Gene annotation
Transcriptome id Sobic.009G200500.1,Sobic.009G200500.2
Synonym Sb09g025810, HAT3.1
Functional annotation Homeobox domain containing protein, expressed
UniProt A0A1B6P9P1
Pfam PF00046 PF00628
Panther DB PTHR12628 PTHR12628:SF13
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0003677; DNA binding GO:0005515protein binding


Orthologs (automatic annotation)
TAIR AT3G19510 : Homeodomain-like protein with RING/FYVE/PHD-type zinc finger domain
RAP-DB (Rice) LOC_Os06g12400.1 : Homeobox domain containing protein, expressed
MaizeGDB (Corn) Zm00025a044337 , Zm00025a044342 , Zm00025a037959 , Zm00025a056937
Brachypodium PNT70902 , PNT70905 , KQK05353 , PNT70903 , KQK05356 , KQK05354 , KQK05355 , PNT70907 , PNT70900 , PNT70906 , PNT70901 , PNT70908 , PNT70909 , PNT70913 , PNT70912 , PNT70911 , PNT70910 , PNT70904 , PNT70898 , PNT70899
Barley HORVU3Hr1G071350.1 , HORVU3Hr1G071350.2 , HORVU3Hr1G071350.5 , HORVU3Hr1G071350.4 , HORVU3Hr1G071350.7 , HORVU3Hr1G071350.6 , HORVU3Hr1G071350.9 , HORVU3Hr1G071350.8 , HORVU3Hr1G071350.10
Wheat TraesCS1B02G351300 , TraesCS1B02G351300 , TraesCS1B02G351300 , TraesCS1A02G338900 , TraesCS1A02G338900 , TraesCS1D02G341000 , TraesCS1D02G341000 , TraesCS1D02G341000 , TraesCS1D02G341000 , TraesCS1D02G341000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G354600 SAP domain containing protein, expressed K12875: ACIN1, apoptotic chromatin condensation inducer in the nucleus
2 Sobic.003G144300 expressed protein -
3 Sobic.010G254900 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed K14321: NUPL2, NUP42, nucleoporin-like protein 2
4 Sobic.002G295500 expressed protein -
5 Sobic.001G382600 expressed protein -
6 Sobic.009G003700 PINHEAD, putative, expressed K11593: ELF2C, eukaryotic translation initiation factor 2C
7 Sobic.007G225100 ZOS8-09 - C2H2 zinc finger protein, expressed -
8 Sobic.001G065100 cullin, putative, expressed K10609: cullin 4
9 Sobic.009G255600 cleavage and polyadenylation specificity factor, putative, expressed K10610: DNA damage-binding protein 1
10 Sobic.006G240100 BRCA1-associated protein, putative, expressed K10632: BRCA1-associated protein
11 Sobic.006G131000 expressed protein K11968: ariadne-1
12 Sobic.006G200700 elongation factor Tu, putative, expressed K14416: elongation factor 1 alpha-like protein
13 Sobic.002G137200 ZOS9-21 - C2H2 zinc finger protein, expressed -
14 Sobic.003G284000 CAMK_KIN1/SNF1/Nim1_like_AMPKh.3 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K07198: PRKAA, 5'-AMP-activated protein kinase, catalytic alpha subunit
15 Sobic.003G379200 wound-responsive family protein, putative, expressed -
16 Sobic.001G118200 CASP, putative, expressed K09313: homeobox protein cut-like
17 Sobic.001G163400 roothairless 1, putative, expressed -
18 Sobic.006G261400 peptidase, trypsin-like serine and cysteine proteases, putative, expressed -
19 Sobic.003G416700 homeobox domain containing protein, expressed -
20 Sobic.003G360400 ulp1 protease family protein, putative, expressed K08596: sentrin-specific protease 7


Gene co-expression network
sample Sobic009G200500 Sobic009G200500 Sobic001G354600 Sobic001G354600 Sobic009G200500--Sobic001G354600 Sobic003G144300 Sobic003G144300 Sobic009G200500--Sobic003G144300 Sobic010G254900 Sobic010G254900 Sobic009G200500--Sobic010G254900 Sobic002G295500 Sobic002G295500 Sobic009G200500--Sobic002G295500 Sobic001G382600 Sobic001G382600 Sobic009G200500--Sobic001G382600 Sobic009G003700 Sobic009G003700 Sobic009G200500--Sobic009G003700 Sobic007G225100 Sobic007G225100 Sobic009G200500--Sobic007G225100 Sobic001G065100 Sobic001G065100 Sobic009G200500--Sobic001G065100 Sobic009G255600 Sobic009G255600 Sobic009G200500--Sobic009G255600 Sobic003G360400 Sobic003G360400 Sobic001G354600--Sobic003G360400 Sobic010G112100 Sobic010G112100 Sobic001G354600--Sobic010G112100 Sobic001G433800 Sobic001G433800 Sobic001G354600--Sobic001G433800 Sobic004G048800 Sobic004G048800 Sobic001G354600--Sobic004G048800 Sobic007G105100 Sobic007G105100 Sobic001G354600--Sobic007G105100 Sobic002G133300 Sobic002G133300 Sobic001G354600--Sobic002G133300 Sobic001G063700 Sobic001G063700 Sobic001G354600--Sobic001G063700 Sobic002G068100 Sobic002G068100 Sobic001G354600--Sobic002G068100 Sobic009G044800 Sobic009G044800 Sobic001G354600--Sobic009G044800 Sobic004G256500 Sobic004G256500 Sobic003G144300--Sobic004G256500 Sobic003G294600 Sobic003G294600 Sobic003G144300--Sobic003G294600 Sobic002G327000 Sobic002G327000 Sobic003G144300--Sobic002G327000 Sobic002G179400 Sobic002G179400 Sobic003G144300--Sobic002G179400 Sobic007G168300 Sobic007G168300 Sobic003G144300--Sobic007G168300 Sobic008G124800 Sobic008G124800 Sobic003G144300--Sobic008G124800 Sobic007G019300 Sobic007G019300 Sobic003G144300--Sobic007G019300 Sobic004G085000 Sobic004G085000 Sobic003G144300--Sobic004G085000 Sobic001G453000 Sobic001G453000 Sobic003G144300--Sobic001G453000 Sobic003G212900 Sobic003G212900 Sobic010G254900--Sobic003G212900 Sobic002G422100 Sobic002G422100 Sobic010G254900--Sobic002G422100 Sobic006G281700 Sobic006G281700 Sobic010G254900--Sobic006G281700 Sobic007G218000 Sobic007G218000 Sobic010G254900--Sobic007G218000 Sobic001G308400 Sobic001G308400 Sobic010G254900--Sobic001G308400 Sobic003G180900 Sobic003G180900 Sobic010G254900--Sobic003G180900 Sobic010G204400 Sobic010G204400 Sobic010G254900--Sobic010G204400 Sobic001G091400 Sobic001G091400 Sobic010G254900--Sobic001G091400 Sobic001G452000 Sobic001G452000 Sobic010G254900--Sobic001G452000 Sobic003G104000 Sobic003G104000 Sobic002G295500--Sobic003G104000 Sobic002G295500--Sobic009G044800 Sobic003G416700 Sobic003G416700 Sobic002G295500--Sobic003G416700 Sobic006G224800 Sobic006G224800 Sobic002G295500--Sobic006G224800 Sobic004G353000 Sobic004G353000 Sobic002G295500--Sobic004G353000 Sobic007G183900 Sobic007G183900 Sobic002G295500--Sobic007G183900 Sobic006G240100 Sobic006G240100 Sobic002G295500--Sobic006G240100 Sobic007G132100 Sobic007G132100 Sobic002G295500--Sobic007G132100 Sobic006G200700 Sobic006G200700 Sobic002G295500--Sobic006G200700 Sobic002G299000 Sobic002G299000 Sobic001G382600--Sobic002G299000 Sobic002G008800 Sobic002G008800 Sobic001G382600--Sobic002G008800 Sobic001G382600--Sobic001G065100 Sobic001G118200 Sobic001G118200 Sobic001G382600--Sobic001G118200 Sobic002G111600 Sobic002G111600 Sobic001G382600--Sobic002G111600 Sobic003G337300 Sobic003G337300 Sobic001G382600--Sobic003G337300 Sobic002G020700 Sobic002G020700 Sobic001G382600--Sobic002G020700 Sobic008G055900 Sobic008G055900 Sobic001G382600--Sobic008G055900 Sobic006G131000 Sobic006G131000 Sobic001G382600--Sobic006G131000 Sobic007G145400 Sobic007G145400 Sobic009G003700--Sobic007G145400 Sobic003G050900 Sobic003G050900 Sobic009G003700--Sobic003G050900 Sobic001G248100 Sobic001G248100 Sobic009G003700--Sobic001G248100 Sobic001G097500 Sobic001G097500 Sobic009G003700--Sobic001G097500 Sobic009G003700--Sobic001G118200 Sobic005G110499 Sobic005G110499 Sobic009G003700--Sobic005G110499 Sobic004G053500 Sobic004G053500 Sobic009G003700--Sobic004G053500 Sobic004G147500 Sobic004G147500 Sobic009G003700--Sobic004G147500 Sobic002G340900 Sobic002G340900 Sobic009G003700--Sobic002G340900 Sobic004G277200 Sobic004G277200 Sobic007G225100--Sobic004G277200 Sobic001G313700 Sobic001G313700 Sobic007G225100--Sobic001G313700 Sobic007G225100--Sobic002G299000 Sobic007G225100--Sobic003G337300 Sobic002G366400 Sobic002G366400 Sobic007G225100--Sobic002G366400 Sobic007G225100--Sobic003G104000 Sobic008G099800 Sobic008G099800 Sobic007G225100--Sobic008G099800 Sobic001G124200 Sobic001G124200 Sobic007G225100--Sobic001G124200 Sobic002G045600 Sobic002G045600 Sobic007G225100--Sobic002G045600 Sobic002G042600 Sobic002G042600 Sobic001G065100--Sobic002G042600 Sobic001G065100--Sobic002G179400 Sobic001G263600 Sobic001G263600 Sobic001G065100--Sobic001G263600 Sobic002G401500 Sobic002G401500 Sobic001G065100--Sobic002G401500 Sobic001G493700 Sobic001G493700 Sobic001G065100--Sobic001G493700 Sobic008G088872 Sobic008G088872 Sobic001G065100--Sobic008G088872 Sobic004G322400 Sobic004G322400 Sobic001G065100--Sobic004G322400 Sobic005G062200 Sobic005G062200 Sobic001G065100--Sobic005G062200 Sobic003G296900 Sobic003G296900 Sobic001G065100--Sobic003G296900 Sobic010G186600 Sobic010G186600 Sobic009G255600--Sobic010G186600 Sobic009G255600--Sobic003G416700 Sobic003G214600 Sobic003G214600 Sobic009G255600--Sobic003G214600 Sobic005G200800 Sobic005G200800 Sobic009G255600--Sobic005G200800 Sobic009G119000 Sobic009G119000 Sobic009G255600--Sobic009G119000 Sobic002G029100 Sobic002G029100 Sobic009G255600--Sobic002G029100 Sobic003G042400 Sobic003G042400 Sobic009G255600--Sobic003G042400 Sobic001G291800 Sobic001G291800 Sobic009G255600--Sobic001G291800 Sobic009G255600--Sobic003G360400
Octagon: transcription factors


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