Gene annotation
Transcriptome id Sobic.008G139800.1
Synonym
Functional annotation asparagine synthase family protein, expressed
UniProt A0A1B6PDJ4
Pfam PF13537 PF00733
Panther DB PTHR11772 PTHR11772:SF3
NCBI CDD KOG0573; Asparagine synthase
KEGG Orthology -
Gene Ontology GO:0006529; asparagine biosynthetic process GO:0004066asparagine synthase (glutamine-hydrolyzing) activity


Orthologs (automatic annotation)
TAIR AT2G03667 : Asparagine synthase family protein
RAP-DB (Rice) LOC_Os12g38630.1 : asparagine synthase family protein, expressed
MaizeGDB (Corn) Zm00025a004292
Brachypodium KQJ86185
Barley HORVU5Hr1G020510.4 , HORVU5Hr1G020510.3 , HORVU5Hr1G020510.9 , HORVU5Hr1G020510.8 , HORVU5Hr1G020510.7 , HORVU5Hr1G020510.6 , HORVU5Hr1G020510.5 , HORVU5Hr1G020510.2 , HORVU5Hr1G020510.17 , HORVU5Hr1G020510.16 , HORVU5Hr1G020510.15 , HORVU5Hr1G020510.14 , HORVU5Hr1G020510.13 , HORVU5Hr1G020510.12 , HORVU5Hr1G020510.11 , HORVU5Hr1G020510.10 , HORVU5Hr1G020510.19 , HORVU5Hr1G020510.18 , HORVU5Hr1G020510.30 , HORVU5Hr1G020510.28 , HORVU5Hr1G020510.26 , HORVU5Hr1G020510.27 , HORVU5Hr1G020510.24 , HORVU5Hr1G020510.25 , HORVU5Hr1G020510.22 , HORVU5Hr1G020510.23 , HORVU5Hr1G020510.20 , HORVU5Hr1G020510.21
Wheat TraesCS5D02G090800 , TraesCS5D02G090800 , TraesCS5D02G090800 , TraesCS5B02G084600 , TraesCS5B02G084600 , TraesCS5A02G081800 , TraesCS5A02G081800 , TraesCS5A02G081800 , TraesCS5D02G090800
Populus -


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cDNA sequences
Sobic.008G139800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G190000 PPR repeat domain containing protein, putative, expressed -
2 Sobic.009G215500 transcription initiation factor IIB, putative, expressed K15196: BRF1, transcription factor IIIB 90 kDa subunit
3 Sobic.001G072500 expressed protein K12879: THO complex subunit 2
4 Sobic.001G530900 expressed protein -
5 Sobic.004G025800 phosphoribosyl transferase, putative, expressed K00948: PRPS, ribose-phosphate pyrophosphokinase
6 Sobic.005G142800 exportin 1, putative, expressed K15436: TRPO3, transportin-3
7 Sobic.004G134200 GTP binding protein, putative, expressed -
8 Sobic.001G172700 PPR repeat containing protein, expressed K17964: leucine-rich PPR motif-containing protein, mitochondrial
9 Sobic.001G145000 expressed protein K14376: poly(A) polymerase
10 Sobic.008G044100 expressed protein -
11 Sobic.003G101700 dnaJ domain containing protein, expressed -
12 Sobic.009G185700 mutS domain V family protein, expressed K08741: DNA mismatch repair protein MSH5
13 Sobic.003G391400 recA protein, putative, expressed K03553: recombination protein RecA
14 Sobic.010G125500 zinc finger, C3HC4 type domain containing protein, expressed K10601: SYVN1, E3 ubiquitin-protein ligase synoviolin
15 Sobic.002G316600 expressed protein -
16 Sobic.009G193500 AGAP007115-PA, putative, expressed -
17 Sobic.010G079500 PHD-finger domain containing protein, putative, expressed -
18 Sobic.004G334300 ATMAK10, putative, expressed -
19 Sobic.001G455600 cysteine synthase, putative, expressed K01738: cysteine synthase
20 Sobic.006G049900 MYB family transcription factor, putative, expressed K09522: DnaJ homolog subfamily C member 2


Gene co-expression network
sample Sobic008G139800 Sobic008G139800 Sobic003G190000 Sobic003G190000 Sobic008G139800--Sobic003G190000 Sobic009G215500 Sobic009G215500 Sobic008G139800--Sobic009G215500 Sobic001G072500 Sobic001G072500 Sobic008G139800--Sobic001G072500 Sobic001G530900 Sobic001G530900 Sobic008G139800--Sobic001G530900 Sobic004G025800 Sobic004G025800 Sobic008G139800--Sobic004G025800 Sobic005G142800 Sobic005G142800 Sobic008G139800--Sobic005G142800 Sobic004G134200 Sobic004G134200 Sobic008G139800--Sobic004G134200 Sobic001G172700 Sobic001G172700 Sobic008G139800--Sobic001G172700 Sobic001G145000 Sobic001G145000 Sobic008G139800--Sobic001G145000 Sobic001G060500 Sobic001G060500 Sobic003G190000--Sobic001G060500 Sobic002G073200 Sobic002G073200 Sobic003G190000--Sobic002G073200 Sobic002G173100 Sobic002G173100 Sobic003G190000--Sobic002G173100 Sobic010G197000 Sobic010G197000 Sobic003G190000--Sobic010G197000 Sobic003G203300 Sobic003G203300 Sobic003G190000--Sobic003G203300 Sobic009G014100 Sobic009G014100 Sobic003G190000--Sobic009G014100 Sobic005G075100 Sobic005G075100 Sobic003G190000--Sobic005G075100 Sobic003G190000--Sobic005G142800 Sobic001G219700 Sobic001G219700 Sobic003G190000--Sobic001G219700 Sobic009G215500--Sobic001G530900 Sobic008G044100 Sobic008G044100 Sobic009G215500--Sobic008G044100 Sobic009G215500--Sobic004G134200 Sobic003G155100 Sobic003G155100 Sobic009G215500--Sobic003G155100 Sobic006G031800 Sobic006G031800 Sobic009G215500--Sobic006G031800 Sobic006G219600 Sobic006G219600 Sobic009G215500--Sobic006G219600 Sobic001G133000 Sobic001G133000 Sobic009G215500--Sobic001G133000 Sobic001G465700 Sobic001G465700 Sobic009G215500--Sobic001G465700 Sobic006G050700 Sobic006G050700 Sobic009G215500--Sobic006G050700 Sobic002G169633 Sobic002G169633 Sobic001G072500--Sobic002G169633 Sobic003G401600 Sobic003G401600 Sobic001G072500--Sobic003G401600 Sobic004G263600 Sobic004G263600 Sobic001G072500--Sobic004G263600 Sobic004G209600 Sobic004G209600 Sobic001G072500--Sobic004G209600 Sobic002G316600 Sobic002G316600 Sobic001G072500--Sobic002G316600 Sobic004G314000 Sobic004G314000 Sobic001G072500--Sobic004G314000 Sobic006G131500 Sobic006G131500 Sobic001G072500--Sobic006G131500 Sobic010G206900 Sobic010G206900 Sobic001G072500--Sobic010G206900 Sobic010G139000 Sobic010G139000 Sobic001G072500--Sobic010G139000 Sobic010G002700 Sobic010G002700 Sobic001G530900--Sobic010G002700 Sobic001G530900--Sobic009G215500 Sobic001G378100 Sobic001G378100 Sobic001G530900--Sobic001G378100 Sobic007G185700 Sobic007G185700 Sobic001G530900--Sobic007G185700 Sobic005G118400 Sobic005G118400 Sobic001G530900--Sobic005G118400 Sobic005G084500 Sobic005G084500 Sobic001G530900--Sobic005G084500 Sobic003G332700 Sobic003G332700 Sobic001G530900--Sobic003G332700 Sobic001G530900--Sobic001G465700 Sobic003G217700 Sobic003G217700 Sobic001G530900--Sobic003G217700 Sobic003G391400 Sobic003G391400 Sobic004G025800--Sobic003G391400 Sobic007G075800 Sobic007G075800 Sobic004G025800--Sobic007G075800 Sobic003G033100 Sobic003G033100 Sobic004G025800--Sobic003G033100 Sobic004G030800 Sobic004G030800 Sobic004G025800--Sobic004G030800 Sobic010G051700 Sobic010G051700 Sobic004G025800--Sobic010G051700 Sobic004G025800--Sobic001G172700 Sobic003G101700 Sobic003G101700 Sobic004G025800--Sobic003G101700 Sobic002G418600 Sobic002G418600 Sobic004G025800--Sobic002G418600 Sobic004G025800--Sobic005G142800 Sobic006G119400 Sobic006G119400 Sobic005G142800--Sobic006G119400 Sobic001G298900 Sobic001G298900 Sobic005G142800--Sobic001G298900 Sobic001G124100 Sobic001G124100 Sobic005G142800--Sobic001G124100 Sobic005G142800--Sobic004G134200 Sobic008G172300 Sobic008G172300 Sobic005G142800--Sobic008G172300 Sobic002G345700 Sobic002G345700 Sobic005G142800--Sobic002G345700 Sobic005G142800--Sobic002G418600 Sobic010G079500 Sobic010G079500 Sobic005G142800--Sobic010G079500 Sobic007G111400 Sobic007G111400 Sobic005G142800--Sobic007G111400 Sobic004G134200--Sobic008G044100 Sobic001G374100 Sobic001G374100 Sobic004G134200--Sobic001G374100 Sobic009G256300 Sobic009G256300 Sobic004G134200--Sobic009G256300 Sobic010G010700 Sobic010G010700 Sobic004G134200--Sobic010G010700 Sobic004G134200--Sobic009G215500 Sobic001G194200 Sobic001G194200 Sobic004G134200--Sobic001G194200 Sobic004G276400 Sobic004G276400 Sobic004G134200--Sobic004G276400 Sobic003G011300 Sobic003G011300 Sobic004G134200--Sobic003G011300 Sobic004G134200--Sobic001G172700 Sobic001G172700--Sobic004G134200 Sobic001G172700--Sobic009G215500 Sobic001G172700--Sobic004G025800 Sobic006G137600 Sobic006G137600 Sobic001G172700--Sobic006G137600 Sobic003G434700 Sobic003G434700 Sobic001G172700--Sobic003G434700 Sobic010G053600 Sobic010G053600 Sobic001G172700--Sobic010G053600 Sobic001G172700--Sobic008G044100 Sobic001G172700--Sobic005G142800 Sobic001G172700--Sobic010G051700 Sobic002G424700 Sobic002G424700 Sobic001G145000--Sobic002G424700 Sobic004G334300 Sobic004G334300 Sobic001G145000--Sobic004G334300 Sobic002G275700 Sobic002G275700 Sobic001G145000--Sobic002G275700 Sobic004G244900 Sobic004G244900 Sobic001G145000--Sobic004G244900 Sobic001G145000--Sobic005G142800 Sobic007G103100 Sobic007G103100 Sobic001G145000--Sobic007G103100 Sobic001G527800 Sobic001G527800 Sobic001G145000--Sobic001G527800 Sobic010G123600 Sobic010G123600 Sobic001G145000--Sobic010G123600 Sobic001G145000--Sobic002G316600
Octagon: transcription factors


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