Gene annotation
Transcriptome id Sobic.009G152700.2,Sobic.009G152700.1
Synonym Sb09g021620
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence (PubMedID : 27586543)
fructose-1,6-bisphosphatase, putative, expressed
UniProt A0A1B6P8N4 , A0A1B6P8P1
Pfam PF00316
Panther DB PTHR11556 PTHR11556:SF17
NCBI CDD KOG1458; Fructose-1,6-bisphosphatase
KEGG Orthology K03841; FBP, fructose-1,6-bisphosphatase I
Gene Ontology GO:0005975; carbohydrate metabolic process


Orthologs (automatic annotation)
TAIR AT1G43670 : Inositol monophosphatase family protein
RAP-DB (Rice) LOC_Os05g36270.1 : fructose-1,6-bisphosphatase, putative, expressed
MaizeGDB (Corn) Zm00025a038740 , Zm00025a037293 , Zm00025a026717
Brachypodium KQK06045 , KQK10761 , KQK06044
Barley HORVU1Hr1G074330.14 , HORVU1Hr1G074330.15 , HORVU1Hr1G074330.16 , HORVU1Hr1G074330.17 , HORVU1Hr1G074330.12 , HORVU1Hr1G074330.13 , HORVU3Hr1G083350.13 , HORVU3Hr1G083350.16 , HORVU3Hr1G083350.17 , HORVU3Hr1G083350.15 , HORVU1Hr1G074330.6 , HORVU1Hr1G074330.7 , HORVU1Hr1G074330.5 , HORVU1Hr1G074330.2 , HORVU1Hr1G074330.3 , HORVU1Hr1G074330.1 , HORVU1Hr1G074330.8 , HORVU1Hr1G074330.9
Wheat TraesCS5D02G017900 , TraesCS1B02G283600 , TraesCS1A02G273900 , TraesCS1D02G274000 , TraesCS3B02G410400 , TraesCS3D02G370700 , TraesCS3A02G377600 , TraesCS1D02G274200 , TraesCS1D02G274200
Populus -


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cDNA sequences
Sobic.009G152700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G401200 selenium-binding protein, putative, expressed K17285: methanethiol oxidase
2 Sobic.001G447500 aminotransferase domain containing protein, putative, expressed K00826: E2.6.1.42, branched-chain amino acid aminotransferase
3 Sobic.003G366400 uricase, putative, expressed K00365: urate oxidase
4 Sobic.008G062200 dehydrogenase E1 component domain containing protein, expressed K00166: BCKDHA, 2-oxoisovalerate dehydrogenase E1 component alpha subunit
5 Sobic.006G214500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@lecithine cholesterol acyltransferase, putative, expressed -
6 Sobic.009G126900 mitochondrial carrier protein, putative, expressed -
7 Sobic.004G042300 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
8 Sobic.003G329400 dihydropyrimidinase, putative, expressed K01464: DPYS, dht, dihydropyrimidinase
9 Sobic.002G132000 serine/threonine-protein kinase AFC2, putative, expressed K08287: dual-specificity kinase
10 Sobic.006G052100 nodulin, putative, expressed -
11 Sobic.002G009700 AMP-binding domain containing protein, expressed -
12 Sobic.004G264400 TBC domain containing protein, expressed -
13 Sobic.001G443900 peptide transporter PTR2, putative, expressed -
14 Sobic.004G295800 chaperone protein dnaJ, putative, expressed K09503: DnaJ homolog subfamily A member 2
15 Sobic.004G331100 WD domain and HEAT domain containing protein, putative, expressed K08333: PIK3R4, phosphoinositide-3-kinase, regulatory subunit 4
16 Sobic.003G408500 beclin-1, putative, expressed K08334: BECN, VPS30, beclin
17 Sobic.009G041700 Fibronectin type III domain containing protein, expressed -
18 Sobic.001G159700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@transporter family protein, putative, expressed -
19 Sobic.001G224600 peroxisome assembly protein 12, putative, expressed K13345: PEX12, peroxin-12
20 Sobic.006G147700 L-allo-threonine aldolase, putative, expressed K01620: threonine aldolase


Gene co-expression network
sample Sobic009G152700 Sobic009G152700 Sobic003G401200 Sobic003G401200 Sobic009G152700--Sobic003G401200 Sobic001G447500 Sobic001G447500 Sobic009G152700--Sobic001G447500 Sobic003G366400 Sobic003G366400 Sobic009G152700--Sobic003G366400 Sobic008G062200 Sobic008G062200 Sobic009G152700--Sobic008G062200 Sobic006G214500 Sobic006G214500 Sobic009G152700--Sobic006G214500 Sobic009G126900 Sobic009G126900 Sobic009G152700--Sobic009G126900 Sobic004G042300 Sobic004G042300 Sobic009G152700--Sobic004G042300 Sobic003G329400 Sobic003G329400 Sobic009G152700--Sobic003G329400 Sobic002G132000 Sobic002G132000 Sobic009G152700--Sobic002G132000 Sobic003G401200--Sobic003G366400 Sobic004G169700 Sobic004G169700 Sobic003G401200--Sobic004G169700 Sobic003G401200--Sobic009G152700 Sobic003G401200--Sobic008G062200 Sobic003G219600 Sobic003G219600 Sobic003G401200--Sobic003G219600 Sobic001G227800 Sobic001G227800 Sobic003G401200--Sobic001G227800 Sobic009G211400 Sobic009G211400 Sobic003G401200--Sobic009G211400 Sobic003G401200--Sobic003G329400 Sobic002G215700 Sobic002G215700 Sobic003G401200--Sobic002G215700 Sobic001G156100 Sobic001G156100 Sobic001G447500--Sobic001G156100 Sobic001G447500--Sobic006G214500 Sobic001G447500--Sobic003G329400 Sobic003G148800 Sobic003G148800 Sobic001G447500--Sobic003G148800 Sobic001G447500--Sobic008G062200 Sobic007G219900 Sobic007G219900 Sobic001G447500--Sobic007G219900 Sobic003G407300 Sobic003G407300 Sobic001G447500--Sobic003G407300 Sobic009G121100 Sobic009G121100 Sobic001G447500--Sobic009G121100 Sobic001G443900 Sobic001G443900 Sobic001G447500--Sobic001G443900 Sobic003G366400--Sobic007G219900 Sobic003G366400--Sobic003G401200 Sobic003G366400--Sobic002G215700 Sobic004G260000 Sobic004G260000 Sobic003G366400--Sobic004G260000 Sobic003G366400--Sobic001G227800 Sobic004G246200 Sobic004G246200 Sobic003G366400--Sobic004G246200 Sobic005G018500 Sobic005G018500 Sobic003G366400--Sobic005G018500 Sobic004G101900 Sobic004G101900 Sobic003G366400--Sobic004G101900 Sobic003G366400--Sobic009G211400 Sobic003G355600 Sobic003G355600 Sobic008G062200--Sobic003G355600 Sobic009G226300 Sobic009G226300 Sobic008G062200--Sobic009G226300 Sobic002G304000 Sobic002G304000 Sobic008G062200--Sobic002G304000 Sobic009G054500 Sobic009G054500 Sobic008G062200--Sobic009G054500 Sobic008G062200--Sobic004G260000 Sobic001G325200 Sobic001G325200 Sobic008G062200--Sobic001G325200 Sobic008G062200--Sobic004G101900 Sobic009G193700 Sobic009G193700 Sobic008G062200--Sobic009G193700 Sobic008G062200--Sobic003G148800 Sobic006G214500--Sobic009G121100 Sobic006G214500--Sobic001G443900 Sobic003G408500 Sobic003G408500 Sobic006G214500--Sobic003G408500 Sobic008G160700 Sobic008G160700 Sobic006G214500--Sobic008G160700 Sobic010G078100 Sobic010G078100 Sobic006G214500--Sobic010G078100 Sobic006G214500--Sobic001G156100 Sobic006G214500--Sobic003G407300 Sobic006G214500--Sobic001G447500 Sobic009G249200 Sobic009G249200 Sobic006G214500--Sobic009G249200 Sobic010G043400 Sobic010G043400 Sobic009G126900--Sobic010G043400 Sobic002G270500 Sobic002G270500 Sobic009G126900--Sobic002G270500 Sobic002G009700 Sobic002G009700 Sobic009G126900--Sobic002G009700 Sobic006G271200 Sobic006G271200 Sobic009G126900--Sobic006G271200 Sobic001G003000 Sobic001G003000 Sobic009G126900--Sobic001G003000 Sobic004G124200 Sobic004G124200 Sobic009G126900--Sobic004G124200 Sobic003G005600 Sobic003G005600 Sobic009G126900--Sobic003G005600 Sobic009G126900--Sobic003G329400 Sobic009G126900--Sobic004G101900 Sobic006G052100 Sobic006G052100 Sobic004G042300--Sobic006G052100 Sobic004G042300--Sobic009G193700 Sobic004G042300--Sobic008G062200 Sobic004G102400 Sobic004G102400 Sobic004G042300--Sobic004G102400 Sobic003G320700 Sobic003G320700 Sobic004G042300--Sobic003G320700 Sobic004G042300--Sobic003G329400 Sobic004G042300--Sobic002G132000 Sobic001G089800 Sobic001G089800 Sobic004G042300--Sobic001G089800 Sobic001G290000 Sobic001G290000 Sobic004G042300--Sobic001G290000 Sobic001G322700 Sobic001G322700 Sobic003G329400--Sobic001G322700 Sobic003G329400--Sobic008G062200 Sobic003G329400--Sobic001G325200 Sobic010G107000 Sobic010G107000 Sobic003G329400--Sobic010G107000 Sobic003G329400--Sobic002G304000 Sobic007G068100 Sobic007G068100 Sobic003G329400--Sobic007G068100 Sobic003G329400--Sobic009G226300 Sobic003G329400--Sobic003G148800 Sobic003G354400 Sobic003G354400 Sobic003G329400--Sobic003G354400 Sobic004G006200 Sobic004G006200 Sobic002G132000--Sobic004G006200 Sobic004G264400 Sobic004G264400 Sobic002G132000--Sobic004G264400 Sobic007G024700 Sobic007G024700 Sobic002G132000--Sobic007G024700 Sobic004G295800 Sobic004G295800 Sobic002G132000--Sobic004G295800 Sobic001G109800 Sobic001G109800 Sobic002G132000--Sobic001G109800 Sobic002G132000--Sobic001G290000 Sobic009G113000 Sobic009G113000 Sobic002G132000--Sobic009G113000 Sobic003G305200 Sobic003G305200 Sobic002G132000--Sobic003G305200 Sobic001G137100 Sobic001G137100 Sobic002G132000--Sobic001G137100
Octagon: transcription factors


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