Gene annotation
Transcriptome id Sobic.007G101500.3,Sobic.007G101500.1,Sobic.007G101500.2
Synonym Sb07g012320, APS1, ADG1
Functional annotation "Bt2(Ortholog in maize:Jiang et al., 2013a)" (PubMedID : 31659904)
glucose-1-phosphate adenylyltransferase large subunit, chloroplast precursor, putative, expressed
UniProt B3TW79 , B3TW78 , B3TW97 , B3TW38 , A5Y430 , B3TW49 , B3TW62 , B3TW63 , A5Y419 , B3TWB9 , B3TW55 , A5Y422 , A5Y423 , B3TW32 , B3TWR7 , B3TWB7 , B3TW36 , A5Y416 , B3TW90 , B3TW61 , B3TW41 , B3TW50 , B3TWR8 , B3TW44 , A5Y429 , B3TW73 , B3TW69 , B3TWB5 , B3TW77 , B3TW07 , B3TW89 , B3TW39 , B3TW93 , B3TVT8 , B3TWA6 , B3TVX3 , B3TW99 , B3TWA0 , B3TWA8 , B3TWA2 , B3TW80 , B3TVY6 , A5Y431 , B3TW82 , A5Y424 , B3TWT4 , B3TW35 , B3TW45 , A5Y425 , B3TW87 , B3TW47 , A5Y409 , A5Y414 , B3TVU8 , B3TVU0 , B3TVX2 , B3TVU2 , B3TVT9 , B3TW33 , A5Y420 , A0A1B6PGV5 , B3TVV2 , B3TWM2 , B3TWC6
Pfam PF00483
Panther DB PTHR22572 PTHR22572:SF101
NCBI CDD KOG1322; GDP-mannose pyrophosphorylase/mannose-1-phosphate guanylyltransferase
KEGG Orthology K00975; glucose-1-phosphate adenylyltransferase
Gene Ontology GO:0016779; nucleotidyltransferase activity GO:0009058biosynthetic process


Orthologs (automatic annotation)
TAIR AT5G48300 : ADP glucose pyrophosphorylase 1
RAP-DB (Rice) LOC_Os08g25734.1,LOC_Os08g25734.2 : glucose-1-phosphate adenylyltransferase large subunit, chloroplast precursor, putative, expressed
MaizeGDB (Corn) Zm00025a013686 , Zm00025a030663 , Zm00025a006223 , Zm00025a037266
Brachypodium KQJ96293 , KQJ89760 , KQJ89759 , KQJ89758 , KQJ96292
Barley HORVU7Hr1G067620.4 , HORVU7Hr1G067620.2 , HORVU7Hr1G067620.3
Wheat TraesCS7A02G287400 , TraesCS7A02G287400 , TraesCS7B02G183300 , TraesCS7B02G183300 , TraesCS7D02G284900 , TraesCS7D02G284900 , TraesCS5B02G175800
Populus -


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cDNA sequences
Sobic.007G101500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G162900 expressed protein -
2 Sobic.006G013800 CBS domain containing membrane protein, putative, expressed -
3 Sobic.002G267900 expressed protein -
4 Sobic.008G171300 methyltransferase domain containing protein, putative, expressed K12502: VTE3, MPBQ/MSBQ methyltransferase
5 Sobic.003G271900 expressed protein -
6 Sobic.008G172700 OsDegp15 - Putative Deg protease homologue, expressed -
7 Sobic.004G020300 expressed protein -
8 Sobic.004G307400 peptidase, M24 family protein, putative, expressed K01265: methionyl aminopeptidase
9 Sobic.001G277400 expressed protein -
10 Sobic.001G368500 ribosomal protein L6, putative, expressed K02933: RP-L6, MRPL6, large subunit ribosomal protein L6
11 Sobic.004G343900 expressed protein -
12 Sobic.010G277600 - -
13 Sobic.009G183700 XP_002441313.1 plastidic phosphoglycerate kinase(PubMedID : 26904072)@phosphoglycerate kinase(PubMedID : 29017446)@phosphoglycerate kinase protein, putative, expressed K00927: PGK, phosphoglycerate kinase
14 Sobic.003G219200 MEE18, putative, expressed -
15 Sobic.003G225100 uroporphyrinogen decarboxylase, putative, expressed K01599: hemE, uroporphyrinogen decarboxylase
16 Sobic.004G183100 pentatricopeptide repeat domain containing protein, putative, expressed -
17 Sobic.007G143700 immunophilin(PubMedID : 29017446)@peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed -
18 Sobic.009G030800 expressed protein -
19 Sobic.007G208300 peptidase, putative, expressed K14677: aminoacylase
20 Sobic.004G239100 -(PubMedID : 26465154)@expressed protein -


Gene co-expression network
sample Sobic007G101500 Sobic007G101500 Sobic003G162900 Sobic003G162900 Sobic007G101500--Sobic003G162900 Sobic006G013800 Sobic006G013800 Sobic007G101500--Sobic006G013800 Sobic002G267900 Sobic002G267900 Sobic007G101500--Sobic002G267900 Sobic008G171300 Sobic008G171300 Sobic007G101500--Sobic008G171300 Sobic003G271900 Sobic003G271900 Sobic007G101500--Sobic003G271900 Sobic008G172700 Sobic008G172700 Sobic007G101500--Sobic008G172700 Sobic004G020300 Sobic004G020300 Sobic007G101500--Sobic004G020300 Sobic004G307400 Sobic004G307400 Sobic007G101500--Sobic004G307400 Sobic001G277400 Sobic001G277400 Sobic007G101500--Sobic001G277400 Sobic003G085000 Sobic003G085000 Sobic003G162900--Sobic003G085000 Sobic001G291900 Sobic001G291900 Sobic003G162900--Sobic001G291900 Sobic006G256600 Sobic006G256600 Sobic003G162900--Sobic006G256600 Sobic001G368500 Sobic001G368500 Sobic003G162900--Sobic001G368500 Sobic006G106400 Sobic006G106400 Sobic003G162900--Sobic006G106400 Sobic001G122400 Sobic001G122400 Sobic003G162900--Sobic001G122400 Sobic004G065300 Sobic004G065300 Sobic003G162900--Sobic004G065300 Sobic003G162900--Sobic003G271900 Sobic003G432500 Sobic003G432500 Sobic003G162900--Sobic003G432500 Sobic005G194100 Sobic005G194100 Sobic006G013800--Sobic005G194100 Sobic001G221300 Sobic001G221300 Sobic006G013800--Sobic001G221300 Sobic006G013800--Sobic008G172700 Sobic004G251500 Sobic004G251500 Sobic006G013800--Sobic004G251500 Sobic006G013800--Sobic002G267900 Sobic004G239100 Sobic004G239100 Sobic006G013800--Sobic004G239100 Sobic006G013800--Sobic004G020300 Sobic001G023700 Sobic001G023700 Sobic006G013800--Sobic001G023700 Sobic009G091850 Sobic009G091850 Sobic006G013800--Sobic009G091850 Sobic002G267900--Sobic008G172700 Sobic004G055000 Sobic004G055000 Sobic002G267900--Sobic004G055000 Sobic002G272100 Sobic002G272100 Sobic002G267900--Sobic002G272100 Sobic010G277600 Sobic010G277600 Sobic002G267900--Sobic010G277600 Sobic009G183700 Sobic009G183700 Sobic002G267900--Sobic009G183700 Sobic004G326500 Sobic004G326500 Sobic002G267900--Sobic004G326500 Sobic002G401800 Sobic002G401800 Sobic002G267900--Sobic002G401800 Sobic008G119300 Sobic008G119300 Sobic002G267900--Sobic008G119300 Sobic002G198000 Sobic002G198000 Sobic002G267900--Sobic002G198000 Sobic002G233700 Sobic002G233700 Sobic008G171300--Sobic002G233700 Sobic007G052400 Sobic007G052400 Sobic008G171300--Sobic007G052400 Sobic007G225500 Sobic007G225500 Sobic008G171300--Sobic007G225500 Sobic003G002300 Sobic003G002300 Sobic008G171300--Sobic003G002300 Sobic008G102000 Sobic008G102000 Sobic008G171300--Sobic008G102000 Sobic009G059300 Sobic009G059300 Sobic008G171300--Sobic009G059300 Sobic004G012900 Sobic004G012900 Sobic008G171300--Sobic004G012900 Sobic009G140600 Sobic009G140600 Sobic008G171300--Sobic009G140600 Sobic008G171300--Sobic009G183700 Sobic003G271900--Sobic001G368500 Sobic003G271900--Sobic003G432500 Sobic003G271900--Sobic002G272100 Sobic005G143500 Sobic005G143500 Sobic003G271900--Sobic005G143500 Sobic003G324700 Sobic003G324700 Sobic003G271900--Sobic003G324700 Sobic006G055800 Sobic006G055800 Sobic003G271900--Sobic006G055800 Sobic008G039600 Sobic008G039600 Sobic003G271900--Sobic008G039600 Sobic005G110400 Sobic005G110400 Sobic003G271900--Sobic005G110400 Sobic003G271900--Sobic006G106400 Sobic008G172700--Sobic002G267900 Sobic001G350000 Sobic001G350000 Sobic008G172700--Sobic001G350000 Sobic008G172700--Sobic004G239100 Sobic008G172700--Sobic004G055000 Sobic003G378600 Sobic003G378600 Sobic008G172700--Sobic003G378600 Sobic008G172700--Sobic010G277600 Sobic008G172700--Sobic009G183700 Sobic008G172700--Sobic008G171300 Sobic004G359600 Sobic004G359600 Sobic008G172700--Sobic004G359600 Sobic009G131800 Sobic009G131800 Sobic004G020300--Sobic009G131800 Sobic009G210200 Sobic009G210200 Sobic004G020300--Sobic009G210200 Sobic004G020300--Sobic002G272100 Sobic001G405700 Sobic001G405700 Sobic004G020300--Sobic001G405700 Sobic004G020300--Sobic002G267900 Sobic004G020300--Sobic008G172700 Sobic004G343000 Sobic004G343000 Sobic004G020300--Sobic004G343000 Sobic006G021600 Sobic006G021600 Sobic004G020300--Sobic006G021600 Sobic003G022300 Sobic003G022300 Sobic004G020300--Sobic003G022300 Sobic005G149400 Sobic005G149400 Sobic004G307400--Sobic005G149400 Sobic004G343900 Sobic004G343900 Sobic004G307400--Sobic004G343900 Sobic009G030800 Sobic009G030800 Sobic004G307400--Sobic009G030800 Sobic003G387100 Sobic003G387100 Sobic004G307400--Sobic003G387100 Sobic004G307400--Sobic001G291900 SobicK031800 SobicK031800 Sobic004G307400--SobicK031800 Sobic004G016400 Sobic004G016400 Sobic004G307400--Sobic004G016400 Sobic004G336000 Sobic004G336000 Sobic004G307400--Sobic004G336000 Sobic009G030900 Sobic009G030900 Sobic004G307400--Sobic009G030900 Sobic001G277400--Sobic003G271900 Sobic002G131700 Sobic002G131700 Sobic001G277400--Sobic002G131700 Sobic004G165000 Sobic004G165000 Sobic001G277400--Sobic004G165000 Sobic010G035200 Sobic010G035200 Sobic001G277400--Sobic010G035200 Sobic003G084500 Sobic003G084500 Sobic001G277400--Sobic003G084500 Sobic002G181000 Sobic002G181000 Sobic001G277400--Sobic002G181000 Sobic005G002900 Sobic005G002900 Sobic001G277400--Sobic005G002900 Sobic003G444500 Sobic003G444500 Sobic001G277400--Sobic003G444500 Sobic001G277400--Sobic004G065300
Octagon: transcription factors


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