Gene annotation
Transcriptome id Sobic.008G104300.1
Synonym Sb08g015610
Functional annotation OsFBX164 - F-box domain containing protein, expressed
UniProt C5YNY1
Pfam PF08268 PF00646
Panther DB PTHR10706 PTHR10706:SF128
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT5G07610 : F-box family protein
RAP-DB (Rice) LOC_Os05g08460.1 : OsFBX164 - F-box domain containing protein, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat TraesCS7B02G383500 , TraesCS5D02G187900 , TraesCS7D02G467900 , TraesCS7B02G383200 , TraesCS7A02G481200 , TraesCS7D02G468000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G036200 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, putative, expressed K11648: SMARCB1, SNF5, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
2 Sobic.010G235600 OsFBLD1 - F-box, LRR and FBD domain containing protein, expressed -
3 Sobic.008G021000 exostosin family domain containing protein, expressed -
4 Sobic.008G160500 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@tesmin/TSO1-like CXC domain containing protein, expressed -
5 Sobic.009G137700 hydrolase, NUDIX family, domain containing protein, expressed K01823: idi, isopentenyl-diphosphate Delta-isomerase
6 Sobic.002G019500 OsFBX234 - F-box domain containing protein, expressed -
7 Sobic.009G022100 Putative splicing factor(PubMedID : 24356560)@splicing factor, arginine/serine-rich 7, putative, expressed K12896: splicing factor, arginine/serine-rich 7
8 Sobic.006G224300 APO, putative, expressed -
9 Sobic.006G250100 tRNA-specific adenosine deaminase 1, putative, expressed K15440: TAD1, tRNA-specific adenosine deaminase 1
10 Sobic.006G120800 transglutaminase, putative, expressed -
11 Sobic.006G256300 leucyl-tRNA synthetase, cytoplasmic, putative, expressed K01869: LARS, leucyl-tRNA synthetase
12 Sobic.005G050600 protein of unknown function domain containing protein, expressed -
13 Sobic.002G276900 transcription initiation factor IIB, putative, expressed K03124: TFIIB, GTF2B, SUA7, transcription initiation factor TFIIB
14 Sobic.002G105000 OsFBD15 - F-box and FBD domain containing protein, expressed -
15 Sobic.001G310700 protein kinase family protein, putative, expressed K14500: BR-signaling kinase
16 Sobic.006G261100 UBX domain-containing protein, putative, expressed -
17 Sobic.001G215400 OsFBX387 - F-box domain containing protein, expressed -
18 Sobic.002G419000 AGC_AGC_other_RS6K_like.2 - ACG kinases include homologs to PKA, PKG and PKC, expressed K04688: ribosomal protein S6 kinase beta
19 Sobic.004G250900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@aldehyde dehydrogenase, putative, expressed K00128: aldehyde dehydrogenase (NAD+)
20 Sobic.002G059866 - -


Gene co-expression network
sample Sobic008G104300 Sobic008G104300 Sobic009G036200 Sobic009G036200 Sobic008G104300--Sobic009G036200 Sobic010G235600 Sobic010G235600 Sobic008G104300--Sobic010G235600 Sobic008G021000 Sobic008G021000 Sobic008G104300--Sobic008G021000 Sobic008G160500 Sobic008G160500 Sobic008G104300--Sobic008G160500 Sobic009G137700 Sobic009G137700 Sobic008G104300--Sobic009G137700 Sobic002G019500 Sobic002G019500 Sobic008G104300--Sobic002G019500 Sobic009G022100 Sobic009G022100 Sobic008G104300--Sobic009G022100 Sobic006G224300 Sobic006G224300 Sobic008G104300--Sobic006G224300 Sobic006G250100 Sobic006G250100 Sobic008G104300--Sobic006G250100 Sobic007G111100 Sobic007G111100 Sobic009G036200--Sobic007G111100 Sobic001G395100 Sobic001G395100 Sobic009G036200--Sobic001G395100 Sobic009G258400 Sobic009G258400 Sobic009G036200--Sobic009G258400 Sobic003G212900 Sobic003G212900 Sobic009G036200--Sobic003G212900 Sobic002G262700 Sobic002G262700 Sobic009G036200--Sobic002G262700 Sobic006G121300 Sobic006G121300 Sobic009G036200--Sobic006G121300 Sobic004G346100 Sobic004G346100 Sobic009G036200--Sobic004G346100 Sobic001G042200 Sobic001G042200 Sobic009G036200--Sobic001G042200 Sobic004G309900 Sobic004G309900 Sobic009G036200--Sobic004G309900 Sobic001G215400 Sobic001G215400 Sobic010G235600--Sobic001G215400 Sobic001G425000 Sobic001G425000 Sobic010G235600--Sobic001G425000 Sobic009G017200 Sobic009G017200 Sobic010G235600--Sobic009G017200 Sobic003G417900 Sobic003G417900 Sobic010G235600--Sobic003G417900 Sobic007G026000 Sobic007G026000 Sobic010G235600--Sobic007G026000 Sobic008G058800 Sobic008G058800 Sobic010G235600--Sobic008G058800 Sobic003G205501 Sobic003G205501 Sobic010G235600--Sobic003G205501 Sobic010G202600 Sobic010G202600 Sobic010G235600--Sobic010G202600 Sobic006G130200 Sobic006G130200 Sobic010G235600--Sobic006G130200 Sobic009G166600 Sobic009G166600 Sobic008G021000--Sobic009G166600 Sobic008G021000--Sobic006G224300 Sobic001G005600 Sobic001G005600 Sobic008G021000--Sobic001G005600 Sobic008G021000--Sobic003G212900 Sobic002G313900 Sobic002G313900 Sobic008G021000--Sobic002G313900 Sobic006G203300 Sobic006G203300 Sobic008G021000--Sobic006G203300 Sobic001G135500 Sobic001G135500 Sobic008G021000--Sobic001G135500 Sobic003G150900 Sobic003G150900 Sobic008G021000--Sobic003G150900 Sobic006G224800 Sobic006G224800 Sobic008G021000--Sobic006G224800 Sobic003G062400 Sobic003G062400 Sobic008G160500--Sobic003G062400 Sobic008G160500--Sobic001G005600 Sobic009G030400 Sobic009G030400 Sobic008G160500--Sobic009G030400 Sobic006G120800 Sobic006G120800 Sobic008G160500--Sobic006G120800 Sobic002G359900 Sobic002G359900 Sobic008G160500--Sobic002G359900 Sobic002G403200 Sobic002G403200 Sobic008G160500--Sobic002G403200 Sobic003G004500 Sobic003G004500 Sobic008G160500--Sobic003G004500 Sobic008G160500--Sobic009G258400 Sobic001G033400 Sobic001G033400 Sobic008G160500--Sobic001G033400 Sobic007G041300 Sobic007G041300 Sobic009G137700--Sobic007G041300 Sobic010G095700 Sobic010G095700 Sobic009G137700--Sobic010G095700 Sobic009G137700--Sobic007G111100 Sobic009G137700--Sobic009G258400 Sobic009G137700--Sobic002G262700 Sobic004G036300 Sobic004G036300 Sobic009G137700--Sobic004G036300 Sobic007G102700 Sobic007G102700 Sobic009G137700--Sobic007G102700 Sobic009G137700--Sobic009G036200 Sobic004G068500 Sobic004G068500 Sobic009G137700--Sobic004G068500 Sobic002G019750 Sobic002G019750 Sobic002G019500--Sobic002G019750 Sobic006G223800 Sobic006G223800 Sobic002G019500--Sobic006G223800 Sobic008G155600 Sobic008G155600 Sobic002G019500--Sobic008G155600 Sobic002G106000 Sobic002G106000 Sobic002G019500--Sobic002G106000 Sobic006G212500 Sobic006G212500 Sobic002G019500--Sobic006G212500 Sobic010G153000 Sobic010G153000 Sobic002G019500--Sobic010G153000 Sobic002G059866 Sobic002G059866 Sobic002G019500--Sobic002G059866 Sobic004G313300 Sobic004G313300 Sobic002G019500--Sobic004G313300 Sobic001G489150 Sobic001G489150 Sobic002G019500--Sobic001G489150 Sobic002G095700 Sobic002G095700 Sobic009G022100--Sobic002G095700 Sobic003G433500 Sobic003G433500 Sobic009G022100--Sobic003G433500 Sobic005G030300 Sobic005G030300 Sobic009G022100--Sobic005G030300 Sobic009G192500 Sobic009G192500 Sobic009G022100--Sobic009G192500 Sobic008G073000 Sobic008G073000 Sobic009G022100--Sobic008G073000 Sobic006G261100 Sobic006G261100 Sobic009G022100--Sobic006G261100 Sobic001G469800 Sobic001G469800 Sobic009G022100--Sobic001G469800 Sobic002G362300 Sobic002G362300 Sobic009G022100--Sobic002G362300 Sobic001G371000 Sobic001G371000 Sobic009G022100--Sobic001G371000 Sobic006G224300--Sobic008G021000 Sobic004G084500 Sobic004G084500 Sobic006G224300--Sobic004G084500 Sobic009G059400 Sobic009G059400 Sobic006G224300--Sobic009G059400 Sobic004G345400 Sobic004G345400 Sobic006G224300--Sobic004G345400 Sobic003G394200 Sobic003G394200 Sobic006G224300--Sobic003G394200 Sobic009G040800 Sobic009G040800 Sobic006G224300--Sobic009G040800 Sobic006G224300--Sobic009G017200 Sobic002G115500 Sobic002G115500 Sobic006G224300--Sobic002G115500 Sobic006G224300--Sobic006G203300 Sobic003G415100 Sobic003G415100 Sobic006G250100--Sobic003G415100 Sobic001G090300 Sobic001G090300 Sobic006G250100--Sobic001G090300 Sobic008G056200 Sobic008G056200 Sobic006G250100--Sobic008G056200 Sobic003G244700 Sobic003G244700 Sobic006G250100--Sobic003G244700 Sobic009G069200 Sobic009G069200 Sobic006G250100--Sobic009G069200 Sobic006G126600 Sobic006G126600 Sobic006G250100--Sobic006G126600 Sobic003G412100 Sobic003G412100 Sobic006G250100--Sobic003G412100 Sobic001G522400 Sobic001G522400 Sobic006G250100--Sobic001G522400 Sobic001G228400 Sobic001G228400 Sobic006G250100--Sobic001G228400
Octagon: transcription factors


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