Gene annotation
Transcriptome id Sobic.007G158000.1
Synonym Sb07g023150
Functional annotation expressed protein
UniProt C5YML6
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os08g37070.1 : expressed protein
MaizeGDB (Corn) Zm00025a005439
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G195600 expressed protein K14376: poly(A) polymerase
2 Sobic.010G198600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
3 Sobic.003G027400 VQ domain containing protein, putative, expressed -
4 Sobic.006G046900 expressed protein -
5 Sobic.001G280800 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
6 Sobic.008G162700 fatty acid hydroxylase, putative, expressed K14423: plant 4,4-dimethylsterol C-4alpha-methyl-monooxygenase
7 Sobic.009G148100 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
8 Sobic.004G004400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@lactate/malate dehydrogenase, putative, expressed K00016: LDH, L-lactate dehydrogenase
9 Sobic.006G191800 Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11254: histone H4
10 Sobic.010G221300 expressed protein -
11 Sobic.003G117500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@RALFL9 - Rapid ALkalinization Factor RALF family protein precursor, expressed -
12 Sobic.003G000700 DNA binding protein, putative, expressed -
13 Sobic.002G323300 ankyrin repeat family protein, putative, expressed -
14 Sobic.001G083450 - -
15 Sobic.006G218000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
16 Sobic.009G171500 expressed protein -
17 Sobic.002G387900 expressed protein -
18 Sobic.004G015900 expressed protein -
19 Sobic.001G475500 ras-related protein, putative, expressed K07904: Ras-related protein Rab-11A
20 Sobic.001G487600 Lectin protein kinase family protein("PubMedID : 26759170,PubMedID : 24597475")@protein kinase domain containing protein, expressed -


Gene co-expression network
sample Sobic007G158000 Sobic007G158000 Sobic006G195600 Sobic006G195600 Sobic007G158000--Sobic006G195600 Sobic010G198600 Sobic010G198600 Sobic007G158000--Sobic010G198600 Sobic003G027400 Sobic003G027400 Sobic007G158000--Sobic003G027400 Sobic006G046900 Sobic006G046900 Sobic007G158000--Sobic006G046900 Sobic001G280800 Sobic001G280800 Sobic007G158000--Sobic001G280800 Sobic008G162700 Sobic008G162700 Sobic007G158000--Sobic008G162700 Sobic009G148100 Sobic009G148100 Sobic007G158000--Sobic009G148100 Sobic004G004400 Sobic004G004400 Sobic007G158000--Sobic004G004400 Sobic006G191800 Sobic006G191800 Sobic007G158000--Sobic006G191800 Sobic009G031900 Sobic009G031900 Sobic006G195600--Sobic009G031900 Sobic006G195600--Sobic007G158000 Sobic003G014600 Sobic003G014600 Sobic006G195600--Sobic003G014600 Sobic006G195600--Sobic004G004400 Sobic010G221300 Sobic010G221300 Sobic006G195600--Sobic010G221300 Sobic001G279300 Sobic001G279300 Sobic006G195600--Sobic001G279300 Sobic006G195600--Sobic001G280800 Sobic010G167800 Sobic010G167800 Sobic006G195600--Sobic010G167800 Sobic001G201200 Sobic001G201200 Sobic006G195600--Sobic001G201200 Sobic010G198600--Sobic001G280800 Sobic001G138600 Sobic001G138600 Sobic010G198600--Sobic001G138600 Sobic003G382800 Sobic003G382800 Sobic010G198600--Sobic003G382800 Sobic001G169500 Sobic001G169500 Sobic010G198600--Sobic001G169500 Sobic004G336500 Sobic004G336500 Sobic010G198600--Sobic004G336500 Sobic006G190100 Sobic006G190100 Sobic010G198600--Sobic006G190100 Sobic002G261200 Sobic002G261200 Sobic010G198600--Sobic002G261200 Sobic003G432700 Sobic003G432700 Sobic010G198600--Sobic003G432700 Sobic009G184000 Sobic009G184000 Sobic010G198600--Sobic009G184000 Sobic003G160700 Sobic003G160700 Sobic003G027400--Sobic003G160700 Sobic006G249300 Sobic006G249300 Sobic003G027400--Sobic006G249300 Sobic009G248100 Sobic009G248100 Sobic003G027400--Sobic009G248100 Sobic003G027400--Sobic010G221300 Sobic001G481000 Sobic001G481000 Sobic003G027400--Sobic001G481000 Sobic005G113300 Sobic005G113300 Sobic003G027400--Sobic005G113300 Sobic002G387900 Sobic002G387900 Sobic003G027400--Sobic002G387900 Sobic003G084400 Sobic003G084400 Sobic003G027400--Sobic003G084400 Sobic002G200600 Sobic002G200600 Sobic003G027400--Sobic002G200600 Sobic006G046900--Sobic001G169500 Sobic005G011300 Sobic005G011300 Sobic006G046900--Sobic005G011300 Sobic006G046900--Sobic006G249300 Sobic001G139100 Sobic001G139100 Sobic006G046900--Sobic001G139100 Sobic003G377100 Sobic003G377100 Sobic006G046900--Sobic003G377100 Sobic001G459800 Sobic001G459800 Sobic006G046900--Sobic001G459800 Sobic008G186100 Sobic008G186100 Sobic006G046900--Sobic008G186100 Sobic006G046900--Sobic004G336500 Sobic002G068600 Sobic002G068600 Sobic006G046900--Sobic002G068600 Sobic001G280800--Sobic010G198600 Sobic001G280800--Sobic004G336500 Sobic001G280800--Sobic001G279300 Sobic009G069800 Sobic009G069800 Sobic001G280800--Sobic009G069800 Sobic001G280800--Sobic004G004400 Sobic010G225251 Sobic010G225251 Sobic001G280800--Sobic010G225251 Sobic009G145700 Sobic009G145700 Sobic001G280800--Sobic009G145700 Sobic008G066401 Sobic008G066401 Sobic001G280800--Sobic008G066401 Sobic004G109900 Sobic004G109900 Sobic001G280800--Sobic004G109900 Sobic001G525200 Sobic001G525200 Sobic008G162700--Sobic001G525200 Sobic003G145400 Sobic003G145400 Sobic008G162700--Sobic003G145400 Sobic008G162700--Sobic004G336500 Sobic008G162700--Sobic010G198600 Sobic010G031100 Sobic010G031100 Sobic008G162700--Sobic010G031100 Sobic008G162700--Sobic010G225251 Sobic008G162700--Sobic009G069800 Sobic008G162700--Sobic001G280800 Sobic008G162700--Sobic009G148100 Sobic009G148100--Sobic006G190100 Sobic009G148100--Sobic010G198600 Sobic001G105900 Sobic001G105900 Sobic009G148100--Sobic001G105900 Sobic006G190500 Sobic006G190500 Sobic009G148100--Sobic006G190500 Sobic001G076100 Sobic001G076100 Sobic009G148100--Sobic001G076100 Sobic001G443800 Sobic001G443800 Sobic009G148100--Sobic001G443800 Sobic002G389000 Sobic002G389000 Sobic009G148100--Sobic002G389000 Sobic004G088300 Sobic004G088300 Sobic009G148100--Sobic004G088300 Sobic002G291900 Sobic002G291900 Sobic009G148100--Sobic002G291900 Sobic004G004400--Sobic001G280800 Sobic004G004400--Sobic010G198600 Sobic004G004400--Sobic006G190100 Sobic003G142300 Sobic003G142300 Sobic004G004400--Sobic003G142300 Sobic004G004400--Sobic009G148100 Sobic004G004400--Sobic001G279300 Sobic004G004400--Sobic002G261200 Sobic006G054800 Sobic006G054800 Sobic004G004400--Sobic006G054800 Sobic003G362700 Sobic003G362700 Sobic004G004400--Sobic003G362700 Sobic006G191800--Sobic010G221300 Sobic001G529400 Sobic001G529400 Sobic006G191800--Sobic001G529400 Sobic010G047100 Sobic010G047100 Sobic006G191800--Sobic010G047100 Sobic001G361600 Sobic001G361600 Sobic006G191800--Sobic001G361600 Sobic003G125650 Sobic003G125650 Sobic006G191800--Sobic003G125650 Sobic001G313200 Sobic001G313200 Sobic006G191800--Sobic001G313200 Sobic002G389400 Sobic002G389400 Sobic006G191800--Sobic002G389400 Sobic001G295200 Sobic001G295200 Sobic006G191800--Sobic001G295200 Sobic006G191800--Sobic003G160700
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.