Gene annotation
Transcriptome id Sobic.008G138500.3,Sobic.008G138500.2
Synonym Sb08g018930
Functional annotation expressed protein
UniProt C5YQA6
Pfam -
Panther DB PTHR35410 PTHR35410:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os12g38480.1 : expressed protein
MaizeGDB (Corn) Zm00025a004268
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.008G138500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G061100 expressed protein -
2 Sobic.006G083600 expressed protein K10134: etoposide-induced 2.4 mRNA
3 Sobic.006G237900 UBA/TS-N domain containing protein, expressed -
4 Sobic.010G072800 exportin-7-A, putative, expressed K18460: XPO7, exportin-7
5 Sobic.002G189400 AMP-binding enzyme, putative, expressed -
6 Sobic.010G130200 BPI/LBP family protein At3g20270 precursor, putative, expressed K05399: lipopolysaccharide-binding protein
7 Sobic.002G371300 peroxisome assembly protein, putative, expressed K13346: peroxin-10
8 Sobic.010G004100 expressed protein -
9 Sobic.002G137400 protein binding protein, putative, expressed -
10 Sobic.010G020300 spastin, putative, expressed K13254: spastin
11 Sobic.010G228500 rab geranylgeranyl transferase like protein, putative, expressed K14050: geranylgeranyl transferase type-2 subunit alpha
12 Sobic.008G186200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@lactate/malate dehydrogenase, putative, expressed K00026: malate dehydrogenase
13 Sobic.004G004200 expressed protein -
14 Sobic.006G271200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@cysteine protease ATG4, putative, expressed K08342: cysteine protease ATG4
15 Sobic.007G132100 myrosinase precursor, putative, expressed -
16 Sobic.004G039600 proteasome/cyclosome repeat containing protein, expressed K03028: PSMD2, 26S proteasome regulatory subunit N1
17 Sobic.007G205900 uvrB/uvrC motif family protein, expressed -
18 Sobic.001G281100 START domain containing protein, expressed -
19 Sobic.009G165400 lipin, N-terminal conserved region family protein, expressed K15728: phosphatidate phosphatase LPIN
20 Sobic.004G065000 expressed protein -


Gene co-expression network
sample Sobic008G138500 Sobic008G138500 Sobic008G061100 Sobic008G061100 Sobic008G138500--Sobic008G061100 Sobic006G083600 Sobic006G083600 Sobic008G138500--Sobic006G083600 Sobic006G237900 Sobic006G237900 Sobic008G138500--Sobic006G237900 Sobic010G072800 Sobic010G072800 Sobic008G138500--Sobic010G072800 Sobic002G189400 Sobic002G189400 Sobic008G138500--Sobic002G189400 Sobic010G130200 Sobic010G130200 Sobic008G138500--Sobic010G130200 Sobic002G371300 Sobic002G371300 Sobic008G138500--Sobic002G371300 Sobic010G004100 Sobic010G004100 Sobic008G138500--Sobic010G004100 Sobic002G137400 Sobic002G137400 Sobic008G138500--Sobic002G137400 Sobic001G279100 Sobic001G279100 Sobic008G061100--Sobic001G279100 Sobic010G129600 Sobic010G129600 Sobic008G061100--Sobic010G129600 Sobic003G304200 Sobic003G304200 Sobic008G061100--Sobic003G304200 Sobic008G061100--Sobic006G237900 Sobic006G271200 Sobic006G271200 Sobic008G061100--Sobic006G271200 Sobic001G298300 Sobic001G298300 Sobic008G061100--Sobic001G298300 Sobic008G186200 Sobic008G186200 Sobic008G061100--Sobic008G186200 Sobic006G115466 Sobic006G115466 Sobic008G061100--Sobic006G115466 Sobic001G436900 Sobic001G436900 Sobic008G061100--Sobic001G436900 Sobic006G083600--Sobic010G130200 Sobic003G305200 Sobic003G305200 Sobic006G083600--Sobic003G305200 Sobic006G083600--Sobic002G189400 Sobic010G264200 Sobic010G264200 Sobic006G083600--Sobic010G264200 Sobic007G024700 Sobic007G024700 Sobic006G083600--Sobic007G024700 Sobic003G155900 Sobic003G155900 Sobic006G083600--Sobic003G155900 Sobic002G262900 Sobic002G262900 Sobic006G083600--Sobic002G262900 Sobic001G124200 Sobic001G124200 Sobic006G083600--Sobic001G124200 Sobic004G113400 Sobic004G113400 Sobic006G083600--Sobic004G113400 Sobic006G237900--Sobic006G271200 Sobic004G351300 Sobic004G351300 Sobic006G237900--Sobic004G351300 Sobic001G003000 Sobic001G003000 Sobic006G237900--Sobic001G003000 Sobic005G059600 Sobic005G059600 Sobic006G237900--Sobic005G059600 Sobic006G237900--Sobic010G129600 Sobic006G237900--Sobic010G130200 Sobic010G043400 Sobic010G043400 Sobic006G237900--Sobic010G043400 Sobic001G089800 Sobic001G089800 Sobic006G237900--Sobic001G089800 Sobic006G237900--Sobic001G436900 Sobic001G375600 Sobic001G375600 Sobic010G072800--Sobic001G375600 Sobic010G072800--Sobic006G271200 Sobic002G430000 Sobic002G430000 Sobic010G072800--Sobic002G430000 Sobic001G207400 Sobic001G207400 Sobic010G072800--Sobic001G207400 Sobic004G209800 Sobic004G209800 Sobic010G072800--Sobic004G209800 Sobic003G089000 Sobic003G089000 Sobic010G072800--Sobic003G089000 Sobic007G060201 Sobic007G060201 Sobic010G072800--Sobic007G060201 Sobic006G204900 Sobic006G204900 Sobic010G072800--Sobic006G204900 Sobic004G269200 Sobic004G269200 Sobic010G072800--Sobic004G269200 Sobic010G228500 Sobic010G228500 Sobic002G189400--Sobic010G228500 Sobic004G339100 Sobic004G339100 Sobic002G189400--Sobic004G339100 Sobic002G189400--Sobic006G083600 Sobic009G148300 Sobic009G148300 Sobic002G189400--Sobic009G148300 Sobic007G202600 Sobic007G202600 Sobic002G189400--Sobic007G202600 Sobic002G189400--Sobic004G113400 Sobic004G127700 Sobic004G127700 Sobic002G189400--Sobic004G127700 Sobic008G099800 Sobic008G099800 Sobic002G189400--Sobic008G099800 Sobic002G111600 Sobic002G111600 Sobic002G189400--Sobic002G111600 Sobic010G130200--Sobic006G083600 Sobic001G111150 Sobic001G111150 Sobic010G130200--Sobic001G111150 Sobic010G130200--Sobic003G305200 Sobic010G130200--Sobic006G271200 Sobic002G270500 Sobic002G270500 Sobic010G130200--Sobic002G270500 Sobic010G130200--Sobic010G264200 Sobic003G354400 Sobic003G354400 Sobic010G130200--Sobic003G354400 Sobic010G130200--Sobic007G024700 Sobic005G203800 Sobic005G203800 Sobic010G130200--Sobic005G203800 Sobic001G273700 Sobic001G273700 Sobic002G371300--Sobic001G273700 Sobic007G132100 Sobic007G132100 Sobic002G371300--Sobic007G132100 Sobic005G172500 Sobic005G172500 Sobic002G371300--Sobic005G172500 Sobic003G118200 Sobic003G118200 Sobic002G371300--Sobic003G118200 Sobic004G353000 Sobic004G353000 Sobic002G371300--Sobic004G353000 Sobic004G178200 Sobic004G178200 Sobic002G371300--Sobic004G178200 Sobic010G118000 Sobic010G118000 Sobic002G371300--Sobic010G118000 Sobic007G218000 Sobic007G218000 Sobic002G371300--Sobic007G218000 Sobic002G371300--Sobic003G155900 Sobic007G163100 Sobic007G163100 Sobic010G004100--Sobic007G163100 Sobic001G117200 Sobic001G117200 Sobic010G004100--Sobic001G117200 Sobic010G004100--Sobic002G137400 Sobic003G337300 Sobic003G337300 Sobic010G004100--Sobic003G337300 Sobic003G104000 Sobic003G104000 Sobic010G004100--Sobic003G104000 Sobic010G004100--Sobic004G113400 Sobic003G408600 Sobic003G408600 Sobic010G004100--Sobic003G408600 Sobic004G004300 Sobic004G004300 Sobic010G004100--Sobic004G004300 Sobic001G415300 Sobic001G415300 Sobic010G004100--Sobic001G415300 Sobic002G137400--Sobic001G415300 Sobic004G002100 Sobic004G002100 Sobic002G137400--Sobic004G002100 Sobic002G137400--Sobic010G004100 Sobic002G137400--Sobic003G337300 Sobic003G331400 Sobic003G331400 Sobic002G137400--Sobic003G331400 Sobic001G281100 Sobic001G281100 Sobic002G137400--Sobic001G281100 Sobic002G137400--Sobic004G004300 Sobic001G534800 Sobic001G534800 Sobic002G137400--Sobic001G534800 Sobic002G031100 Sobic002G031100 Sobic002G137400--Sobic002G031100
Octagon: transcription factors


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