Gene annotation
Transcriptome id Sobic.010G025850.2,Sobic.010G025850.3,Sobic.010G025850.1,Sobic.010G025850.4
Synonym -
Functional annotation -
UniProt A0A1W0VR55 , A0A1W0VR84
Pfam PF15963 PF10248 PF10248 PF15963
Panther DB PTHR13105 PTHR13105:SF9 PTHR13105:SF9 PTHR13105
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G22740 : glycine-rich protein
RAP-DB (Rice) LOC_Os06g04390.1 : expressed protein
MaizeGDB (Corn) Zm00025a040301 , Zm00025a050119 , Zm00025a021407 , Zm00025a021408 , Zm00025a021409
Brachypodium KQK19975 , KQK19974
Barley -
Wheat TraesCS1D02G314900 , TraesCS1D02G314900 , TraesCS1B02G326700 , TraesCS1B02G326700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G034100 D-alanine--D-alanine ligase family, putative, expressed -
2 Sobic.001G128300 chloride channel protein CLC-d, putative, expressed K05016: chloride channel 7
3 Sobic.004G306500 OsMADS22 - MADS-box family gene with MIKCc type-box, expressed -
4 Sobic.010G141800 expressed protein -
5 Sobic.001G100900 OsDegp14 - Putative Deg protease homologue, expressed -
6 Sobic.003G362600 AT hook motif family protein, expressed K15200: general transcription factor 3C polypeptide 2
7 Sobic.004G091100 nuclear protein ZAP-related, putative, expressed K17602: YLP motif-containing protein 1
8 Sobic.003G115900 lissencephaly type-1-like homology motif, putative, expressed -
9 Sobic.009G161550 - -
10 Sobic.010G014100 chaperone protein dnaJ, putative, expressed K03686: molecular chaperone DnaJ
11 Sobic.001G536400 THO complex subunit 1, putative, expressed K12878: THO complex subunit 1
12 Sobic.007G020600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@MATE efflux protein, putative, expressed -
13 Sobic.004G174200 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16, putative, expressed K12813: pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
14 Sobic.001G481900 SAC domain containing protein, putative, expressed -
15 Sobic.004G321100 SAC domain containing protein, putative, expressed -
16 Sobic.003G275700 myosin head family protein, expressed K10357: myosin V
17 Sobic.001G251200 phospholipid-transporting ATPase, putative, expressed K14802: DRS2, phospholipid-transporting ATPase
18 Sobic.003G159600 auxilin, putative, expressed -
19 Sobic.006G275100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@mitochondrial carrier protein, putative, expressed K15119: solute carrier family 25, member 39/40
20 Sobic.009G080700 expressed protein -


Gene co-expression network
sample Sobic010G025850 Sobic010G025850 Sobic002G034100 Sobic002G034100 Sobic010G025850--Sobic002G034100 Sobic001G128300 Sobic001G128300 Sobic010G025850--Sobic001G128300 Sobic004G306500 Sobic004G306500 Sobic010G025850--Sobic004G306500 Sobic010G141800 Sobic010G141800 Sobic010G025850--Sobic010G141800 Sobic001G100900 Sobic001G100900 Sobic010G025850--Sobic001G100900 Sobic003G362600 Sobic003G362600 Sobic010G025850--Sobic003G362600 Sobic004G091100 Sobic004G091100 Sobic010G025850--Sobic004G091100 Sobic003G115900 Sobic003G115900 Sobic010G025850--Sobic003G115900 Sobic009G161550 Sobic009G161550 Sobic010G025850--Sobic009G161550 Sobic004G023000 Sobic004G023000 Sobic002G034100--Sobic004G023000 Sobic002G034100--Sobic001G100900 Sobic002G034100--Sobic009G161550 Sobic004G263600 Sobic004G263600 Sobic002G034100--Sobic004G263600 Sobic002G034100--Sobic004G091100 Sobic005G110200 Sobic005G110200 Sobic002G034100--Sobic005G110200 Sobic004G174200 Sobic004G174200 Sobic002G034100--Sobic004G174200 Sobic005G090401 Sobic005G090401 Sobic002G034100--Sobic005G090401 Sobic002G034100--Sobic010G141800 Sobic009G165700 Sobic009G165700 Sobic001G128300--Sobic009G165700 Sobic001G451400 Sobic001G451400 Sobic001G128300--Sobic001G451400 Sobic001G251200 Sobic001G251200 Sobic001G128300--Sobic001G251200 Sobic001G128300--Sobic004G091100 Sobic001G043100 Sobic001G043100 Sobic001G128300--Sobic001G043100 Sobic009G109925 Sobic009G109925 Sobic001G128300--Sobic009G109925 Sobic003G198800 Sobic003G198800 Sobic001G128300--Sobic003G198800 Sobic001G441400 Sobic001G441400 Sobic001G128300--Sobic001G441400 Sobic002G211800 Sobic002G211800 Sobic001G128300--Sobic002G211800 Sobic001G481900 Sobic001G481900 Sobic004G306500--Sobic001G481900 Sobic002G187700 Sobic002G187700 Sobic004G306500--Sobic002G187700 Sobic007G020600 Sobic007G020600 Sobic004G306500--Sobic007G020600 Sobic003G086900 Sobic003G086900 Sobic004G306500--Sobic003G086900 Sobic010G196500 Sobic010G196500 Sobic004G306500--Sobic010G196500 Sobic004G306500--Sobic009G161550 Sobic004G306500--Sobic001G128300 Sobic004G306500--Sobic004G091100 Sobic004G169000 Sobic004G169000 Sobic004G306500--Sobic004G169000 Sobic010G141966 Sobic010G141966 Sobic010G141800--Sobic010G141966 Sobic010G141800--Sobic009G161550 Sobic005G182000 Sobic005G182000 Sobic010G141800--Sobic005G182000 Sobic010G141800--Sobic002G034100 Sobic009G139000 Sobic009G139000 Sobic010G141800--Sobic009G139000 Sobic008G122600 Sobic008G122600 Sobic010G141800--Sobic008G122600 Sobic010G141800--Sobic007G020600 Sobic010G141800--Sobic005G090401 Sobic009G092800 Sobic009G092800 Sobic010G141800--Sobic009G092800 Sobic001G100900--Sobic004G174200 Sobic003G155100 Sobic003G155100 Sobic001G100900--Sobic003G155100 Sobic004G291900 Sobic004G291900 Sobic001G100900--Sobic004G291900 Sobic009G201300 Sobic009G201300 Sobic001G100900--Sobic009G201300 Sobic009G074400 Sobic009G074400 Sobic001G100900--Sobic009G074400 Sobic008G001200 Sobic008G001200 Sobic001G100900--Sobic008G001200 Sobic006G219600 Sobic006G219600 Sobic001G100900--Sobic006G219600 Sobic001G100900--Sobic002G211800 Sobic003G220800 Sobic003G220800 Sobic001G100900--Sobic003G220800 Sobic003G362600--Sobic009G165700 Sobic003G362600--Sobic001G251200 Sobic003G166750 Sobic003G166750 Sobic003G362600--Sobic003G166750 Sobic003G362600--Sobic002G211800 Sobic008G087866 Sobic008G087866 Sobic003G362600--Sobic008G087866 Sobic003G362600--Sobic004G023000 Sobic003G093800 Sobic003G093800 Sobic003G362600--Sobic003G093800 Sobic003G362600--Sobic004G091100 Sobic003G362600--Sobic001G441400 Sobic004G091100--Sobic009G165700 Sobic004G091100--Sobic001G451400 Sobic010G118950 Sobic010G118950 Sobic004G091100--Sobic010G118950 Sobic009G191000 Sobic009G191000 Sobic004G091100--Sobic009G191000 Sobic004G091100--Sobic008G087866 Sobic004G091100--Sobic001G128300 Sobic001G534700 Sobic001G534700 Sobic004G091100--Sobic001G534700 Sobic003G422500 Sobic003G422500 Sobic004G091100--Sobic003G422500 Sobic001G050200 Sobic001G050200 Sobic004G091100--Sobic001G050200 Sobic003G115900--Sobic002G187700 Sobic003G115900--Sobic003G198800 Sobic001G381600 Sobic001G381600 Sobic003G115900--Sobic001G381600 Sobic006G002300 Sobic006G002300 Sobic003G115900--Sobic006G002300 Sobic003G115900--Sobic004G091100 Sobic003G115900--Sobic009G074400 Sobic003G115900--Sobic001G481900 Sobic001G107600 Sobic001G107600 Sobic003G115900--Sobic001G107600 Sobic010G139600 Sobic010G139600 Sobic003G115900--Sobic010G139600 Sobic009G161550--Sobic009G139000 Sobic009G161550--Sobic004G174200 Sobic009G161550--Sobic010G141800 Sobic009G161550--Sobic005G182000 Sobic009G161550--Sobic004G091100 Sobic009G161550--Sobic004G263600 Sobic009G161550--Sobic002G034100 Sobic001G365900 Sobic001G365900 Sobic009G161550--Sobic001G365900 Sobic006G142775 Sobic006G142775 Sobic009G161550--Sobic006G142775
Octagon: transcription factors


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