Gene annotation
Transcriptome id Sobic.009G066400.4
Synonym Sb09g005540, MFP1
Functional annotation MAR-binding filament-like protein 1, putative, expressed
UniProt A0A1B6P781
Pfam -
Panther DB PTHR13140 PTHR13140:SF460
NCBI CDD KOG0963; Transcription factor/CCAAT displacement protein CDP1 KOG0978E3 ubiquitin ligase involved in syntaxin degradation
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G16000 : MAR binding filament-like protein 1
RAP-DB (Rice) LOC_Os05g08790.1 : MAR-binding filament-like protein 1, putative, expressed
MaizeGDB (Corn) Zm00025a043107
Brachypodium KQK07206
Barley HORVU1Hr1G026750.1
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G014800 RNA recognition motif containing protein, putative, expressed -
2 Sobic.009G142000 plus-3 domain containing protein, putative, expressed -
3 Sobic.005G143300 expressed protein -
4 Sobic.009G148200 deoxynucleoside kinase family, putative, expressed -
5 Sobic.001G367100 pleckstrin homology domain-containing protein, putative, expressed -
6 Sobic.001G453500 expressed protein -
7 Sobic.006G274100 ribosome biogenesis regulatory protein, putative, expressed K14852: regulator of ribosome biosynthesis
8 Sobic.001G245900 expressed protein -
9 Sobic.010G224700 - K17680: twinkle protein
10 Sobic.006G059500 expressed protein K13150: COIL, coilin
11 Sobic.002G380100 PPR repeat containing protein, expressed K17964: leucine-rich PPR motif-containing protein, mitochondrial
12 Sobic.008G017100 ubiquitin carboxyl-terminal hydrolase, family 1, putative, expressed -
13 Sobic.002G079100 histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH1, putative, expressed K11420: [histone H3]-lysine9 N-trimethyltransferase EHMT
14 Sobic.006G226300 SDA1, putative, expressed K14856: SDA1, protein SDA1
15 Sobic.010G215900 type II intron maturase protein, putative, expressed -
16 Sobic.005G078200 OsFBX400 - F-box domain containing protein, expressed -
17 Sobic.004G111000 bromodomain containing protein, expressed -
18 Sobic.008G101900 plastid division regulator MinE, putative, expressed -
19 Sobic.009G235200 ribosomal RNA large subunit methyltransferase J, putative, expressed K14857: SPB1, AdoMet-dependent rRNA methyltransferase SPB1
20 Sobic.010G050700 protein kinase, putative, expressed -


Gene co-expression network
sample Sobic009G066400 Sobic009G066400 Sobic007G014800 Sobic007G014800 Sobic009G066400--Sobic007G014800 Sobic009G142000 Sobic009G142000 Sobic009G066400--Sobic009G142000 Sobic005G143300 Sobic005G143300 Sobic009G066400--Sobic005G143300 Sobic009G148200 Sobic009G148200 Sobic009G066400--Sobic009G148200 Sobic001G367100 Sobic001G367100 Sobic009G066400--Sobic001G367100 Sobic001G453500 Sobic001G453500 Sobic009G066400--Sobic001G453500 Sobic006G274100 Sobic006G274100 Sobic009G066400--Sobic006G274100 Sobic001G245900 Sobic001G245900 Sobic009G066400--Sobic001G245900 Sobic010G224700 Sobic010G224700 Sobic009G066400--Sobic010G224700 Sobic003G123100 Sobic003G123100 Sobic007G014800--Sobic003G123100 Sobic007G014800--Sobic009G142000 Sobic004G086200 Sobic004G086200 Sobic007G014800--Sobic004G086200 Sobic002G112600 Sobic002G112600 Sobic007G014800--Sobic002G112600 Sobic001G346900 Sobic001G346900 Sobic007G014800--Sobic001G346900 Sobic004G285000 Sobic004G285000 Sobic007G014800--Sobic004G285000 Sobic004G215900 Sobic004G215900 Sobic007G014800--Sobic004G215900 Sobic006G226300 Sobic006G226300 Sobic007G014800--Sobic006G226300 Sobic008G163500 Sobic008G163500 Sobic007G014800--Sobic008G163500 Sobic003G294600 Sobic003G294600 Sobic009G142000--Sobic003G294600 Sobic001G451300 Sobic001G451300 Sobic009G142000--Sobic001G451300 Sobic004G085000 Sobic004G085000 Sobic009G142000--Sobic004G085000 Sobic007G029200 Sobic007G029200 Sobic009G142000--Sobic007G029200 Sobic001G453000 Sobic001G453000 Sobic009G142000--Sobic001G453000 Sobic009G142000--Sobic003G123100 Sobic008G132000 Sobic008G132000 Sobic009G142000--Sobic008G132000 Sobic005G200900 Sobic005G200900 Sobic009G142000--Sobic005G200900 Sobic001G536000 Sobic001G536000 Sobic009G142000--Sobic001G536000 Sobic005G143300--Sobic009G066400 Sobic002G060450 Sobic002G060450 Sobic005G143300--Sobic002G060450 Sobic005G143300--Sobic004G086200 Sobic006G210200 Sobic006G210200 Sobic005G143300--Sobic006G210200 Sobic005G110523 Sobic005G110523 Sobic005G143300--Sobic005G110523 Sobic002G380100 Sobic002G380100 Sobic005G143300--Sobic002G380100 Sobic002G050500 Sobic002G050500 Sobic005G143300--Sobic002G050500 Sobic003G185250 Sobic003G185250 Sobic005G143300--Sobic003G185250 Sobic004G239901 Sobic004G239901 Sobic005G143300--Sobic004G239901 Sobic006G067700 Sobic006G067700 Sobic009G148200--Sobic006G067700 Sobic003G104100 Sobic003G104100 Sobic009G148200--Sobic003G104100 Sobic010G050700 Sobic010G050700 Sobic009G148200--Sobic010G050700 Sobic004G199200 Sobic004G199200 Sobic009G148200--Sobic004G199200 Sobic010G277200 Sobic010G277200 Sobic009G148200--Sobic010G277200 Sobic009G148200--Sobic001G453500 Sobic002G216600 Sobic002G216600 Sobic009G148200--Sobic002G216600 Sobic009G148200--Sobic009G066400 Sobic001G368300 Sobic001G368300 Sobic009G148200--Sobic001G368300 Sobic010G279900 Sobic010G279900 Sobic001G367100--Sobic010G279900 Sobic001G315400 Sobic001G315400 Sobic001G367100--Sobic001G315400 Sobic001G367100--Sobic001G245900 Sobic003G023400 Sobic003G023400 Sobic001G367100--Sobic003G023400 Sobic008G080500 Sobic008G080500 Sobic001G367100--Sobic008G080500 Sobic009G151200 Sobic009G151200 Sobic001G367100--Sobic009G151200 Sobic004G128200 Sobic004G128200 Sobic001G367100--Sobic004G128200 Sobic002G079100 Sobic002G079100 Sobic001G367100--Sobic002G079100 Sobic003G077500 Sobic003G077500 Sobic001G367100--Sobic003G077500 Sobic006G111200 Sobic006G111200 Sobic001G453500--Sobic006G111200 Sobic001G453500--Sobic001G368300 Sobic004G151000 Sobic004G151000 Sobic001G453500--Sobic004G151000 Sobic006G140400 Sobic006G140400 Sobic001G453500--Sobic006G140400 Sobic004G027400 Sobic004G027400 Sobic001G453500--Sobic004G027400 Sobic004G027300 Sobic004G027300 Sobic001G453500--Sobic004G027300 Sobic001G049800 Sobic001G049800 Sobic001G453500--Sobic001G049800 Sobic001G453500--Sobic002G112600 Sobic009G105400 Sobic009G105400 Sobic001G453500--Sobic009G105400 Sobic008G101900 Sobic008G101900 Sobic006G274100--Sobic008G101900 Sobic006G274100--Sobic006G140400 Sobic010G032300 Sobic010G032300 Sobic006G274100--Sobic010G032300 Sobic006G274100--Sobic002G380100 Sobic004G354000 Sobic004G354000 Sobic006G274100--Sobic004G354000 Sobic004G119400 Sobic004G119400 Sobic006G274100--Sobic004G119400 Sobic006G274100--Sobic004G027400 Sobic003G259600 Sobic003G259600 Sobic006G274100--Sobic003G259600 Sobic006G274100--Sobic009G066400 Sobic001G245900--Sobic004G086200 Sobic001G245900--Sobic001G367100 Sobic001G245900--Sobic010G279900 Sobic001G245900--Sobic001G346900 Sobic008G057000 Sobic008G057000 Sobic001G245900--Sobic008G057000 Sobic003G409200 Sobic003G409200 Sobic001G245900--Sobic003G409200 Sobic001G134300 Sobic001G134300 Sobic001G245900--Sobic001G134300 Sobic001G088900 Sobic001G088900 Sobic001G245900--Sobic001G088900 Sobic006G138000 Sobic006G138000 Sobic001G245900--Sobic006G138000 Sobic002G378100 Sobic002G378100 Sobic010G224700--Sobic002G378100 Sobic008G017100 Sobic008G017100 Sobic010G224700--Sobic008G017100 Sobic010G224700--Sobic004G027300 Sobic001G119600 Sobic001G119600 Sobic010G224700--Sobic001G119600 Sobic003G123200 Sobic003G123200 Sobic010G224700--Sobic003G123200 Sobic010G224700--Sobic008G163500 Sobic010G224700--Sobic001G049800 Sobic003G425100 Sobic003G425100 Sobic010G224700--Sobic003G425100 Sobic003G199300 Sobic003G199300 Sobic010G224700--Sobic003G199300
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.