Gene annotation
Transcriptome id Sobic.009G032500.1
Synonym Sb09g002730
Functional annotation expressed protein
UniProt A0A1Z5R0N3
Pfam PF04181
Panther DB PTHR14732 PTHR14732:SF0
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G26760 : -
RAP-DB (Rice) LOC_Os05g04370.1 : expressed protein
MaizeGDB (Corn) Zm00025a038145 , Zm00025a055304
Brachypodium KQK07963
Barley HORVU1Hr1G016630.7 , HORVU1Hr1G016630.6 , HORVU1Hr1G016630.5 , HORVU1Hr1G016630.4 , HORVU1Hr1G016630.3 , HORVU1Hr1G016630.2 , HORVU1Hr1G016630.1 , HORVU1Hr1G016630.9 , HORVU1Hr1G016630.8
Wheat TraesCS1B02G095700 , TraesCS1B02G095700 , TraesCS1A02G077600 , TraesCS1D02G079700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G075900 SKP1, putative, expressed K03094: SKP1, S-phase kinase-associated protein 1
2 Sobic.008G179700 TATA-binding protein, putative, expressed K03120: TBP, transcription initiation factor TFIID TATA-box-binding protein
3 Sobic.009G179700 histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH1, putative, expressed K11420: [histone H3]-lysine9 N-trimethyltransferase EHMT
4 Sobic.002G350300 gamma response I protein, putative, expressed K13096: splicing factor 4
5 Sobic.001G392300 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16, putative, expressed K12820: DHX15, pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43
6 Sobic.002G126500 RNA recognition motif containing protein, expressed -
7 Sobic.003G401100 WW domain containing protein, expressed K12865: PQBP1, polyglutamine-binding protein 1
8 Sobic.008G112800 pre-mRNA-processing factor 6, putative, expressed K12855: PRPF6, pre-mRNA-processing factor 6
9 Sobic.006G204800 APO, putative, expressed -
10 Sobic.010G028300 bromodomain domain containing protein, expressed -
11 Sobic.010G236400 ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed K12847: USP39, U4/U6.U5 tri-snRNP-associated protein 2
12 Sobic.004G084300 MYB family transcription factor, putative, expressed K11324: DMAP1, SWC4, DNA methyltransferase 1-associated protein 1
13 Sobic.001G281600 cyclin-dependent kinase E-1, putative, expressed K02208: cyclin-dependent kinase 8/11
14 Sobic.010G219400 endonuclease V, putative, expressed -
15 Sobic.004G274200 ara54-like RING finger protein, putative, expressed K11971: RNF14, E3 ubiquitin-protein ligase RNF14
16 Sobic.007G078500 serine/threonine-protein kinase HT1, putative, expressed -
17 Sobic.008G131000 domain of unknown function family protein, expressed -
18 Sobic.001G010300 WD domain, G-beta repeat domain containing protein, expressed -
19 Sobic.009G095100 expressed protein -
20 Sobic.004G266900 AAA-type ATPase family protein, putative, expressed K17681: ATPase family AAA domain-containing protein 3A/B


Gene co-expression network
sample Sobic009G032500 Sobic009G032500 Sobic007G075900 Sobic007G075900 Sobic009G032500--Sobic007G075900 Sobic008G179700 Sobic008G179700 Sobic009G032500--Sobic008G179700 Sobic009G179700 Sobic009G179700 Sobic009G032500--Sobic009G179700 Sobic002G350300 Sobic002G350300 Sobic009G032500--Sobic002G350300 Sobic001G392300 Sobic001G392300 Sobic009G032500--Sobic001G392300 Sobic002G126500 Sobic002G126500 Sobic009G032500--Sobic002G126500 Sobic003G401100 Sobic003G401100 Sobic009G032500--Sobic003G401100 Sobic008G112800 Sobic008G112800 Sobic009G032500--Sobic008G112800 Sobic006G204800 Sobic006G204800 Sobic009G032500--Sobic006G204800 Sobic004G353200 Sobic004G353200 Sobic007G075900--Sobic004G353200 Sobic007G075900--Sobic001G392300 Sobic009G177500 Sobic009G177500 Sobic007G075900--Sobic009G177500 Sobic009G044800 Sobic009G044800 Sobic007G075900--Sobic009G044800 Sobic008G014500 Sobic008G014500 Sobic007G075900--Sobic008G014500 Sobic004G274200 Sobic004G274200 Sobic007G075900--Sobic004G274200 Sobic007G075900--Sobic003G401100 Sobic004G084300 Sobic004G084300 Sobic007G075900--Sobic004G084300 Sobic009G124700 Sobic009G124700 Sobic007G075900--Sobic009G124700 Sobic008G179700--Sobic002G350300 Sobic003G248200 Sobic003G248200 Sobic008G179700--Sobic003G248200 Sobic001G281600 Sobic001G281600 Sobic008G179700--Sobic001G281600 Sobic001G356600 Sobic001G356600 Sobic008G179700--Sobic001G356600 Sobic008G179700--Sobic009G179700 Sobic008G179700--Sobic004G084300 Sobic008G179700--Sobic003G401100 Sobic008G179700--Sobic002G126500 Sobic001G512700 Sobic001G512700 Sobic008G179700--Sobic001G512700 Sobic009G179700--Sobic002G350300 Sobic009G179700--Sobic001G356600 Sobic007G078600 Sobic007G078600 Sobic009G179700--Sobic007G078600 Sobic010G018700 Sobic010G018700 Sobic009G179700--Sobic010G018700 Sobic009G179700--Sobic008G179700 Sobic007G078500 Sobic007G078500 Sobic009G179700--Sobic007G078500 Sobic003G029100 Sobic003G029100 Sobic009G179700--Sobic003G029100 Sobic007G061000 Sobic007G061000 Sobic009G179700--Sobic007G061000 Sobic009G179700--Sobic001G512700 Sobic002G350300--Sobic008G179700 Sobic009G205200 Sobic009G205200 Sobic002G350300--Sobic009G205200 Sobic002G350300--Sobic009G179700 Sobic001G107500 Sobic001G107500 Sobic002G350300--Sobic001G107500 Sobic002G350300--Sobic001G512700 Sobic007G132400 Sobic007G132400 Sobic002G350300--Sobic007G132400 Sobic010G028300 Sobic010G028300 Sobic002G350300--Sobic010G028300 Sobic001G119300 Sobic001G119300 Sobic002G350300--Sobic001G119300 Sobic006G088100 Sobic006G088100 Sobic002G350300--Sobic006G088100 Sobic001G080700 Sobic001G080700 Sobic001G392300--Sobic001G080700 Sobic001G392300--Sobic007G061000 Sobic001G392300--Sobic009G177500 Sobic001G392300--Sobic004G353200 Sobic001G007000 Sobic001G007000 Sobic001G392300--Sobic001G007000 Sobic001G392300--Sobic007G075900 Sobic001G392300--Sobic009G044800 Sobic008G047800 Sobic008G047800 Sobic001G392300--Sobic008G047800 Sobic006G200600 Sobic006G200600 Sobic001G392300--Sobic006G200600 Sobic010G236400 Sobic010G236400 Sobic002G126500--Sobic010G236400 Sobic002G126500--Sobic003G029100 Sobic003G241200 Sobic003G241200 Sobic002G126500--Sobic003G241200 Sobic002G126500--Sobic004G084300 Sobic001G375700 Sobic001G375700 Sobic002G126500--Sobic001G375700 Sobic002G126500--Sobic008G179700 Sobic003G081000 Sobic003G081000 Sobic002G126500--Sobic003G081000 Sobic002G034600 Sobic002G034600 Sobic002G126500--Sobic002G034600 Sobic002G126500--Sobic008G112800 Sobic003G401100--Sobic010G236400 Sobic003G401100--Sobic004G084300 Sobic003G401100--Sobic001G281600 Sobic003G401100--Sobic003G081000 Sobic007G027700 Sobic007G027700 Sobic003G401100--Sobic007G027700 Sobic001G143500 Sobic001G143500 Sobic003G401100--Sobic001G143500 Sobic007G000800 Sobic007G000800 Sobic003G401100--Sobic007G000800 Sobic003G401100--Sobic004G274200 Sobic003G401100--Sobic003G241200 Sobic008G112800--Sobic004G274200 Sobic008G112800--Sobic010G236400 Sobic008G112800--Sobic001G392300 Sobic008G112800--Sobic002G126500 Sobic008G112800--Sobic009G044800 Sobic007G132100 Sobic007G132100 Sobic008G112800--Sobic007G132100 Sobic004G257100 Sobic004G257100 Sobic008G112800--Sobic004G257100 Sobic008G112800--Sobic008G179700 Sobic001G124200 Sobic001G124200 Sobic008G112800--Sobic001G124200 Sobic006G204800--Sobic010G236400 Sobic006G200700 Sobic006G200700 Sobic006G204800--Sobic006G200700 Sobic006G195700 Sobic006G195700 Sobic006G204800--Sobic006G195700 Sobic006G204800--Sobic001G392300 Sobic006G204800--Sobic007G075900 Sobic006G204800--Sobic008G112800 Sobic001G522600 Sobic001G522600 Sobic006G204800--Sobic001G522600 Sobic004G353000 Sobic004G353000 Sobic006G204800--Sobic004G353000 Sobic006G204800--Sobic004G084300
Octagon: transcription factors


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