Gene annotation
Transcriptome id Sobic.009G181100.1
Synonym Sb09g024130
Functional annotation translation initiation factor IF-2, putative, expressed
UniProt C5Z093
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G15320 : -
RAP-DB (Rice) LOC_Os09g02770.2 : translation initiation factor IF-2, putative, expressed
MaizeGDB (Corn) Zm00025a044079
Brachypodium KQJ86919
Barley HORVU5Hr1G050670.5 , HORVU5Hr1G050670.4 , HORVU5Hr1G050670.3 , HORVU5Hr1G050670.2
Wheat TraesCS5B02G159700 , TraesCS5D02G166700 , TraesCS5A02G162200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G215800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
2 Sobic.002G039100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@glutaredoxin, putative, expressed K17479: glutaredoxin domain-containing cysteine-rich protein 1
3 Sobic.010G001800 DNA-binding protein-related, putative, expressed K07466: RFA1, RPA1, replication factor A1
4 Sobic.001G440900 LSM domain containing protein, expressed K11088: SNRPD3, small nuclear ribonucleoprotein D3
5 Sobic.001G439100 thaumatin-like protein 1 precursor, putative, expressed -
6 Sobic.001G429000 harpin-induced protein 1 domain containing protein, expressed -
7 Sobic.001G505000 cyclin-dependent kinases regulatory subunit 1, putative, expressed K02219: cyclin-dependent kinase regulatory subunit CKS1
8 Sobic.001G117500 AT hook-containing DNA-binding protein, putative, expressed -
9 Sobic.009G157600 DUF740 domain containing protein, expressed -
10 Sobic.003G279100 mitochondrial ATP synthase g subunit family protein, putative, expressed K02140: ATPeFG, ATP5L, F-type H+-transporting ATPase subunit g
11 Sobic.006G031900 expansin precursor, putative, expressed -
12 Sobic.010G222100 MBTB10 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
13 Sobic.006G138900 expressed protein -
14 Sobic.003G383100 STE_MEK_ste7_MAP2K.3 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed -
15 Sobic.003G109200 expressed protein -
16 Sobic.001G052200 protein kinase domain containing protein, expressed -
17 Sobic.001G399300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@protein phosphotase protein, putative, expressed -
18 Sobic.010G094800 pro-resilin precursor, putative, expressed -
19 Sobic.007G051300 dnaJ domain containing protein, expressed K09510: DnaJ homolog subfamily B member 4
20 Sobic.003G107200 SNF7 domain containing protein, putative, expressed K12198: CHMP5, charged multivesicular body protein 5


Gene co-expression network
sample Sobic009G181100 Sobic009G181100 Sobic010G215800 Sobic010G215800 Sobic009G181100--Sobic010G215800 Sobic002G039100 Sobic002G039100 Sobic009G181100--Sobic002G039100 Sobic010G001800 Sobic010G001800 Sobic009G181100--Sobic010G001800 Sobic001G440900 Sobic001G440900 Sobic009G181100--Sobic001G440900 Sobic001G439100 Sobic001G439100 Sobic009G181100--Sobic001G439100 Sobic001G429000 Sobic001G429000 Sobic009G181100--Sobic001G429000 Sobic001G505000 Sobic001G505000 Sobic009G181100--Sobic001G505000 Sobic001G117500 Sobic001G117500 Sobic009G181100--Sobic001G117500 Sobic009G157600 Sobic009G157600 Sobic009G181100--Sobic009G157600 Sobic010G222100 Sobic010G222100 Sobic010G215800--Sobic010G222100 Sobic002G289800 Sobic002G289800 Sobic010G215800--Sobic002G289800 Sobic010G239400 Sobic010G239400 Sobic010G215800--Sobic010G239400 Sobic010G215800--Sobic001G439100 Sobic010G215800--Sobic002G039100 Sobic003G279100 Sobic003G279100 Sobic010G215800--Sobic003G279100 Sobic005G129700 Sobic005G129700 Sobic010G215800--Sobic005G129700 Sobic009G033800 Sobic009G033800 Sobic010G215800--Sobic009G033800 Sobic010G215800--Sobic001G505000 Sobic002G039100--Sobic010G215800 Sobic002G039100--Sobic001G505000 Sobic006G013900 Sobic006G013900 Sobic002G039100--Sobic006G013900 Sobic009G165500 Sobic009G165500 Sobic002G039100--Sobic009G165500 Sobic002G039100--Sobic010G222100 Sobic002G039100--Sobic003G279100 Sobic006G149200 Sobic006G149200 Sobic002G039100--Sobic006G149200 Sobic003G383100 Sobic003G383100 Sobic002G039100--Sobic003G383100 Sobic001G399300 Sobic001G399300 Sobic002G039100--Sobic001G399300 Sobic010G001800--Sobic001G440900 Sobic007G108100 Sobic007G108100 Sobic010G001800--Sobic007G108100 Sobic002G241500 Sobic002G241500 Sobic010G001800--Sobic002G241500 Sobic010G159100 Sobic010G159100 Sobic010G001800--Sobic010G159100 Sobic010G001800--Sobic001G505000 Sobic008G008300 Sobic008G008300 Sobic010G001800--Sobic008G008300 Sobic008G093200 Sobic008G093200 Sobic010G001800--Sobic008G093200 Sobic001G108400 Sobic001G108400 Sobic010G001800--Sobic001G108400 Sobic009G001200 Sobic009G001200 Sobic010G001800--Sobic009G001200 Sobic002G351100 Sobic002G351100 Sobic001G440900--Sobic002G351100 Sobic001G300400 Sobic001G300400 Sobic001G440900--Sobic001G300400 Sobic001G440900--Sobic010G001800 Sobic001G289900 Sobic001G289900 Sobic001G440900--Sobic001G289900 Sobic004G327600 Sobic004G327600 Sobic001G440900--Sobic004G327600 Sobic001G235700 Sobic001G235700 Sobic001G440900--Sobic001G235700 Sobic001G107300 Sobic001G107300 Sobic001G440900--Sobic001G107300 Sobic001G440900--Sobic002G289800 Sobic007G153700 Sobic007G153700 Sobic001G440900--Sobic007G153700 Sobic003G174700 Sobic003G174700 Sobic001G439100--Sobic003G174700 Sobic001G439100--Sobic010G215800 Sobic001G439100--Sobic010G222100 Sobic002G247800 Sobic002G247800 Sobic001G439100--Sobic002G247800 Sobic001G439100--Sobic003G279100 Sobic010G163732 Sobic010G163732 Sobic001G439100--Sobic010G163732 Sobic004G217450 Sobic004G217450 Sobic001G439100--Sobic004G217450 Sobic001G439100--Sobic002G039100 Sobic003G379600 Sobic003G379600 Sobic001G439100--Sobic003G379600 Sobic001G429500 Sobic001G429500 Sobic001G429000--Sobic001G429500 Sobic001G429000--Sobic001G399300 Sobic001G429000--Sobic009G165500 Sobic001G429000--Sobic009G157600 Sobic006G200000 Sobic006G200000 Sobic001G429000--Sobic006G200000 Sobic001G429000--Sobic001G505000 Sobic001G261549 Sobic001G261549 Sobic001G429000--Sobic001G261549 Sobic003G423000 Sobic003G423000 Sobic001G429000--Sobic003G423000 Sobic009G194900 Sobic009G194900 Sobic001G429000--Sobic009G194900 Sobic001G505000--Sobic009G165500 Sobic001G505000--Sobic001G107300 Sobic001G505000--Sobic006G149200 Sobic001G505000--Sobic002G289800 Sobic001G505000--Sobic010G222100 Sobic006G115000 Sobic006G115000 Sobic001G505000--Sobic006G115000 Sobic001G505000--Sobic006G013900 Sobic001G505000--Sobic001G429000 Sobic001G505000--Sobic003G174700 Sobic001G061101 Sobic001G061101 Sobic001G117500--Sobic001G061101 Sobic004G352900 Sobic004G352900 Sobic001G117500--Sobic004G352900 Sobic004G341100 Sobic004G341100 Sobic001G117500--Sobic004G341100 Sobic002G373001 Sobic002G373001 Sobic001G117500--Sobic002G373001 Sobic009G065300 Sobic009G065300 Sobic001G117500--Sobic009G065300 Sobic010G066300 Sobic010G066300 Sobic001G117500--Sobic010G066300 Sobic002G254650 Sobic002G254650 Sobic001G117500--Sobic002G254650 Sobic003G150000 Sobic003G150000 Sobic001G117500--Sobic003G150000 Sobic004G311300 Sobic004G311300 Sobic001G117500--Sobic004G311300 Sobic010G227200 Sobic010G227200 Sobic009G157600--Sobic010G227200 Sobic004G047100 Sobic004G047100 Sobic009G157600--Sobic004G047100 Sobic002G230800 Sobic002G230800 Sobic009G157600--Sobic002G230800 Sobic003G107200 Sobic003G107200 Sobic009G157600--Sobic003G107200 Sobic006G138900 Sobic006G138900 Sobic009G157600--Sobic006G138900 Sobic006G081800 Sobic006G081800 Sobic009G157600--Sobic006G081800 Sobic001G255600 Sobic001G255600 Sobic009G157600--Sobic001G255600 Sobic001G091500 Sobic001G091500 Sobic009G157600--Sobic001G091500 Sobic009G120700 Sobic009G120700 Sobic009G157600--Sobic009G120700
Octagon: transcription factors


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