Gene annotation
Transcriptome id Sobic.008G010600.1
Synonym Sb08g001000
Functional annotation plant viral response family protein, putative, expressed
UniProt C5YQ76
Pfam PF04819
Panther DB PTHR16007
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G32120 : -
RAP-DB (Rice) LOC_Os11g40570.2 : plant viral response family protein, putative, expressed
MaizeGDB (Corn) Zm00025a042169 , Zm00025a029304
Brachypodium KQJ87741
Barley -
Wheat TraesCS2A02G466000 , TraesCS2D02G466300 , TraesCS3A02G463700 , TraesCS2A02G465800 , TraesCSU02G212900 , TraesCS2B02G487900 , TraesCS3B02G507100
Populus -


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cDNA sequences
Sobic.008G010600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G261800 sugar-responsive gene(PubMedID : 25496467)@pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha, putative, expressed K00895: pfp, diphosphate-dependent phosphofructokinase
2 Sobic.010G253200 GHMP kinases ATP-binding protein, putative, expressed K12446: L-arabinokinase
3 Sobic.002G186200 ASC1, putative, expressed K04710: CERS1_2_3_4, ceramide synthetase
4 Sobic.002G420100 glycosyl transferase, family 8, putative, expressed K13648: alpha-1,4-galacturonosyltransferase
5 Sobic.003G013700 vacuolar ATP synthase subunit E, putative, expressed K02150: ATPeV1E, V-type H+-transporting ATPase subunit E
6 Sobic.008G104000 cyclin, putative, expressed K06627: cyclin-A
7 Sobic.005G050400 syntaxin 6, putative, expressed -
8 Sobic.004G241300 kinesin motor domain containing protein, putative, expressed K10395: kinesin family member 4
9 Sobic.007G014700 Fructokinase-2 (Zm)(PubMedID : 27208977)@kinase, pfkB family, putative, expressed K00847: E2.7.1.4, fructokinase
10 Sobic.008G156600 Leucine Rich Repeat family protein, expressed -
11 Sobic.005G138800 expressed protein -
12 Sobic.003G423700 endonuclease, putative, expressed K08991: crossover junction endonuclease MUS81
13 Sobic.002G087200 OsFBX231 - F-box domain containing protein, expressed -
14 Sobic.004G247500 "HD-zip transcription factor, ortholog of sihdz02 of foxtail millet (Setaria italica L.)"(PubMedID : 29862293)@caleosin related protein, putative, expressed K17991: peroxygenase
15 Sobic.001G230801 - -
16 Sobic.003G340000 expressed protein -
17 Sobic.001G400000 NAD dependent epimerase/dehydratase family protein, putative, expressed K12448: UXE, UDP-arabinose 4-epimerase
18 Sobic.001G435700 HVA22, putative, expressed K17338: receptor expression-enhancing protein 1/2/3/4
19 Sobic.010G182000 26S protease regulatory subunit, putative, expressed K03066: PSMC5, 26S proteasome regulatory subunit T6
20 Sobic.009G163100 kinesin motor domain containing protein, putative, expressed K10403: kinesin family member 22


Gene co-expression network
sample Sobic008G010600 Sobic008G010600 Sobic004G261800 Sobic004G261800 Sobic008G010600--Sobic004G261800 Sobic010G253200 Sobic010G253200 Sobic008G010600--Sobic010G253200 Sobic002G186200 Sobic002G186200 Sobic008G010600--Sobic002G186200 Sobic002G420100 Sobic002G420100 Sobic008G010600--Sobic002G420100 Sobic003G013700 Sobic003G013700 Sobic008G010600--Sobic003G013700 Sobic008G104000 Sobic008G104000 Sobic008G010600--Sobic008G104000 Sobic005G050400 Sobic005G050400 Sobic008G010600--Sobic005G050400 Sobic004G241300 Sobic004G241300 Sobic008G010600--Sobic004G241300 Sobic007G014700 Sobic007G014700 Sobic008G010600--Sobic007G014700 Sobic004G261800--Sobic003G013700 Sobic004G261800--Sobic002G186200 Sobic004G261800--Sobic007G014700 Sobic004G261800--Sobic010G253200 Sobic004G261800--Sobic002G420100 Sobic002G201700 Sobic002G201700 Sobic004G261800--Sobic002G201700 Sobic001G303900 Sobic001G303900 Sobic004G261800--Sobic001G303900 Sobic003G423700 Sobic003G423700 Sobic004G261800--Sobic003G423700 Sobic008G156600 Sobic008G156600 Sobic004G261800--Sobic008G156600 Sobic010G253200--Sobic002G420100 Sobic010G253200--Sobic004G241300 Sobic010G253200--Sobic003G423700 Sobic010G253200--Sobic008G104000 Sobic009G042000 Sobic009G042000 Sobic010G253200--Sobic009G042000 Sobic010G253200--Sobic002G186200 Sobic010G253200--Sobic004G261800 Sobic008G073500 Sobic008G073500 Sobic010G253200--Sobic008G073500 Sobic002G308000 Sobic002G308000 Sobic010G253200--Sobic002G308000 Sobic002G186200--Sobic004G261800 Sobic002G186200--Sobic003G423700 Sobic002G186200--Sobic010G253200 Sobic002G186200--Sobic002G420100 Sobic002G186200--Sobic004G241300 Sobic001G126800 Sobic001G126800 Sobic002G186200--Sobic001G126800 Sobic002G186200--Sobic008G156600 Sobic002G186200--Sobic003G013700 Sobic001G400000 Sobic001G400000 Sobic002G186200--Sobic001G400000 Sobic002G420100--Sobic010G253200 Sobic010G182000 Sobic010G182000 Sobic002G420100--Sobic010G182000 Sobic002G420100--Sobic004G241300 Sobic002G420100--Sobic003G423700 Sobic002G420100--Sobic008G156600 Sobic003G293400 Sobic003G293400 Sobic002G420100--Sobic003G293400 Sobic001G131900 Sobic001G131900 Sobic002G420100--Sobic001G131900 Sobic002G420100--Sobic001G400000 Sobic002G420100--Sobic008G104000 Sobic003G013700--Sobic004G261800 Sobic003G013700--Sobic005G050400 Sobic001G072000 Sobic001G072000 Sobic003G013700--Sobic001G072000 Sobic003G013700--Sobic008G156600 Sobic003G089100 Sobic003G089100 Sobic003G013700--Sobic003G089100 Sobic009G163100 Sobic009G163100 Sobic003G013700--Sobic009G163100 Sobic001G322400 Sobic001G322400 Sobic003G013700--Sobic001G322400 Sobic002G172401 Sobic002G172401 Sobic003G013700--Sobic002G172401 Sobic001G112600 Sobic001G112600 Sobic003G013700--Sobic001G112600 Sobic008G104000--Sobic003G423700 Sobic008G104000--Sobic004G241300 Sobic008G104000--Sobic010G253200 Sobic008G104000--Sobic010G182000 Sobic008G104000--Sobic002G420100 Sobic008G104000--Sobic001G126800 Sobic001G248400 Sobic001G248400 Sobic008G104000--Sobic001G248400 Sobic008G104000--Sobic008G156600 Sobic008G171900 Sobic008G171900 Sobic008G104000--Sobic008G171900 Sobic005G050400--Sobic001G112600 Sobic005G050400--Sobic001G072000 Sobic005G050400--Sobic008G156600 Sobic009G242200 Sobic009G242200 Sobic005G050400--Sobic009G242200 Sobic002G170100 Sobic002G170100 Sobic005G050400--Sobic002G170100 Sobic003G441000 Sobic003G441000 Sobic005G050400--Sobic003G441000 Sobic004G007400 Sobic004G007400 Sobic005G050400--Sobic004G007400 Sobic005G144000 Sobic005G144000 Sobic005G050400--Sobic005G144000 Sobic005G050400--Sobic009G163100 Sobic004G241300--Sobic008G171900 Sobic004G241300--Sobic008G156600 Sobic004G241300--Sobic009G163100 Sobic004G241300--Sobic003G423700 Sobic001G435700 Sobic001G435700 Sobic004G241300--Sobic001G435700 Sobic005G020600 Sobic005G020600 Sobic004G241300--Sobic005G020600 Sobic004G241300--Sobic002G420100 Sobic004G241300--Sobic010G253200 Sobic004G241300--Sobic002G172401 Sobic007G014700--Sobic004G261800 Sobic002G255400 Sobic002G255400 Sobic007G014700--Sobic002G255400 Sobic007G014700--Sobic003G089100 Sobic007G014700--Sobic003G013700 Sobic003G260600 Sobic003G260600 Sobic007G014700--Sobic003G260600 Sobic002G420600 Sobic002G420600 Sobic007G014700--Sobic002G420600 Sobic003G284100 Sobic003G284100 Sobic007G014700--Sobic003G284100 Sobic002G352200 Sobic002G352200 Sobic007G014700--Sobic002G352200 Sobic007G014700--Sobic001G303900
Octagon: transcription factors


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