Gene annotation
Transcriptome id Sobic.010G138200.2,Sobic.010G138200.3
Synonym DCP5, Sb10g013950
Functional annotation expressed protein
UniProt C5Z2C6
Pfam PF14438 PF09532
Panther DB PTHR13586 PTHR13586:SF0
NCBI CDD -
KEGG Orthology K18749; LSM14, RAP55, protein LSM14
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G26110 : decapping 5
RAP-DB (Rice) LOC_Os06g30060.1 : expressed protein
MaizeGDB (Corn) Zm00025a035441 , Zm00025a042810
Brachypodium KQK02356
Barley HORVU3Hr1G000880.1 , HORVU3Hr1G000880.3 , HORVU3Hr1G000880.2 , HORVU3Hr1G000880.5 , HORVU3Hr1G000880.4 , HORVU3Hr1G000880.7 , HORVU3Hr1G000880.6 , HORVU3Hr1G000880.9 , HORVU3Hr1G000880.8
Wheat TraesCS3D02G004500 , TraesCS3A02G006100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G000800 expressed protein -
2 Sobic.002G275600 RFC1 - Putative clamp loader of PCNA, replication factor C subunit 1, expressed K10754: replication factor C subunit 1
3 Sobic.005G157100 THUMP domain-containing protein, putative, expressed K06963: TAN1, tRNA acetyltransferase TAN1
4 Sobic.008G131000 domain of unknown function family protein, expressed -
5 Sobic.003G006400 metallo-beta-lactamase family protein, putative, expressed K00784: ribonuclease Z
6 Sobic.001G170100 WD domain, G-beta repeat domain containing protein, expressed -
7 Sobic.008G083000 ZOS12-03 - C2H2 zinc finger protein, expressed -
8 Sobic.002G158700 TATA binding protein-associated factor, putative, expressed K03131: transcription initiation factor TFIID subunit 6
9 Sobic.008G014500 RNA recognition motif containing protein, expressed K13161: heterogeneous nuclear ribonucleoprotein R
10 Sobic.002G164800 SET domain containing protein, expressed K11423: [histone H3]-dimethyl-L-lysine36 N-methyltransferase
11 Sobic.001G081000 nucleotide-binding protein-like, putative, expressed K03593: mrp, ATP-binding protein involved in chromosome partitioning
12 Sobic.007G061000 mitotic checkpoint protein, putative, expressed K14298: RAE1, mRNA export factor
13 Sobic.010G236400 ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed K12847: USP39, U4/U6.U5 tri-snRNP-associated protein 2
14 Sobic.001G167200 DNA-directed polymerase, putative, expressed K03511: DNA polymerase kappa
15 Sobic.003G187500 ATP-binding region, ATPase-like domain containing protein, expressed -
16 Sobic.003G440700 leucine rich repeat domain containing protein, putative, expressed -
17 Sobic.001G091400 expressed protein -
18 Sobic.006G138000 expressed protein -
19 Sobic.008G002500 RCD1, putative, expressed -
20 Sobic.006G040800 expressed protein -


Gene co-expression network
sample Sobic010G138200 Sobic010G138200 Sobic007G000800 Sobic007G000800 Sobic010G138200--Sobic007G000800 Sobic002G275600 Sobic002G275600 Sobic010G138200--Sobic002G275600 Sobic005G157100 Sobic005G157100 Sobic010G138200--Sobic005G157100 Sobic008G131000 Sobic008G131000 Sobic010G138200--Sobic008G131000 Sobic003G006400 Sobic003G006400 Sobic010G138200--Sobic003G006400 Sobic001G170100 Sobic001G170100 Sobic010G138200--Sobic001G170100 Sobic008G083000 Sobic008G083000 Sobic010G138200--Sobic008G083000 Sobic002G158700 Sobic002G158700 Sobic010G138200--Sobic002G158700 Sobic008G014500 Sobic008G014500 Sobic010G138200--Sobic008G014500 Sobic007G000800--Sobic002G158700 Sobic003G401100 Sobic003G401100 Sobic007G000800--Sobic003G401100 Sobic008G149800 Sobic008G149800 Sobic007G000800--Sobic008G149800 Sobic010G245000 Sobic010G245000 Sobic007G000800--Sobic010G245000 Sobic002G259800 Sobic002G259800 Sobic007G000800--Sobic002G259800 Sobic001G167200 Sobic001G167200 Sobic007G000800--Sobic001G167200 Sobic004G345700 Sobic004G345700 Sobic007G000800--Sobic004G345700 Sobic007G000800--Sobic008G083000 Sobic008G173100 Sobic008G173100 Sobic007G000800--Sobic008G173100 Sobic005G160100 Sobic005G160100 Sobic002G275600--Sobic005G160100 Sobic009G247400 Sobic009G247400 Sobic002G275600--Sobic009G247400 Sobic002G275600--Sobic008G014500 Sobic001G363500 Sobic001G363500 Sobic002G275600--Sobic001G363500 Sobic001G219600 Sobic001G219600 Sobic002G275600--Sobic001G219600 Sobic001G441400 Sobic001G441400 Sobic002G275600--Sobic001G441400 Sobic002G397500 Sobic002G397500 Sobic002G275600--Sobic002G397500 Sobic002G275600--Sobic003G006400 Sobic010G209400 Sobic010G209400 Sobic002G275600--Sobic010G209400 Sobic005G157100--Sobic010G209400 Sobic006G226300 Sobic006G226300 Sobic005G157100--Sobic006G226300 Sobic005G157100--Sobic008G014500 Sobic005G157100--Sobic008G131000 Sobic005G157100--Sobic001G167200 Sobic005G157100--Sobic002G158700 Sobic001G511500 Sobic001G511500 Sobic005G157100--Sobic001G511500 Sobic003G258900 Sobic003G258900 Sobic005G157100--Sobic003G258900 Sobic010G065300 Sobic010G065300 Sobic005G157100--Sobic010G065300 Sobic010G236400 Sobic010G236400 Sobic008G131000--Sobic010G236400 Sobic008G131000--Sobic008G083000 Sobic003G266001 Sobic003G266001 Sobic008G131000--Sobic003G266001 Sobic002G396000 Sobic002G396000 Sobic008G131000--Sobic002G396000 Sobic008G131000--Sobic010G209400 Sobic008G131000--Sobic003G401100 Sobic006G194400 Sobic006G194400 Sobic008G131000--Sobic006G194400 Sobic004G084300 Sobic004G084300 Sobic008G131000--Sobic004G084300 Sobic003G187500 Sobic003G187500 Sobic008G131000--Sobic003G187500 Sobic006G208500 Sobic006G208500 Sobic003G006400--Sobic006G208500 Sobic006G200700 Sobic006G200700 Sobic003G006400--Sobic006G200700 Sobic003G006400--Sobic002G275600 Sobic001G369000 Sobic001G369000 Sobic003G006400--Sobic001G369000 Sobic006G138000 Sobic006G138000 Sobic003G006400--Sobic006G138000 Sobic010G151900 Sobic010G151900 Sobic003G006400--Sobic010G151900 Sobic001G145400 Sobic001G145400 Sobic003G006400--Sobic001G145400 Sobic006G077200 Sobic006G077200 Sobic003G006400--Sobic006G077200 Sobic010G007100 Sobic010G007100 Sobic003G006400--Sobic010G007100 Sobic001G170100--Sobic006G138000 Sobic001G518400 Sobic001G518400 Sobic001G170100--Sobic001G518400 Sobic001G426600 Sobic001G426600 Sobic001G170100--Sobic001G426600 Sobic001G335900 Sobic001G335900 Sobic001G170100--Sobic001G335900 Sobic001G170100--Sobic001G369000 Sobic010G275500 Sobic010G275500 Sobic001G170100--Sobic010G275500 Sobic003G240700 Sobic003G240700 Sobic001G170100--Sobic003G240700 Sobic010G147833 Sobic010G147833 Sobic001G170100--Sobic010G147833 Sobic007G019300 Sobic007G019300 Sobic001G170100--Sobic007G019300 Sobic005G084100 Sobic005G084100 Sobic008G083000--Sobic005G084100 Sobic010G279700 Sobic010G279700 Sobic008G083000--Sobic010G279700 Sobic008G083000--Sobic008G131000 Sobic001G281600 Sobic001G281600 Sobic008G083000--Sobic001G281600 Sobic009G050900 Sobic009G050900 Sobic008G083000--Sobic009G050900 Sobic008G083000--Sobic003G401100 Sobic008G011100 Sobic008G011100 Sobic008G083000--Sobic008G011100 Sobic004G018300 Sobic004G018300 Sobic008G083000--Sobic004G018300 Sobic008G083000--Sobic007G000800 Sobic003G401000 Sobic003G401000 Sobic002G158700--Sobic003G401000 Sobic001G464200 Sobic001G464200 Sobic002G158700--Sobic001G464200 Sobic002G158700--Sobic001G167200 Sobic004G031700 Sobic004G031700 Sobic002G158700--Sobic004G031700 Sobic003G445400 Sobic003G445400 Sobic002G158700--Sobic003G445400 Sobic002G158700--Sobic007G000800 Sobic007G061700 Sobic007G061700 Sobic002G158700--Sobic007G061700 Sobic002G158700--Sobic008G149800 Sobic002G158700--Sobic002G396000 Sobic010G166400 Sobic010G166400 Sobic008G014500--Sobic010G166400 Sobic001G091400 Sobic001G091400 Sobic008G014500--Sobic001G091400 Sobic008G014500--Sobic006G200700 Sobic008G014500--Sobic010G236400 Sobic008G014500--Sobic002G275600 Sobic007G075900 Sobic007G075900 Sobic008G014500--Sobic007G075900 Sobic008G014500--Sobic010G209400 Sobic009G119000 Sobic009G119000 Sobic008G014500--Sobic009G119000 Sobic001G522600 Sobic001G522600 Sobic008G014500--Sobic001G522600
Octagon: transcription factors


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