Gene annotation
Transcriptome id Sobic.010G179750.1
Synonym -
Functional annotation -
UniProt A0A1W0VTN7
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G238700 GDSL-like lipase/acylhydrolase, putative, expressed -
2 Sobic.008G013600 - -
3 Sobic.004G299000 expressed protein -
4 Sobic.003G179201 - -
5 Sobic.004G001300 -(PubMedID : 26976818)@erythronate-4-phosphate dehydrogenase domain containing protein, expressed K15893: glycerate dehydrogenase
6 Sobic.001G118100 B-box (BBX) protein(PubMedID : 30626335)@CCT/B-box zinc finger protein, putative, expressed -
7 Sobic.004G188400 photoperiodic flowering time gene(PubMedID : 22394582)@FAD binding domain of DNA photolyase domain containing protein, expressed K12118: cryptochrome 1
8 Sobic.003G003600 similar to Nodule inception protein-like(PubMedID : 29862293)@NIN, putative, expressed -
9 Sobic.002G231200 Rf1, mitochondrial precursor, putative, expressed K17710: pentatricopeptide repeat domain-containing protein 1
10 Sobic.003G149300 pentatricopeptide, putative, expressed -
11 Sobic.009G140500 no apical meristem protein, putative, expressed -
12 Sobic.005G159000 glyceraldehyde-3-phosphate dehydrogenase, putative, expressed -
13 Sobic.005G039500 signal recognition particle 54 kDa protein, putative, expressed K03106: SRP54, signal recognition particle subunit SRP54
14 Sobic.009G127400 PAC, putative, expressed -
15 Sobic.009G034200 CBL-interacting protein kinase 1(PubMedID : 26320239)@Interacting factor of CBLs(PubMedID : 19860013)@CAMK_KIN1/SNF1/Nim1_like.3 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K07198: PRKAA, 5'-AMP-activated protein kinase, catalytic alpha subunit
16 Sobic.006G058100 ATP-dependent Clp protease ATP-binding subunit clpA homolog CD4B,chloroplast precursor, putative, expressed K03696: ATP-dependent Clp protease ATP-binding subunit ClpC
17 Sobic.003G332800 GTPase-activating protein, putative, expressed -
18 Sobic.002G143500 sulfate transporter 4.1, chloroplast precursor, putative, expressed K18059: sulfate transporter 4
19 Sobic.009G209300 starch synthase, putative, expressed -
20 Sobic.001G327800 uncharacterized mscS family protein, putative, expressed K16052: ynaI, MscS family membrane protein


Gene co-expression network
sample Sobic010G179750 Sobic010G179750 Sobic003G238700 Sobic003G238700 Sobic010G179750--Sobic003G238700 Sobic008G013600 Sobic008G013600 Sobic010G179750--Sobic008G013600 Sobic004G299000 Sobic004G299000 Sobic010G179750--Sobic004G299000 Sobic003G179201 Sobic003G179201 Sobic010G179750--Sobic003G179201 Sobic004G001300 Sobic004G001300 Sobic010G179750--Sobic004G001300 Sobic001G118100 Sobic001G118100 Sobic010G179750--Sobic001G118100 Sobic004G188400 Sobic004G188400 Sobic010G179750--Sobic004G188400 Sobic003G003600 Sobic003G003600 Sobic010G179750--Sobic003G003600 Sobic002G231200 Sobic002G231200 Sobic010G179750--Sobic002G231200 Sobic003G332800 Sobic003G332800 Sobic003G238700--Sobic003G332800 Sobic007G116200 Sobic007G116200 Sobic003G238700--Sobic007G116200 Sobic009G209300 Sobic009G209300 Sobic003G238700--Sobic009G209300 Sobic003G396200 Sobic003G396200 Sobic003G238700--Sobic003G396200 Sobic006G216800 Sobic006G216800 Sobic003G238700--Sobic006G216800 Sobic005G045000 Sobic005G045000 Sobic003G238700--Sobic005G045000 Sobic010G256700 Sobic010G256700 Sobic003G238700--Sobic010G256700 Sobic004G028500 Sobic004G028500 Sobic003G238700--Sobic004G028500 Sobic007G106800 Sobic007G106800 Sobic003G238700--Sobic007G106800 Sobic008G013600--Sobic004G188400 Sobic004G065650 Sobic004G065650 Sobic008G013600--Sobic004G065650 Sobic001G486300 Sobic001G486300 Sobic008G013600--Sobic001G486300 Sobic009G034200 Sobic009G034200 Sobic008G013600--Sobic009G034200 Sobic005G110472 Sobic005G110472 Sobic008G013600--Sobic005G110472 Sobic001G067850 Sobic001G067850 Sobic008G013600--Sobic001G067850 Sobic007G037100 Sobic007G037100 Sobic008G013600--Sobic007G037100 Sobic007G037900 Sobic007G037900 Sobic008G013600--Sobic007G037900 Sobic004G290800 Sobic004G290800 Sobic008G013600--Sobic004G290800 Sobic001G468700 Sobic001G468700 Sobic004G299000--Sobic001G468700 Sobic003G017100 Sobic003G017100 Sobic004G299000--Sobic003G017100 Sobic004G299000--Sobic004G028500 Sobic002G121600 Sobic002G121600 Sobic004G299000--Sobic002G121600 Sobic003G247400 Sobic003G247400 Sobic004G299000--Sobic003G247400 Sobic009G191100 Sobic009G191100 Sobic004G299000--Sobic009G191100 Sobic004G258700 Sobic004G258700 Sobic004G299000--Sobic004G258700 Sobic007G113800 Sobic007G113800 Sobic004G299000--Sobic007G113800 Sobic004G299000--Sobic003G332800 Sobic003G429650 Sobic003G429650 Sobic003G179201--Sobic003G429650 Sobic006G048500 Sobic006G048500 Sobic003G179201--Sobic006G048500 Sobic003G179201--Sobic006G216800 Sobic002G133400 Sobic002G133400 Sobic003G179201--Sobic002G133400 Sobic003G179201--Sobic003G332800 Sobic003G148000 Sobic003G148000 Sobic003G179201--Sobic003G148000 Sobic010G202000 Sobic010G202000 Sobic003G179201--Sobic010G202000 Sobic008G162900 Sobic008G162900 Sobic003G179201--Sobic008G162900 Sobic004G082400 Sobic004G082400 Sobic003G179201--Sobic004G082400 Sobic004G001300--Sobic001G118100 Sobic007G204900 Sobic007G204900 Sobic004G001300--Sobic007G204900 Sobic008G001000 Sobic008G001000 Sobic004G001300--Sobic008G001000 Sobic003G442700 Sobic003G442700 Sobic004G001300--Sobic003G442700 Sobic003G161000 Sobic003G161000 Sobic004G001300--Sobic003G161000 Sobic001G098301 Sobic001G098301 Sobic004G001300--Sobic001G098301 Sobic004G001300--Sobic003G003600 Sobic003G137100 Sobic003G137100 Sobic004G001300--Sobic003G137100 Sobic001G060401 Sobic001G060401 Sobic004G001300--Sobic001G060401 Sobic001G118100--Sobic004G001300 Sobic006G225200 Sobic006G225200 Sobic001G118100--Sobic006G225200 Sobic005G036600 Sobic005G036600 Sobic001G118100--Sobic005G036600 Sobic009G140500 Sobic009G140500 Sobic001G118100--Sobic009G140500 Sobic004G113800 Sobic004G113800 Sobic001G118100--Sobic004G113800 Sobic001G484800 Sobic001G484800 Sobic001G118100--Sobic001G484800 Sobic002G291700 Sobic002G291700 Sobic001G118100--Sobic002G291700 Sobic007G052900 Sobic007G052900 Sobic001G118100--Sobic007G052900 Sobic001G118100--Sobic004G065650 Sobic001G372700 Sobic001G372700 Sobic004G188400--Sobic001G372700 Sobic004G188400--Sobic004G065650 Sobic009G127900 Sobic009G127900 Sobic004G188400--Sobic009G127900 Sobic003G268300 Sobic003G268300 Sobic004G188400--Sobic003G268300 Sobic006G082600 Sobic006G082600 Sobic004G188400--Sobic006G082600 Sobic004G188400--Sobic005G110472 Sobic004G196700 Sobic004G196700 Sobic004G188400--Sobic004G196700 Sobic004G188400--Sobic007G037900 Sobic002G165300 Sobic002G165300 Sobic004G188400--Sobic002G165300 Sobic001G065600 Sobic001G065600 Sobic003G003600--Sobic001G065600 Sobic001G073900 Sobic001G073900 Sobic003G003600--Sobic001G073900 Sobic003G003600--Sobic003G442700 Sobic003G003600--Sobic004G001300 Sobic001G418700 Sobic001G418700 Sobic003G003600--Sobic001G418700 Sobic003G003600--Sobic003G161000 Sobic003G003600--Sobic008G001000 Sobic001G158900 Sobic001G158900 Sobic003G003600--Sobic001G158900 Sobic002G385700 Sobic002G385700 Sobic003G003600--Sobic002G385700 Sobic001G327800 Sobic001G327800 Sobic002G231200--Sobic001G327800 Sobic001G261573 Sobic001G261573 Sobic002G231200--Sobic001G261573 Sobic003G343400 Sobic003G343400 Sobic002G231200--Sobic003G343400 Sobic003G234900 Sobic003G234900 Sobic002G231200--Sobic003G234900 Sobic006G010900 Sobic006G010900 Sobic002G231200--Sobic006G010900 Sobic003G085100 Sobic003G085100 Sobic002G231200--Sobic003G085100 Sobic001G531500 Sobic001G531500 Sobic002G231200--Sobic001G531500 Sobic002G118200 Sobic002G118200 Sobic002G231200--Sobic002G118200 Sobic003G150800 Sobic003G150800 Sobic002G231200--Sobic003G150800
Octagon: transcription factors


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