Gene annotation
Transcriptome id Sobic.008G010200.1,Sobic.008G010200.2
Synonym Sb08g000960
Functional annotation expressed protein
UniProt A0A1Z5R498 , C5YQ65
Pfam -
Panther DB PTHR35740 PTHR35740:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G56250 : -
RAP-DB (Rice) LOC_Os11g02090.2,LOC_Os12g02050.1 : expressed protein
MaizeGDB (Corn) Zm00025a053666
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G108100 co-chaperone protein SBA1, putative, expressed -
2 Sobic.002G057500 C-Myc-binding protein, putative, expressed -
3 Sobic.006G016500 kinase, pfkB family, putative, expressed -
4 Sobic.010G238800 glycosyltransferase family 43 protein, putative, expressed -
5 Sobic.003G011100 reticulon domain containing protein, putative, expressed -
6 Sobic.001G195000 protein kinase domain containing protein, expressed K04730: interleukin-1 receptor-associated kinase 1
7 Sobic.001G412500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein K18732: SARNP, CIP29, SAP domain-containing ribonucleoprotein
8 Sobic.009G165500 Lung seven transmembrane receptor domain containing protein, putative, expressed -
9 Sobic.001G427600 ZOS3-08 - C2H2 zinc finger protein, expressed -
10 Sobic.004G252800 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@zinc finger, C3HC4 type domain containing protein, expressed -
11 Sobic.010G210000 ubiquitin family protein, putative, expressed K12158: ubiquitin-like protein Nedd8
12 Sobic.006G216400 "domain confirmed by Pfam database, expression not supported"(PubMedID : 20499123)@SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@OsSAUR21 - Auxin-responsive SAUR gene family member, expressed K14488: SAUR family protein
13 Sobic.001G352500 expressed protein -
14 Sobic.001G459900 leucine-rich repeat resistance protein, putative, expressed -
15 Sobic.003G084300 mediator of RNA polymerase II transcription subunit 22, putative, expressed K15139: mediator of RNA polymerase II transcription subunit 22
16 Sobic.006G149200 LSM domain containing protein, expressed K11096: SNRPD2, small nuclear ribonucleoprotein D2
17 Sobic.001G086200 COBRA, putative, expressed -
18 Sobic.002G254650 - -
19 Sobic.003G344600 BAG domain containing protein, expressed -
20 Sobic.009G220100 exostosin family domain containing protein, expressed -


Gene co-expression network
sample Sobic008G010200 Sobic008G010200 Sobic007G108100 Sobic007G108100 Sobic008G010200--Sobic007G108100 Sobic002G057500 Sobic002G057500 Sobic008G010200--Sobic002G057500 Sobic006G016500 Sobic006G016500 Sobic008G010200--Sobic006G016500 Sobic010G238800 Sobic010G238800 Sobic008G010200--Sobic010G238800 Sobic003G011100 Sobic003G011100 Sobic008G010200--Sobic003G011100 Sobic001G195000 Sobic001G195000 Sobic008G010200--Sobic001G195000 Sobic001G412500 Sobic001G412500 Sobic008G010200--Sobic001G412500 Sobic009G165500 Sobic009G165500 Sobic008G010200--Sobic009G165500 Sobic001G427600 Sobic001G427600 Sobic008G010200--Sobic001G427600 Sobic010G001800 Sobic010G001800 Sobic007G108100--Sobic010G001800 Sobic010G018000 Sobic010G018000 Sobic007G108100--Sobic010G018000 Sobic007G108100--Sobic003G011100 Sobic003G211100 Sobic003G211100 Sobic007G108100--Sobic003G211100 Sobic002G045100 Sobic002G045100 Sobic007G108100--Sobic002G045100 Sobic009G012700 Sobic009G012700 Sobic007G108100--Sobic009G012700 Sobic001G493400 Sobic001G493400 Sobic007G108100--Sobic001G493400 Sobic001G530800 Sobic001G530800 Sobic007G108100--Sobic001G530800 Sobic009G211700 Sobic009G211700 Sobic007G108100--Sobic009G211700 Sobic009G189200 Sobic009G189200 Sobic002G057500--Sobic009G189200 Sobic001G261549 Sobic001G261549 Sobic002G057500--Sobic001G261549 Sobic010G265900 Sobic010G265900 Sobic002G057500--Sobic010G265900 Sobic002G057500--Sobic003G011100 Sobic006G102900 Sobic006G102900 Sobic002G057500--Sobic006G102900 Sobic004G285900 Sobic004G285900 Sobic002G057500--Sobic004G285900 Sobic009G088200 Sobic009G088200 Sobic002G057500--Sobic009G088200 Sobic006G278100 Sobic006G278100 Sobic002G057500--Sobic006G278100 Sobic006G191700 Sobic006G191700 Sobic002G057500--Sobic006G191700 Sobic006G016500--Sobic002G057500 Sobic006G016500--Sobic009G012700 Sobic010G004900 Sobic010G004900 Sobic006G016500--Sobic010G004900 Sobic010G213200 Sobic010G213200 Sobic006G016500--Sobic010G213200 Sobic006G016500--Sobic010G001800 Sobic001G440900 Sobic001G440900 Sobic006G016500--Sobic001G440900 Sobic001G505000 Sobic001G505000 Sobic006G016500--Sobic001G505000 Sobic006G016500--Sobic001G412500 Sobic001G404700 Sobic001G404700 Sobic006G016500--Sobic001G404700 Sobic009G220100 Sobic009G220100 Sobic010G238800--Sobic009G220100 Sobic006G156000 Sobic006G156000 Sobic010G238800--Sobic006G156000 Sobic010G052200 Sobic010G052200 Sobic010G238800--Sobic010G052200 Sobic003G344600 Sobic003G344600 Sobic010G238800--Sobic003G344600 Sobic008G103700 Sobic008G103700 Sobic010G238800--Sobic008G103700 Sobic003G443300 Sobic003G443300 Sobic010G238800--Sobic003G443300 Sobic002G128800 Sobic002G128800 Sobic010G238800--Sobic002G128800 Sobic005G168100 Sobic005G168100 Sobic010G238800--Sobic005G168100 Sobic001G084100 Sobic001G084100 Sobic010G238800--Sobic001G084100 Sobic007G150800 Sobic007G150800 Sobic003G011100--Sobic007G150800 Sobic006G216600 Sobic006G216600 Sobic003G011100--Sobic006G216600 Sobic001G475500 Sobic001G475500 Sobic003G011100--Sobic001G475500 Sobic006G201500 Sobic006G201500 Sobic003G011100--Sobic006G201500 Sobic003G396600 Sobic003G396600 Sobic003G011100--Sobic003G396600 Sobic009G144300 Sobic009G144300 Sobic003G011100--Sobic009G144300 Sobic006G115000 Sobic006G115000 Sobic003G011100--Sobic006G115000 Sobic003G387900 Sobic003G387900 Sobic003G011100--Sobic003G387900 Sobic009G233400 Sobic009G233400 Sobic003G011100--Sobic009G233400 Sobic003G424950 Sobic003G424950 Sobic001G195000--Sobic003G424950 Sobic003G151300 Sobic003G151300 Sobic001G195000--Sobic003G151300 Sobic001G107200 Sobic001G107200 Sobic001G195000--Sobic001G107200 Sobic005G169700 Sobic005G169700 Sobic001G195000--Sobic005G169700 Sobic009G026200 Sobic009G026200 Sobic001G195000--Sobic009G026200 Sobic001G339400 Sobic001G339400 Sobic001G195000--Sobic001G339400 Sobic010G224900 Sobic010G224900 Sobic001G195000--Sobic010G224900 Sobic001G352500 Sobic001G352500 Sobic001G195000--Sobic001G352500 Sobic010G086800 Sobic010G086800 Sobic001G195000--Sobic010G086800 Sobic001G412500--Sobic009G165500 Sobic003G084300 Sobic003G084300 Sobic001G412500--Sobic003G084300 Sobic004G343600 Sobic004G343600 Sobic001G412500--Sobic004G343600 Sobic006G013900 Sobic006G013900 Sobic001G412500--Sobic006G013900 Sobic004G208100 Sobic004G208100 Sobic001G412500--Sobic004G208100 Sobic001G107300 Sobic001G107300 Sobic001G412500--Sobic001G107300 Sobic001G150033 Sobic001G150033 Sobic001G412500--Sobic001G150033 Sobic001G412500--Sobic001G261549 Sobic001G528600 Sobic001G528600 Sobic001G412500--Sobic001G528600 Sobic009G165500--Sobic003G084300 Sobic009G165500--Sobic001G505000 Sobic006G149200 Sobic006G149200 Sobic009G165500--Sobic006G149200 Sobic009G165500--Sobic010G238800 Sobic010G054200 Sobic010G054200 Sobic009G165500--Sobic010G054200 Sobic001G429000 Sobic001G429000 Sobic009G165500--Sobic001G429000 Sobic008G135000 Sobic008G135000 Sobic009G165500--Sobic008G135000 Sobic009G165500--Sobic001G412500 Sobic009G165500--Sobic006G201500 Sobic007G165000 Sobic007G165000 Sobic001G427600--Sobic007G165000 Sobic001G479600 Sobic001G479600 Sobic001G427600--Sobic001G479600 Sobic001G331700 Sobic001G331700 Sobic001G427600--Sobic001G331700 Sobic003G212800 Sobic003G212800 Sobic001G427600--Sobic003G212800 Sobic002G267300 Sobic002G267300 Sobic001G427600--Sobic002G267300 Sobic010G088400 Sobic010G088400 Sobic001G427600--Sobic010G088400 Sobic006G069400 Sobic006G069400 Sobic001G427600--Sobic006G069400 Sobic007G193500 Sobic007G193500 Sobic001G427600--Sobic007G193500 Sobic009G067200 Sobic009G067200 Sobic001G427600--Sobic009G067200
Octagon: transcription factors


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