Gene annotation
Transcriptome id Sobic.007G123400.1
Synonym Sb07g020040
Functional annotation heavy metal-associated domain containing protein, expressed
UniProt A0A1B6PHG4
Pfam PF00403
Panther DB PTHR22814:SF82 PTHR22814
NCBI CDD KOG1603; Copper chaperone
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G28660 : Chloroplast-targeted copper chaperone protein
RAP-DB (Rice) LOC_Os08g31340.1 : heavy metal-associated domain containing protein, expressed
MaizeGDB (Corn) Zm00025a031010
Brachypodium KQJ98211
Barley HORVU1Hr1G072500.3 , HORVU1Hr1G072500.2 , HORVU1Hr1G072500.1 , HORVU1Hr1G072500.5 , HORVU1Hr1G072500.4
Wheat TraesCS1A02G283600 , TraesCS1B02G292800
Populus -


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cDNA sequences
Sobic.007G123400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G351100 DNA repair protein Rad51, putative, expressed K04482: DNA repair protein RAD51
2 Sobic.001G300400 expansin precursor, putative, expressed -
3 Sobic.001G468000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@DUF677 domain containing protein, putative, expressed -
4 Sobic.003G297200 lipase, putative, expressed -
5 Sobic.006G013900 RNA polymerase subunit, putative, expressed K03008: RPB11, DNA-directed RNA polymerase II subunit RPB11
6 Sobic.003G041500 WD domain, G-beta repeat domain containing protein, expressed K14553: U3 small nucleolar RNA-associated protein 18
7 Sobic.002G253900 growth regulator related protein, putative, expressed -
8 Sobic.009G194900 glucan endo-1,3-beta-glucosidase-like protein 3 precursor, putative, expressed -
9 Sobic.010G212700 tetraspanin family protein, putative, expressed -
10 Sobic.001G440900 LSM domain containing protein, expressed K11088: SNRPD3, small nuclear ribonucleoprotein D3
11 Sobic.007G182500 bZIP family transcription factor, putative, expressed -
12 Sobic.006G267800 WD-40 repeat family protein, putative, expressed -
13 Sobic.003G208800 aspartic proteinase, putative, expressed -
14 Sobic.003G345000 CAMK_CAMK_like.1 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase
15 Sobic.010G265900 novel plant SNARE 11, putative, expressed K08494: novel plant SNARE
16 Sobic.010G079100 lysM domain-containing GPI-anchored protein 1 precursor, putative, expressed -
17 Sobic.006G218900 TKL_IRAK_CrRLK1L-1.9 - The CrRLK1L-1 subfamily has homology to the CrRLK1L homolog, expressed -
18 Sobic.010G118300 auxin-independent growth promoter protein, putative, expressed -
19 Sobic.002G051200 PHF5-like protein domain containing protein, expressed K12834: PHD finger-like domain-containing protein 5A
20 Sobic.001G123300 Os3bglu7 - beta-glucosidase, exo-beta-glucanse, expressed K05350: beta-glucosidase


Gene co-expression network
sample Sobic007G123400 Sobic007G123400 Sobic002G351100 Sobic002G351100 Sobic007G123400--Sobic002G351100 Sobic001G300400 Sobic001G300400 Sobic007G123400--Sobic001G300400 Sobic001G468000 Sobic001G468000 Sobic007G123400--Sobic001G468000 Sobic003G297200 Sobic003G297200 Sobic007G123400--Sobic003G297200 Sobic006G013900 Sobic006G013900 Sobic007G123400--Sobic006G013900 Sobic003G041500 Sobic003G041500 Sobic007G123400--Sobic003G041500 Sobic002G253900 Sobic002G253900 Sobic007G123400--Sobic002G253900 Sobic009G194900 Sobic009G194900 Sobic007G123400--Sobic009G194900 Sobic010G212700 Sobic010G212700 Sobic007G123400--Sobic010G212700 Sobic002G351100--Sobic001G300400 Sobic002G351100--Sobic003G297200 Sobic001G521100 Sobic001G521100 Sobic002G351100--Sobic001G521100 Sobic003G244000 Sobic003G244000 Sobic002G351100--Sobic003G244000 Sobic002G315400 Sobic002G315400 Sobic002G351100--Sobic002G315400 Sobic002G351100--Sobic009G194900 Sobic001G440900 Sobic001G440900 Sobic002G351100--Sobic001G440900 Sobic002G246900 Sobic002G246900 Sobic002G351100--Sobic002G246900 Sobic001G238900 Sobic001G238900 Sobic002G351100--Sobic001G238900 Sobic001G300400--Sobic002G351100 Sobic001G289900 Sobic001G289900 Sobic001G300400--Sobic001G289900 Sobic006G236800 Sobic006G236800 Sobic001G300400--Sobic006G236800 Sobic001G300400--Sobic003G297200 Sobic004G047100 Sobic004G047100 Sobic001G300400--Sobic004G047100 Sobic002G289800 Sobic002G289800 Sobic001G300400--Sobic002G289800 Sobic002G426800 Sobic002G426800 Sobic001G300400--Sobic002G426800 Sobic003G102000 Sobic003G102000 Sobic001G300400--Sobic003G102000 Sobic001G091500 Sobic001G091500 Sobic001G300400--Sobic001G091500 Sobic006G066400 Sobic006G066400 Sobic001G468000--Sobic006G066400 Sobic001G468000--Sobic010G212700 Sobic006G272800 Sobic006G272800 Sobic001G468000--Sobic006G272800 Sobic002G196500 Sobic002G196500 Sobic001G468000--Sobic002G196500 Sobic002G284100 Sobic002G284100 Sobic001G468000--Sobic002G284100 Sobic001G158300 Sobic001G158300 Sobic001G468000--Sobic001G158300 Sobic010G180200 Sobic010G180200 Sobic001G468000--Sobic010G180200 Sobic002G302600 Sobic002G302600 Sobic001G468000--Sobic002G302600 Sobic001G171100 Sobic001G171100 Sobic001G468000--Sobic001G171100 Sobic003G297200--Sobic002G351100 Sobic003G297200--Sobic001G300400 Sobic003G297200--Sobic006G236800 Sobic003G297200--Sobic001G521100 Sobic003G297200--Sobic002G246900 Sobic003G297200--Sobic002G315400 Sobic007G084200 Sobic007G084200 Sobic003G297200--Sobic007G084200 Sobic003G297200--Sobic003G244000 Sobic002G190000 Sobic002G190000 Sobic003G297200--Sobic002G190000 Sobic006G231700 Sobic006G231700 Sobic006G013900--Sobic006G231700 Sobic002G051200 Sobic002G051200 Sobic006G013900--Sobic002G051200 Sobic001G162800 Sobic001G162800 Sobic006G013900--Sobic001G162800 Sobic004G137900 Sobic004G137900 Sobic006G013900--Sobic004G137900 Sobic001G154400 Sobic001G154400 Sobic006G013900--Sobic001G154400 Sobic004G343600 Sobic004G343600 Sobic006G013900--Sobic004G343600 Sobic002G331300 Sobic002G331300 Sobic006G013900--Sobic002G331300 Sobic005G206700 Sobic005G206700 Sobic006G013900--Sobic005G206700 Sobic002G386300 Sobic002G386300 Sobic006G013900--Sobic002G386300 Sobic010G265900 Sobic010G265900 Sobic003G041500--Sobic010G265900 Sobic003G396600 Sobic003G396600 Sobic003G041500--Sobic003G396600 Sobic002G184900 Sobic002G184900 Sobic003G041500--Sobic002G184900 Sobic002G091000 Sobic002G091000 Sobic003G041500--Sobic002G091000 Sobic004G085700 Sobic004G085700 Sobic003G041500--Sobic004G085700 Sobic003G041500--Sobic007G123400 Sobic005G080900 Sobic005G080900 Sobic003G041500--Sobic005G080900 Sobic006G200000 Sobic006G200000 Sobic003G041500--Sobic006G200000 Sobic003G041500--Sobic004G343600 Sobic009G148000 Sobic009G148000 Sobic002G253900--Sobic009G148000 Sobic001G123100 Sobic001G123100 Sobic002G253900--Sobic001G123100 Sobic006G200901 Sobic006G200901 Sobic002G253900--Sobic006G200901 Sobic002G343000 Sobic002G343000 Sobic002G253900--Sobic002G343000 Sobic001G005800 Sobic001G005800 Sobic002G253900--Sobic001G005800 Sobic001G540700 Sobic001G540700 Sobic002G253900--Sobic001G540700 Sobic006G218900 Sobic006G218900 Sobic002G253900--Sobic006G218900 Sobic002G253900--Sobic002G284100 Sobic002G006100 Sobic002G006100 Sobic002G253900--Sobic002G006100 Sobic001G261549 Sobic001G261549 Sobic009G194900--Sobic001G261549 Sobic009G194900--Sobic002G351100 Sobic006G102900 Sobic006G102900 Sobic009G194900--Sobic006G102900 Sobic003G107200 Sobic003G107200 Sobic009G194900--Sobic003G107200 Sobic001G255600 Sobic001G255600 Sobic009G194900--Sobic001G255600 Sobic006G134200 Sobic006G134200 Sobic009G194900--Sobic006G134200 Sobic002G230800 Sobic002G230800 Sobic009G194900--Sobic002G230800 Sobic009G194900--Sobic002G246900 Sobic009G194900--Sobic004G047100 Sobic010G212700--Sobic001G171100 Sobic010G212700--Sobic001G468000 Sobic003G022900 Sobic003G022900 Sobic010G212700--Sobic003G022900 Sobic010G212700--Sobic006G066400 Sobic010G212700--Sobic010G180200 Sobic010G212700--Sobic002G196500 Sobic004G218000 Sobic004G218000 Sobic010G212700--Sobic004G218000 Sobic002G374200 Sobic002G374200 Sobic010G212700--Sobic002G374200 Sobic004G014100 Sobic004G014100 Sobic010G212700--Sobic004G014100
Octagon: transcription factors


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