Gene annotation
Transcriptome id Sobic.008G034000.2
Synonym Sb08g002930
Functional annotation avr9/Cf-9 rapidly elicited protein, putative, expressed
UniProt A0A1Z5R5Q7
Pfam PF05003
Panther DB PTHR31371 PTHR31371:SF7
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G51670 : Protein of unknown function (DUF668)
RAP-DB (Rice) LOC_Os12g05180.1 : avr9/Cf-9 rapidly elicited protein, putative, expressed
MaizeGDB (Corn) Zm00025a053863
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G239200 zinc finger, C3HC4 type domain containing protein, expressed K16285: RING/U-box domain-containing protein
2 Sobic.004G117600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@WRKY39, expressed -
3 Sobic.002G325100 expressed protein -
4 Sobic.002G290500 armadillo/beta-catenin repeat protein-related, putative, expressed -
5 Sobic.002G113500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./late senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@RALFL4 - Rapid ALkalinization Factor RALF family protein precursor, expressed -
6 Sobic.004G278400 DUF581 domain containing protein, expressed -
7 Sobic.002G040600 zinc finger, C3HC4 type domain containing protein, expressed K19043: E3 ubiquitin-protein ligase RHF
8 Sobic.002G419500 HAD superfamily phosphatase, putative, expressed -
9 Sobic.004G075100 - -
10 Sobic.009G170800 "Phylogenetic analysis of canonical DREB1 and DREB2 genes in sorghum with those genes in maize, rice, and Arabidopsis. "(PubMedID : 24086146)@Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
11 Sobic.001G508600 Up-reguralion under heat(PubMedID : 24916767)@-(PubMedID : 29751546)@zinc finger family protein, putative, expressed -
12 Sobic.010G225100 DUF640 domain containing protein, putative, expressed -
13 Sobic.005G005600 prenylated rab acceptor, putative, expressed -
14 Sobic.010G030900 glycosyltransferase, putative, expressed -
15 Sobic.002G338250 - -
16 Sobic.010G201388 - -
17 Sobic.003G364950 - -
18 Sobic.002G359300 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@ZOS7-07 - C2H2 zinc finger protein, expressed -
19 Sobic.004G056201 - -
20 Sobic.004G259600 slowmo homolog, putative, expressed -


Gene co-expression network
sample Sobic008G034000 Sobic008G034000 Sobic002G239200 Sobic002G239200 Sobic008G034000--Sobic002G239200 Sobic004G117600 Sobic004G117600 Sobic008G034000--Sobic004G117600 Sobic002G325100 Sobic002G325100 Sobic008G034000--Sobic002G325100 Sobic002G290500 Sobic002G290500 Sobic008G034000--Sobic002G290500 Sobic002G113500 Sobic002G113500 Sobic008G034000--Sobic002G113500 Sobic004G278400 Sobic004G278400 Sobic008G034000--Sobic004G278400 Sobic002G040600 Sobic002G040600 Sobic008G034000--Sobic002G040600 Sobic002G419500 Sobic002G419500 Sobic008G034000--Sobic002G419500 Sobic004G075100 Sobic004G075100 Sobic008G034000--Sobic004G075100 Sobic006G165100 Sobic006G165100 Sobic002G239200--Sobic006G165100 Sobic001G052300 Sobic001G052300 Sobic002G239200--Sobic001G052300 Sobic003G063200 Sobic003G063200 Sobic002G239200--Sobic003G063200 Sobic002G359300 Sobic002G359300 Sobic002G239200--Sobic002G359300 Sobic005G028700 Sobic005G028700 Sobic002G239200--Sobic005G028700 Sobic004G247200 Sobic004G247200 Sobic002G239200--Sobic004G247200 Sobic002G239200--Sobic004G117600 Sobic009G255500 Sobic009G255500 Sobic002G239200--Sobic009G255500 Sobic009G179500 Sobic009G179500 Sobic002G239200--Sobic009G179500 Sobic007G074200 Sobic007G074200 Sobic004G117600--Sobic007G074200 Sobic002G338250 Sobic002G338250 Sobic004G117600--Sobic002G338250 Sobic009G154200 Sobic009G154200 Sobic004G117600--Sobic009G154200 Sobic008G111500 Sobic008G111500 Sobic004G117600--Sobic008G111500 Sobic002G393600 Sobic002G393600 Sobic004G117600--Sobic002G393600 Sobic009G159400 Sobic009G159400 Sobic004G117600--Sobic009G159400 Sobic004G301300 Sobic004G301300 Sobic004G117600--Sobic004G301300 Sobic004G117600--Sobic002G239200 Sobic006G136800 Sobic006G136800 Sobic004G117600--Sobic006G136800 Sobic008G082200 Sobic008G082200 Sobic002G325100--Sobic008G082200 Sobic002G325100--Sobic002G290500 Sobic002G325100--Sobic002G419500 Sobic002G325100--Sobic002G338250 Sobic005G203100 Sobic005G203100 Sobic002G325100--Sobic005G203100 Sobic002G401566 Sobic002G401566 Sobic002G325100--Sobic002G401566 Sobic009G139700 Sobic009G139700 Sobic002G325100--Sobic009G139700 Sobic002G325100--Sobic008G034000 Sobic002G426700 Sobic002G426700 Sobic002G325100--Sobic002G426700 Sobic002G290500--Sobic004G117600 Sobic002G290500--Sobic002G419500 Sobic002G290500--Sobic008G111500 Sobic002G290500--Sobic008G082200 Sobic002G290500--Sobic002G338250 Sobic001G365100 Sobic001G365100 Sobic002G290500--Sobic001G365100 Sobic010G259500 Sobic010G259500 Sobic002G290500--Sobic010G259500 Sobic003G191500 Sobic003G191500 Sobic002G290500--Sobic003G191500 Sobic001G447100 Sobic001G447100 Sobic002G290500--Sobic001G447100 Sobic001G154400 Sobic001G154400 Sobic002G113500--Sobic001G154400 Sobic003G325700 Sobic003G325700 Sobic002G113500--Sobic003G325700 Sobic004G063500 Sobic004G063500 Sobic002G113500--Sobic004G063500 Sobic002G113500--Sobic002G239200 Sobic001G399300 Sobic001G399300 Sobic002G113500--Sobic001G399300 Sobic003G146400 Sobic003G146400 Sobic002G113500--Sobic003G146400 Sobic010G030900 Sobic010G030900 Sobic002G113500--Sobic010G030900 Sobic004G102900 Sobic004G102900 Sobic002G113500--Sobic004G102900 Sobic009G216800 Sobic009G216800 Sobic002G113500--Sobic009G216800 Sobic003G364950 Sobic003G364950 Sobic004G278400--Sobic003G364950 Sobic006G214600 Sobic006G214600 Sobic004G278400--Sobic006G214600 Sobic004G292001 Sobic004G292001 Sobic004G278400--Sobic004G292001 Sobic003G364000 Sobic003G364000 Sobic004G278400--Sobic003G364000 Sobic003G364300 Sobic003G364300 Sobic004G278400--Sobic003G364300 Sobic004G352301 Sobic004G352301 Sobic004G278400--Sobic004G352301 Sobic005G213500 Sobic005G213500 Sobic004G278400--Sobic005G213500 Sobic001G433900 Sobic001G433900 Sobic004G278400--Sobic001G433900 Sobic005G005600 Sobic005G005600 Sobic004G278400--Sobic005G005600 Sobic004G212300 Sobic004G212300 Sobic002G040600--Sobic004G212300 Sobic001G516600 Sobic001G516600 Sobic002G040600--Sobic001G516600 Sobic004G262500 Sobic004G262500 Sobic002G040600--Sobic004G262500 Sobic010G195500 Sobic010G195500 Sobic002G040600--Sobic010G195500 Sobic007G186100 Sobic007G186100 Sobic002G040600--Sobic007G186100 Sobic003G037800 Sobic003G037800 Sobic002G040600--Sobic003G037800 Sobic003G319500 Sobic003G319500 Sobic002G040600--Sobic003G319500 Sobic005G168800 Sobic005G168800 Sobic002G040600--Sobic005G168800 Sobic002G379200 Sobic002G379200 Sobic002G040600--Sobic002G379200 Sobic002G419500--Sobic002G290500 Sobic004G225800 Sobic004G225800 Sobic002G419500--Sobic004G225800 Sobic002G419500--Sobic007G074200 Sobic009G170800 Sobic009G170800 Sobic002G419500--Sobic009G170800 Sobic002G419500--Sobic004G102900 Sobic006G066600 Sobic006G066600 Sobic002G419500--Sobic006G066600 Sobic004G067900 Sobic004G067900 Sobic002G419500--Sobic004G067900 Sobic004G056201 Sobic004G056201 Sobic002G419500--Sobic004G056201 Sobic002G308400 Sobic002G308400 Sobic002G419500--Sobic002G308400 Sobic004G075100--Sobic003G191500 Sobic004G075100--Sobic002G338250 Sobic004G075100--Sobic009G216800 Sobic002G362000 Sobic002G362000 Sobic004G075100--Sobic002G362000 Sobic009G063900 Sobic009G063900 Sobic004G075100--Sobic009G063900 Sobic001G389900 Sobic001G389900 Sobic004G075100--Sobic001G389900 Sobic003G357100 Sobic003G357100 Sobic004G075100--Sobic003G357100 Sobic004G259600 Sobic004G259600 Sobic004G075100--Sobic004G259600 Sobic006G239300 Sobic006G239300 Sobic004G075100--Sobic006G239300
Octagon: transcription factors


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