002G207200 Sobic001G460400--Sobic001G227850 Sobic009G246700 Sobic009G246700 Sobic001G460400--Sobic009G246700 Sobic008G037900 Sobic008G037900 Sobic001G460400--Sobic008G037900 Sobic001G460400--Sobic010G218300 Sobic010G218300--Sobic001G460400 Sobic002G283900 Sobic002G283900 Sobic010G218300--Sobic002G283900 Sobic010G218300--Sobic004G161900 Sobic010G045400 Sobic010G045400 Sobic010G218300--Sobic010G045400 Sobic006G160900 Sobic006G160900 Sobic010G218300--Sobic006G160900 Sobic009G238900 Sobic009G238900 Sobic010G218300--Sobic009G238900 Sobic008G191400 Sobic008G191400 Sobic010G218300--Sobic008G191400 Sobic009G221500 Sobic009G221500 Sobic010G218300--Sobic009G221500 Sobic001G245800 Sobic001G245800 Sobic010G218300--Sobic001G245800 Sobic009G084400 Sobic009G084400 Sobic002G274600--Sobic009G084400 Sobic002G274600--Sobic002G197000 Sobic004G079900 Sobic004G079900 Sobic002G274600--Sobic004G079900 Sobic010G010000 Sobic010G010000 Sobic002G274600--Sobic010G010000 Sobic004G014600 Sobic004G014600 Sobic002G274600--Sobic004G014600 Sobic001G218400 Sobic001G218400 Sobic002G274600--Sobic001G218400 Sobic002G029600 Sobic002G029600 Sobic002G274600--Sobic002G029600 Sobic006G171100 Sobic006G171100 Sobic002G274600--Sobic006G171100 Sobic005G106300 Sobic005G106300 Sobic002G274600--Sobic005G106300 Sobic001G227850--Sobic008G191400 Sobic003G319400 Sobic003G319400 Sobic001G227850--Sobic003G319400 Sobic001G299100 Sobic001G299100 Sobic001G227850--Sobic001G299100 Sobic010G031700 Sobic010G031700 Sobic001G227850--Sobic010G031700 Sobic005G202300 Sobic005G202300 Sobic001G227850--Sobic005G202300 Sobic006G003100 Sobic006G003100 Sobic001G227850--Sobic006G003100 Sobic006G135300 Sobic006G135300 Sobic001G227850--Sobic006G135300 Sobic010G152400 Sobic010G152400 Sobic001G227850--Sobic010G152400 Sobic010G097200 Sobic010G097200 Sobic001G227850--Sobic010G097200 Sobic003G096000 Sobic003G096000 Sobic003G326800--Sobic003G096000 Sobic004G226500 Sobic004G226500 Sobic003G326800--Sobic004G226500 Sobic004G056400 Sobic004G056400 Sobic003G326800--Sobic004G056400 Sobic002G186900 Sobic002G186900 Sobic003G326800--Sobic002G186900 Sobic003G340700 Sobic003G340700 Sobic003G326800--Sobic003G340700 Sobic006G126000 Sobic006G126000 Sobic003G326800--Sobic006G126000 Sobic007G150000 Sobic007G150000 Sobic003G326800--Sobic007G150000 Sobic010G101600 Sobic010G101600 Sobic003G326800--Sobic010G101600 Sobic009G164700 Sobic009G164700 Sobic003G326800--Sobic009G164700 Sobic006G259401--Sobic003G045600 Sobic006G259401--Sobic008G151500 Sobic006G259401--Sobic003G236800 Sobic006G259401--Sobic002G101300 Sobic007G120800 Sobic007G120800 Sobic006G259401--Sobic007G120800 Sobic006G259401--Sobic001G140000 Sobic002G283100 Sobic002G283100 Sobic006G259401--Sobic002G283100 Sobic001G392200 Sobic001G392200 Sobic006G259401--Sobic001G392200 Sobic007G179900 Sobic007G179900 Sobic006G259401--Sobic007G179900 Sobic003G266400 Sobic003G266400 Sobic003G364900--Sobic003G266400 Sobic006G236800 Sobic006G236800 Sobic003G364900--Sobic006G236800 Sobic003G105500 Sobic003G105500 Sobic003G364900--Sobic003G105500 Sobic010G018500 Sobic010G018500 Sobic003G364900--Sobic010G018500 Sobic010G051100 Sobic010G051100 Sobic003G364900--Sobic010G051100 Sobic002G232400 Sobic002G232400 Sobic003G364900--Sobic002G232400 Sobic002G090500 Sobic002G090500 Sobic003G364900--Sobic002G090500 Sobic010G042600 Sobic010G042600 Sobic003G364900--Sobic010G042600 Sobic001G131600 Sobic001G131600 Sobic003G364900--Sobic001G131600
Octagon: transcription factors


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