Gene annotation
Transcriptome id Sobic.006G016500.4,Sobic.006G016500.6,Sobic.006G016500.5,Sobic.006G016500.1,Sobic.006G016500.3
Synonym Sb06g001570
Functional annotation kinase, pfkB family, putative, expressed
UniProt C5YC76
Pfam PF01575
Panther DB PTHR13078
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G60335 : Thioesterase superfamily protein
RAP-DB (Rice) LOC_Os05g09370.3 : kinase, pfkB family, putative, expressed
MaizeGDB (Corn) Zm00025a016412 , Zm00025a012318
Brachypodium KQK11973 , KQK11972
Barley HORVU1Hr1G078310.4 , HORVU1Hr1G078310.3 , HORVU1Hr1G082150.3 , HORVU1Hr1G082150.2 , HORVU1Hr1G082150.1 , HORVU1Hr1G082150.4
Wheat TraesCS1A02G370000 , TraesCS1B02G359500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G057500 C-Myc-binding protein, putative, expressed -
2 Sobic.009G012700 LSM domain containing protein, expressed K11096: SNRPD2, small nuclear ribonucleoprotein D2
3 Sobic.010G004900 CWC15 homolog A, putative, expressed K12863: protein CWC15
4 Sobic.010G213200 WD domain, G-beta repeat domain containing protein, expressed K12857: SNRNP40, Prp8 binding protein
5 Sobic.010G001800 DNA-binding protein-related, putative, expressed K07466: RFA1, RPA1, replication factor A1
6 Sobic.001G440900 LSM domain containing protein, expressed K11088: SNRPD3, small nuclear ribonucleoprotein D3
7 Sobic.001G505000 cyclin-dependent kinases regulatory subunit 1, putative, expressed K02219: cyclin-dependent kinase regulatory subunit CKS1
8 Sobic.001G412500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein K18732: SARNP, CIP29, SAP domain-containing ribonucleoprotein
9 Sobic.001G404700 protein kinase, putative, expressed -
10 Sobic.001G261549 - -
11 Sobic.008G096200 AGC_PVPK_like_kin82y.19 - ACG kinases include homologs to PKA, PKG and PKC, expressed -
12 Sobic.004G062400 LSM domain containing protein, expressed K11098: SNRPF, small nuclear ribonucleoprotein F
13 Sobic.004G285900 HMG1/2, putative, expressed -
14 Sobic.006G207400 expressed protein -
15 Sobic.003G011100 reticulon domain containing protein, putative, expressed -
16 Sobic.010G210000 ubiquitin family protein, putative, expressed K12158: ubiquitin-like protein Nedd8
17 Sobic.002G371200 LSM domain containing protein, expressed K11099: SNRPG, small nuclear ribonucleoprotein G
18 Sobic.007G108100 co-chaperone protein SBA1, putative, expressed -
19 Sobic.009G258600 LSM domain containing protein, expressed K12627: U6 snRNA-associated Sm-like protein LSm8
20 Sobic.008G010200 expressed protein -


Gene co-expression network
sample Sobic006G016500 Sobic006G016500 Sobic002G057500 Sobic002G057500 Sobic006G016500--Sobic002G057500 Sobic009G012700 Sobic009G012700 Sobic006G016500--Sobic009G012700 Sobic010G004900 Sobic010G004900 Sobic006G016500--Sobic010G004900 Sobic010G213200 Sobic010G213200 Sobic006G016500--Sobic010G213200 Sobic010G001800 Sobic010G001800 Sobic006G016500--Sobic010G001800 Sobic001G440900 Sobic001G440900 Sobic006G016500--Sobic001G440900 Sobic001G505000 Sobic001G505000 Sobic006G016500--Sobic001G505000 Sobic001G412500 Sobic001G412500 Sobic006G016500--Sobic001G412500 Sobic001G404700 Sobic001G404700 Sobic006G016500--Sobic001G404700 Sobic009G189200 Sobic009G189200 Sobic002G057500--Sobic009G189200 Sobic001G261549 Sobic001G261549 Sobic002G057500--Sobic001G261549 Sobic010G265900 Sobic010G265900 Sobic002G057500--Sobic010G265900 Sobic003G011100 Sobic003G011100 Sobic002G057500--Sobic003G011100 Sobic006G102900 Sobic006G102900 Sobic002G057500--Sobic006G102900 Sobic004G285900 Sobic004G285900 Sobic002G057500--Sobic004G285900 Sobic009G088200 Sobic009G088200 Sobic002G057500--Sobic009G088200 Sobic006G278100 Sobic006G278100 Sobic002G057500--Sobic006G278100 Sobic006G191700 Sobic006G191700 Sobic002G057500--Sobic006G191700 Sobic008G149450 Sobic008G149450 Sobic009G012700--Sobic008G149450 Sobic004G342400 Sobic004G342400 Sobic009G012700--Sobic004G342400 Sobic006G115000 Sobic006G115000 Sobic009G012700--Sobic006G115000 Sobic002G045100 Sobic002G045100 Sobic009G012700--Sobic002G045100 Sobic003G287300 Sobic003G287300 Sobic009G012700--Sobic003G287300 Sobic010G210000 Sobic010G210000 Sobic009G012700--Sobic010G210000 Sobic010G023900 Sobic010G023900 Sobic009G012700--Sobic010G023900 Sobic009G012700--Sobic003G011100 Sobic004G002350 Sobic004G002350 Sobic009G012700--Sobic004G002350 Sobic010G004900--Sobic009G189200 Sobic002G297500 Sobic002G297500 Sobic010G004900--Sobic002G297500 Sobic006G119300 Sobic006G119300 Sobic010G004900--Sobic006G119300 Sobic003G201000 Sobic003G201000 Sobic010G004900--Sobic003G201000 Sobic010G004900--Sobic006G102900 Sobic005G144600 Sobic005G144600 Sobic010G004900--Sobic005G144600 Sobic010G105400 Sobic010G105400 Sobic010G004900--Sobic010G105400 Sobic001G521100 Sobic001G521100 Sobic010G004900--Sobic001G521100 Sobic002G113400 Sobic002G113400 Sobic010G004900--Sobic002G113400 Sobic004G062400 Sobic004G062400 Sobic010G213200--Sobic004G062400 Sobic001G481700 Sobic001G481700 Sobic010G213200--Sobic001G481700 Sobic010G100000 Sobic010G100000 Sobic010G213200--Sobic010G100000 Sobic007G152400 Sobic007G152400 Sobic010G213200--Sobic007G152400 Sobic005G050500 Sobic005G050500 Sobic010G213200--Sobic005G050500 Sobic002G428200 Sobic002G428200 Sobic010G213200--Sobic002G428200 Sobic002G257400 Sobic002G257400 Sobic010G213200--Sobic002G257400 Sobic001G517600 Sobic001G517600 Sobic010G213200--Sobic001G517600 Sobic004G224900 Sobic004G224900 Sobic010G213200--Sobic004G224900 Sobic010G001800--Sobic001G440900 Sobic007G108100 Sobic007G108100 Sobic010G001800--Sobic007G108100 Sobic002G241500 Sobic002G241500 Sobic010G001800--Sobic002G241500 Sobic010G159100 Sobic010G159100 Sobic010G001800--Sobic010G159100 Sobic010G001800--Sobic001G505000 Sobic008G008300 Sobic008G008300 Sobic010G001800--Sobic008G008300 Sobic008G093200 Sobic008G093200 Sobic010G001800--Sobic008G093200 Sobic001G108400 Sobic001G108400 Sobic010G001800--Sobic001G108400 Sobic009G001200 Sobic009G001200 Sobic010G001800--Sobic009G001200 Sobic002G351100 Sobic002G351100 Sobic001G440900--Sobic002G351100 Sobic001G300400 Sobic001G300400 Sobic001G440900--Sobic001G300400 Sobic001G440900--Sobic010G001800 Sobic001G289900 Sobic001G289900 Sobic001G440900--Sobic001G289900 Sobic004G327600 Sobic004G327600 Sobic001G440900--Sobic004G327600 Sobic001G235700 Sobic001G235700 Sobic001G440900--Sobic001G235700 Sobic001G107300 Sobic001G107300 Sobic001G440900--Sobic001G107300 Sobic002G289800 Sobic002G289800 Sobic001G440900--Sobic002G289800 Sobic007G153700 Sobic007G153700 Sobic001G440900--Sobic007G153700 Sobic009G165500 Sobic009G165500 Sobic001G505000--Sobic009G165500 Sobic001G505000--Sobic001G107300 Sobic006G149200 Sobic006G149200 Sobic001G505000--Sobic006G149200 Sobic001G505000--Sobic002G289800 Sobic010G222100 Sobic010G222100 Sobic001G505000--Sobic010G222100 Sobic001G505000--Sobic006G115000 Sobic006G013900 Sobic006G013900 Sobic001G505000--Sobic006G013900 Sobic001G429000 Sobic001G429000 Sobic001G505000--Sobic001G429000 Sobic003G174700 Sobic003G174700 Sobic001G505000--Sobic003G174700 Sobic001G412500--Sobic009G165500 Sobic003G084300 Sobic003G084300 Sobic001G412500--Sobic003G084300 Sobic004G343600 Sobic004G343600 Sobic001G412500--Sobic004G343600 Sobic001G412500--Sobic006G013900 Sobic004G208100 Sobic004G208100 Sobic001G412500--Sobic004G208100 Sobic001G412500--Sobic001G107300 Sobic001G150033 Sobic001G150033 Sobic001G412500--Sobic001G150033 Sobic001G412500--Sobic001G261549 Sobic001G528600 Sobic001G528600 Sobic001G412500--Sobic001G528600 Sobic006G189200 Sobic006G189200 Sobic001G404700--Sobic006G189200 Sobic001G404700--Sobic001G108400 Sobic003G412800 Sobic003G412800 Sobic001G404700--Sobic003G412800 Sobic010G079100 Sobic010G079100 Sobic001G404700--Sobic010G079100 Sobic001G404700--Sobic004G208100 Sobic004G309800 Sobic004G309800 Sobic001G404700--Sobic004G309800 Sobic003G230000 Sobic003G230000 Sobic001G404700--Sobic003G230000 Sobic002G151400 Sobic002G151400 Sobic001G404700--Sobic002G151400 Sobic002G230800 Sobic002G230800 Sobic001G404700--Sobic002G230800
Octagon: transcription factors


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