Gene annotation
Transcriptome id Sobic.010G007500.1
Synonym PYR6
Functional annotation adenylate kinase, putative, expressed
UniProt A0A194YGM5
Pfam PF13238
Panther DB PTHR23359 PTHR23359:SF103
NCBI CDD KOG3079; Uridylate kinase/adenylate kinase
KEGG Orthology K13800; CMPK1, UMP-CMP kinase
Gene Ontology GO:0006139; nucleobase-containing compound metabolic process GO:0005524ATP binding


Orthologs (automatic annotation)
TAIR AT5G26667 : P-loop containing nucleoside triphosphate hydrolases superfamily protein
RAP-DB (Rice) LOC_Os06g02000.3 : adenylate kinase, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G113100 "OsSPMS1(Ortholog in rice:Tao et al., 2018)"(PubMedID : 31659881)@spermidine synthase, putative, expressed K00797: speE, SRM, spermidine synthase
2 Sobic.005G004500 ferritin-1, chloroplast precursor, putative, expressed K00522: ferritin heavy chain
3 Sobic.001G167900 oxidoreductase, aldo/keto reductase family protein, putative, expressed -
4 Sobic.004G125800 tocopherol cyclase, chloroplast precursor, putative, expressed K09834: VTE1, tocopherol cyclase
5 Sobic.009G241100 expressed protein -
6 Sobic.004G154800 expressed protein -
7 Sobic.002G072400 zeta-carotene desaturase, chloroplast/chromoplast precursor, putative, expressed K00514: ZDS, zeta-carotene desaturase
8 Sobic.002G230600 glucose-6-phosphate isomerase, putative, expressed K01810: GPI, glucose-6-phosphate isomerase
9 Sobic.002G200900 alpha/beta hydrolase fold, putative, expressed -
10 Sobic.004G124400 uncharacterized conserved membrane protein specific to cyanobacteria, putative, expressed -
11 Sobic.005G062700 nifU, putative, expressed -
12 Sobic.006G261700 DJ-1 family protein, putative, expressed K18881: D-lactate dehydratase
13 Sobic.001G220000 PPR repeat containing protein, expressed -
14 Sobic.004G028300 expressed protein -
15 Sobic.004G275000 heat shock protein DnaJ, putative, expressed -
16 Sobic.001G436400 immature colon carcinoma transcript 1 protein precursor, putative, expressed K15033: peptidyl-tRNA hydrolase ICT1
17 Sobic.004G317700 tRNA synthetase class I, putative, expressed K01870: IARS, isoleucyl-tRNA synthetase
18 Sobic.003G058700 5-azacytidine resistance protein azr1, putative, expressed -
19 Sobic.003G103300 1-deoxy-D-xylulose 5-phosphate reductoisomerase, chloroplast precursor, putative, expressed K00099: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
20 Sobic.004G305900 heat shock protein DnaJ, putative, expressed -


Gene co-expression network
sample Sobic010G007500 Sobic010G007500 Sobic004G113100 Sobic004G113100 Sobic010G007500--Sobic004G113100 Sobic005G004500 Sobic005G004500 Sobic010G007500--Sobic005G004500 Sobic001G167900 Sobic001G167900 Sobic010G007500--Sobic001G167900 Sobic004G125800 Sobic004G125800 Sobic010G007500--Sobic004G125800 Sobic009G241100 Sobic009G241100 Sobic010G007500--Sobic009G241100 Sobic004G154800 Sobic004G154800 Sobic010G007500--Sobic004G154800 Sobic002G072400 Sobic002G072400 Sobic010G007500--Sobic002G072400 Sobic002G230600 Sobic002G230600 Sobic010G007500--Sobic002G230600 Sobic002G200900 Sobic002G200900 Sobic010G007500--Sobic002G200900 Sobic003G103300 Sobic003G103300 Sobic004G113100--Sobic003G103300 Sobic004G113100--Sobic004G125800 Sobic001G015200 Sobic001G015200 Sobic004G113100--Sobic001G015200 Sobic007G046950 Sobic007G046950 Sobic004G113100--Sobic007G046950 Sobic010G101000 Sobic010G101000 Sobic004G113100--Sobic010G101000 Sobic009G225600 Sobic009G225600 Sobic004G113100--Sobic009G225600 Sobic005G062700 Sobic005G062700 Sobic004G113100--Sobic005G062700 Sobic002G030900 Sobic002G030900 Sobic004G113100--Sobic002G030900 Sobic001G104700 Sobic001G104700 Sobic004G113100--Sobic001G104700 Sobic005G004500--Sobic002G200900 Sobic006G108200 Sobic006G108200 Sobic005G004500--Sobic006G108200 Sobic005G004500--Sobic004G154800 Sobic004G055000 Sobic004G055000 Sobic005G004500--Sobic004G055000 Sobic001G352200 Sobic001G352200 Sobic005G004500--Sobic001G352200 Sobic005G134100 Sobic005G134100 Sobic005G004500--Sobic005G134100 Sobic004G028300 Sobic004G028300 Sobic005G004500--Sobic004G028300 Sobic005G004500--Sobic001G167900 Sobic002G351600 Sobic002G351600 Sobic005G004500--Sobic002G351600 Sobic001G167900--Sobic004G028300 Sobic004G124400 Sobic004G124400 Sobic001G167900--Sobic004G124400 Sobic004G359600 Sobic004G359600 Sobic001G167900--Sobic004G359600 Sobic006G063900 Sobic006G063900 Sobic001G167900--Sobic006G063900 Sobic001G167900--Sobic001G015200 Sobic008G088821 Sobic008G088821 Sobic001G167900--Sobic008G088821 Sobic001G167900--Sobic002G351600 Sobic007G166300 Sobic007G166300 Sobic001G167900--Sobic007G166300 Sobic007G130400 Sobic007G130400 Sobic001G167900--Sobic007G130400 Sobic001G018000 Sobic001G018000 Sobic004G125800--Sobic001G018000 Sobic004G125800--Sobic001G104700 Sobic004G125800--Sobic002G030900 Sobic004G125800--Sobic010G101000 Sobic004G125800--Sobic009G225600 Sobic007G124500 Sobic007G124500 Sobic004G125800--Sobic007G124500 Sobic001G411100 Sobic001G411100 Sobic004G125800--Sobic001G411100 Sobic002G351200 Sobic002G351200 Sobic004G125800--Sobic002G351200 Sobic001G046000 Sobic001G046000 Sobic004G125800--Sobic001G046000 Sobic001G436400 Sobic001G436400 Sobic009G241100--Sobic001G436400 Sobic001G104600 Sobic001G104600 Sobic009G241100--Sobic001G104600 Sobic009G241100--Sobic003G103300 Sobic009G241100--Sobic001G411100 Sobic009G241100--Sobic007G124500 Sobic009G241100--Sobic005G062700 Sobic001G509200 Sobic001G509200 Sobic009G241100--Sobic001G509200 Sobic001G500700 Sobic001G500700 Sobic009G241100--Sobic001G500700 Sobic005G005400 Sobic005G005400 Sobic009G241100--Sobic005G005400 Sobic004G154800--Sobic004G055000 Sobic003G275200 Sobic003G275200 Sobic004G154800--Sobic003G275200 Sobic004G154800--Sobic001G167900 Sobic004G154800--Sobic006G108200 Sobic004G154800--Sobic004G124400 Sobic004G154800--Sobic004G028300 Sobic001G220000 Sobic001G220000 Sobic004G154800--Sobic001G220000 Sobic004G154800--Sobic002G351600 Sobic010G062500 Sobic010G062500 Sobic004G154800--Sobic010G062500 Sobic004G207400 Sobic004G207400 Sobic002G072400--Sobic004G207400 Sobic002G349100 Sobic002G349100 Sobic002G072400--Sobic002G349100 Sobic004G317700 Sobic004G317700 Sobic002G072400--Sobic004G317700 Sobic004G238200 Sobic004G238200 Sobic002G072400--Sobic004G238200 Sobic002G129400 Sobic002G129400 Sobic002G072400--Sobic002G129400 Sobic004G307100 Sobic004G307100 Sobic002G072400--Sobic004G307100 Sobic004G281900 Sobic004G281900 Sobic002G072400--Sobic004G281900 Sobic007G166200 Sobic007G166200 Sobic002G072400--Sobic007G166200 Sobic002G081400 Sobic002G081400 Sobic002G072400--Sobic002G081400 Sobic002G230600--Sobic010G062500 Sobic002G230600--Sobic004G113100 Sobic008G037800 Sobic008G037800 Sobic002G230600--Sobic008G037800 Sobic002G230600--Sobic001G167900 Sobic002G230600--Sobic004G124400 Sobic002G230600--Sobic004G154800 Sobic006G265900 Sobic006G265900 Sobic002G230600--Sobic006G265900 Sobic002G230600--Sobic002G351600 Sobic004G305900 Sobic004G305900 Sobic002G230600--Sobic004G305900 Sobic002G200900--Sobic006G108200 Sobic002G200900--Sobic004G281900 Sobic002G200900--Sobic002G351600 Sobic002G200900--Sobic001G220000 Sobic002G200900--Sobic004G055000 Sobic002G200900--Sobic003G275200 Sobic006G155500 Sobic006G155500 Sobic002G200900--Sobic006G155500 Sobic006G050400 Sobic006G050400 Sobic002G200900--Sobic006G050400 Sobic002G159100 Sobic002G159100 Sobic002G200900--Sobic002G159100
Octagon: transcription factors


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