Gene annotation
Transcriptome id Sobic.009G084100.1,Sobic.009G084100.2
Synonym ATRAC7, ROP9, ARAC7, ATROP9, RAC7, Sb09g007420
Functional annotation ras-related protein, putative, expressed
UniProt A0A1B6P795 , C5YV52
Pfam PF08477
Panther DB PTHR24072 PTHR24072:SF154
NCBI CDD KOG0393; Ras-related small GTPase, Rho type
KEGG Orthology K04392; Ras-related C3 botulinum toxin substrate 1
Gene Ontology GO:0007264; small GTPase mediated signal transduction GO:0005525GTP binding


Orthologs (automatic annotation)
TAIR AT4G28950 : RHO-related protein from plants 9
RAP-DB (Rice) LOC_Os05g43820.1,LOC_Os05g43820.3 : ras-related protein, putative, expressed
MaizeGDB (Corn) Zm00025a043181
Brachypodium -
Barley HORVU3Hr1G052560.2 , HORVU3Hr1G052560.1 , HORVU3Hr1G052560.3 , HORVU3Hr1G052560.5 , HORVU3Hr1G052560.4 , HORVU3Hr1G052560.7 , HORVU3Hr1G052560.6
Wheat TraesCS3D02G161900 , TraesCS3A02G154600 , TraesCS3B02G180900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G247800 peroxidase precursor, putative, expressed K00430: peroxidase
2 Sobic.002G286100 DUF292 domain containing protein, expressed -
3 Sobic.006G196600 expressed protein -
4 Sobic.009G109300 POLA4 - Putative DNA polymerase alpha complex subunit, expressed K02684: DNA primase small subunit
5 Sobic.001G295400 protein kinase domain containing protein, expressed K02214: cell division control protein 7
6 Sobic.001G104500 growth-regulating factor, putative, expressed -
7 Sobic.004G108400 heavy-metal-associated domain-containing protein, putative, expressed -
8 Sobic.007G112100 enoyl-acyl-carrier-protein reductase NADH, chloroplast precursor, expressed K00208: enoyl-[acyl-carrier protein] reductase I
9 Sobic.007G187700 retinoblastoma-related protein-like, putative, expressed K04681: retinoblastoma-like protein 1
10 Sobic.006G275500 regulator of chromosome condensation, putative, expressed -
11 Sobic.006G051000 POLA3 - Putative DNA polymerase alpha complex subunit, expressed K02685: DNA primase large subunit
12 Sobic.002G230800 expressed protein -
13 Sobic.006G195500 DNA-binding protein, putative, expressed K10742: DNA replication ATP-dependent helicase Dna2
14 Sobic.009G146250 - -
15 Sobic.002G286700 lysM domain-containing GPI-anchored protein precursor, putative, expressed -
16 Sobic.005G157300 protein binding protein, putative, expressed -
17 Sobic.007G218100 transmembrane receptor, putative, expressed -
18 Sobic.003G183700 MCM4 - Putative minichromosome maintenance MCM complex subunit 4, expressed K02212: MCM4, DNA replication licensing factor MCM4
19 Sobic.007G008300 WD domain, G-beta repeat domain containing protein, expressed K10751: chromatin assembly factor 1 subunit B
20 Sobic.010G103700 POLA2 - Putative DNA polymerase alpha complex subunit, expressed K02321: DNA polymerase alpha subunit B


Gene co-expression network
sample Sobic009G084100 Sobic009G084100 Sobic006G247800 Sobic006G247800 Sobic009G084100--Sobic006G247800 Sobic002G286100 Sobic002G286100 Sobic009G084100--Sobic002G286100 Sobic006G196600 Sobic006G196600 Sobic009G084100--Sobic006G196600 Sobic009G109300 Sobic009G109300 Sobic009G084100--Sobic009G109300 Sobic001G295400 Sobic001G295400 Sobic009G084100--Sobic001G295400 Sobic001G104500 Sobic001G104500 Sobic009G084100--Sobic001G104500 Sobic004G108400 Sobic004G108400 Sobic009G084100--Sobic004G108400 Sobic007G112100 Sobic007G112100 Sobic009G084100--Sobic007G112100 Sobic007G187700 Sobic007G187700 Sobic009G084100--Sobic007G187700 Sobic004G311600 Sobic004G311600 Sobic006G247800--Sobic004G311600 Sobic006G247800--Sobic009G084100 Sobic002G256900 Sobic002G256900 Sobic006G247800--Sobic002G256900 Sobic002G232900 Sobic002G232900 Sobic006G247800--Sobic002G232900 Sobic002G230900 Sobic002G230900 Sobic006G247800--Sobic002G230900 Sobic007G097100 Sobic007G097100 Sobic006G247800--Sobic007G097100 Sobic001G336200 Sobic001G336200 Sobic006G247800--Sobic001G336200 Sobic004G207766 Sobic004G207766 Sobic006G247800--Sobic004G207766 Sobic003G350400 Sobic003G350400 Sobic006G247800--Sobic003G350400 Sobic002G286100--Sobic004G108400 Sobic002G286100--Sobic009G084100 Sobic003G320300 Sobic003G320300 Sobic002G286100--Sobic003G320300 Sobic005G157300 Sobic005G157300 Sobic002G286100--Sobic005G157300 Sobic002G286100--Sobic001G295400 Sobic009G225500 Sobic009G225500 Sobic002G286100--Sobic009G225500 Sobic001G452900 Sobic001G452900 Sobic002G286100--Sobic001G452900 Sobic007G008300 Sobic007G008300 Sobic002G286100--Sobic007G008300 Sobic009G172950 Sobic009G172950 Sobic002G286100--Sobic009G172950 Sobic006G051000 Sobic006G051000 Sobic006G196600--Sobic006G051000 Sobic003G183700 Sobic003G183700 Sobic006G196600--Sobic003G183700 Sobic006G195500 Sobic006G195500 Sobic006G196600--Sobic006G195500 Sobic004G317000 Sobic004G317000 Sobic006G196600--Sobic004G317000 Sobic001G377700 Sobic001G377700 Sobic006G196600--Sobic001G377700 Sobic006G196600--Sobic007G187700 Sobic006G275500 Sobic006G275500 Sobic006G196600--Sobic006G275500 Sobic006G196600--Sobic005G157300 Sobic010G103700 Sobic010G103700 Sobic006G196600--Sobic010G103700 Sobic009G109300--Sobic007G112100 Sobic009G109300--Sobic006G051000 Sobic009G109300--Sobic010G103700 Sobic009G109300--Sobic006G195500 Sobic001G238900 Sobic001G238900 Sobic009G109300--Sobic001G238900 Sobic002G230800 Sobic002G230800 Sobic009G109300--Sobic002G230800 Sobic009G109300--Sobic003G183700 Sobic003G179500 Sobic003G179500 Sobic009G109300--Sobic003G179500 Sobic002G246900 Sobic002G246900 Sobic009G109300--Sobic002G246900 Sobic001G295400--Sobic007G008300 Sobic001G295400--Sobic001G377700 Sobic005G110535 Sobic005G110535 Sobic001G295400--Sobic005G110535 Sobic001G295400--Sobic004G108400 Sobic002G290000 Sobic002G290000 Sobic001G295400--Sobic002G290000 Sobic001G295400--Sobic003G183700 Sobic002G420000 Sobic002G420000 Sobic001G295400--Sobic002G420000 Sobic001G295400--Sobic003G320300 Sobic001G295400--Sobic006G195500 Sobic004G282601 Sobic004G282601 Sobic001G104500--Sobic004G282601 Sobic001G104500--Sobic006G275500 Sobic001G104500--Sobic007G187700 Sobic001G104500--Sobic004G317000 Sobic001G104500--Sobic002G256900 Sobic002G168000 Sobic002G168000 Sobic001G104500--Sobic002G168000 Sobic002G055800 Sobic002G055800 Sobic001G104500--Sobic002G055800 Sobic006G016700 Sobic006G016700 Sobic001G104500--Sobic006G016700 Sobic010G037901 Sobic010G037901 Sobic001G104500--Sobic010G037901 Sobic001G054700 Sobic001G054700 Sobic004G108400--Sobic001G054700 Sobic006G221300 Sobic006G221300 Sobic004G108400--Sobic006G221300 Sobic009G143200 Sobic009G143200 Sobic004G108400--Sobic009G143200 Sobic004G108400--Sobic001G452900 Sobic004G108400--Sobic007G008300 Sobic009G127800 Sobic009G127800 Sobic004G108400--Sobic009G127800 Sobic007G162400 Sobic007G162400 Sobic004G108400--Sobic007G162400 Sobic002G050700 Sobic002G050700 Sobic004G108400--Sobic002G050700 Sobic009G101100 Sobic009G101100 Sobic004G108400--Sobic009G101100 Sobic007G112100--Sobic009G109300 Sobic001G532800 Sobic001G532800 Sobic007G112100--Sobic001G532800 Sobic004G032900 Sobic004G032900 Sobic007G112100--Sobic004G032900 Sobic002G158500 Sobic002G158500 Sobic007G112100--Sobic002G158500 Sobic002G236700 Sobic002G236700 Sobic007G112100--Sobic002G236700 Sobic006G120600 Sobic006G120600 Sobic007G112100--Sobic006G120600 Sobic001G140700 Sobic001G140700 Sobic007G112100--Sobic001G140700 Sobic002G304400 Sobic002G304400 Sobic007G112100--Sobic002G304400 Sobic007G079600 Sobic007G079600 Sobic007G112100--Sobic007G079600 Sobic007G187700--Sobic002G168000 Sobic002G021200 Sobic002G021200 Sobic007G187700--Sobic002G021200 Sobic005G153000 Sobic005G153000 Sobic007G187700--Sobic005G153000 Sobic007G187700--Sobic001G104500 Sobic007G187700--Sobic001G377700 Sobic007G187700--Sobic006G275500 Sobic007G187700--Sobic004G317000 Sobic007G187700--Sobic004G282601 Sobic009G077300 Sobic009G077300 Sobic007G187700--Sobic009G077300
Octagon: transcription factors


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