Gene annotation
Transcriptome id Sobic.010G250200.1,Sobic.010G250200.2
Synonym emb1997, Sb10g028850, ADCS
Functional annotation 4-amino-4-deoxychorismate synthase, putative, expressed
UniProt A0A1W0VUN1 , A0A194YL99
Pfam PF04715 PF00117 PF00425
Panther DB PTHR11236 PTHR11236:SF18
NCBI CDD -
KEGG Orthology K13950; para-aminobenzoate synthetase
Gene Ontology GO:0016833; oxo-acid-lyase activity GO:0009058biosynthetic process


Orthologs (automatic annotation)
TAIR AT2G28880 : para-aminobenzoate (PABA) synthase family protein
RAP-DB (Rice) LOC_Os06g48620.1 : 4-amino-4-deoxychorismate synthase, putative, expressed
MaizeGDB (Corn) Zm00025a041785
Brachypodium KQK17375
Barley HORVU7Hr1G097570.20 , HORVU7Hr1G097570.21 , HORVU7Hr1G097570.22 , HORVU7Hr1G097570.23 , HORVU7Hr1G097570.24 , HORVU7Hr1G097570.25 , HORVU7Hr1G097570.26 , HORVU7Hr1G097570.27 , HORVU7Hr1G097570.1 , HORVU7Hr1G097570.3 , HORVU7Hr1G097570.2 , HORVU7Hr1G097570.5 , HORVU7Hr1G097570.4 , HORVU7Hr1G097570.7 , HORVU7Hr1G097570.6 , HORVU7Hr1G097570.9 , HORVU7Hr1G097570.8 , HORVU7Hr1G097570.15 , HORVU7Hr1G097570.14 , HORVU7Hr1G097570.17 , HORVU7Hr1G097570.16 , HORVU7Hr1G097570.11 , HORVU7Hr1G097570.10 , HORVU7Hr1G097570.13 , HORVU7Hr1G097570.12 , HORVU7Hr1G097570.19 , HORVU7Hr1G097570.18
Wheat TraesCS7A02G422100 , TraesCS7A02G422100 , TraesCS7A02G422100 , TraesCS7D02G414300 , TraesCS7D02G414300 , TraesCS7D02G414300 , TraesCS7D02G414300 , TraesCS7B02G322500 , TraesCS7B02G322500 , TraesCS7B02G322500 , TraesCS7B02G322500 , TraesCS7B02G322500 , TraesCS7B02G322500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G159600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transporter family protein, putative, expressed -
2 Sobic.004G295800 chaperone protein dnaJ, putative, expressed K09503: DnaJ homolog subfamily A member 2
3 Sobic.003G109100 decarboxylase, putative, expressed K01634: SGPL1, sphinganine-1-phosphate aldolase
4 Sobic.001G474700 expressed protein -
5 Sobic.001G373200 lipase precursor, putative, expressed -
6 Sobic.009G094300 emp24/gp25L/p24 family protein, putative, expressed -
7 Sobic.007G024700 serine/threonine protein phosphatase 2A 59 kDa regulatory subunit Bgamma isoform, putative, expressed K11584: serine/threonine-protein phosphatase 2A regulatory subunit B'
8 Sobic.002G424000 transcription factor, putative, expressed K14431: transcription factor TGA
9 Sobic.001G382000 AGC_AGC_other_RS6K_like.1 - ACG kinases include homologs to PKA, PKG and PKC, expressed K04688: ribosomal protein S6 kinase beta
10 Sobic.001G137100 homeodomain protein, putative, expressed -
11 Sobic.004G354400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
12 Sobic.002G315200 DNA-binding bromodomain-containing protein, putative, expressed -
13 Sobic.003G179600 callose synthase-like enzyme(PubMedID : 25311645)@1,3-beta-glucan synthase component domain containing protein, expressed K11000: callose synthase
14 Sobic.004G052900 biotin--protein ligase, putative, expressed K01942: biotin---protein ligase
15 Sobic.005G024700 major facilitator superfamily antiporter, putative, expressed -
16 Sobic.008G191100 nodulin, putative, expressed -
17 Sobic.003G407300 histidine kinase, putative, expressed K14489: arabidopsis histidine kinase 2/3/4 (cytokinin receptor)
18 Sobic.003G036300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@oxidoreductase, putative, expressed -
19 Sobic.003G014500 "MHZ7(Ortholog in rice:Ma et al., 2013)"(PubMedID : 31659865)@ethylene-insensitive protein, putative, expressed K14513: ethylene-insensitive protein 2
20 Sobic.006G245400 -(PubMedID : 34525227)@NADPH reductase, putative, expressed K00327: NADPH-ferrihemoprotein reductase


Gene co-expression network
sample Sobic010G250200 Sobic010G250200 Sobic001G159600 Sobic001G159600 Sobic010G250200--Sobic001G159600 Sobic004G295800 Sobic004G295800 Sobic010G250200--Sobic004G295800 Sobic003G109100 Sobic003G109100 Sobic010G250200--Sobic003G109100 Sobic001G474700 Sobic001G474700 Sobic010G250200--Sobic001G474700 Sobic001G373200 Sobic001G373200 Sobic010G250200--Sobic001G373200 Sobic009G094300 Sobic009G094300 Sobic010G250200--Sobic009G094300 Sobic007G024700 Sobic007G024700 Sobic010G250200--Sobic007G024700 Sobic002G424000 Sobic002G424000 Sobic010G250200--Sobic002G424000 Sobic001G382000 Sobic001G382000 Sobic010G250200--Sobic001G382000 Sobic001G159600--Sobic010G250200 Sobic001G481900 Sobic001G481900 Sobic001G159600--Sobic001G481900 Sobic001G159600--Sobic003G109100 Sobic005G024200 Sobic005G024200 Sobic001G159600--Sobic005G024200 Sobic006G090500 Sobic006G090500 Sobic001G159600--Sobic006G090500 Sobic001G159600--Sobic001G382000 Sobic003G398100 Sobic003G398100 Sobic001G159600--Sobic003G398100 Sobic006G087700 Sobic006G087700 Sobic001G159600--Sobic006G087700 Sobic006G135600 Sobic006G135600 Sobic001G159600--Sobic006G135600 Sobic008G191100 Sobic008G191100 Sobic004G295800--Sobic008G191100 Sobic002G132000 Sobic002G132000 Sobic004G295800--Sobic002G132000 Sobic004G295800--Sobic007G024700 Sobic009G121100 Sobic009G121100 Sobic004G295800--Sobic009G121100 Sobic004G006200 Sobic004G006200 Sobic004G295800--Sobic004G006200 Sobic004G021100 Sobic004G021100 Sobic004G295800--Sobic004G021100 Sobic004G295800--Sobic001G373200 Sobic003G407300 Sobic003G407300 Sobic004G295800--Sobic003G407300 Sobic001G290000 Sobic001G290000 Sobic004G295800--Sobic001G290000 Sobic004G052900 Sobic004G052900 Sobic003G109100--Sobic004G052900 Sobic003G109100--Sobic007G024700 Sobic001G270400 Sobic001G270400 Sobic003G109100--Sobic001G270400 Sobic003G100800 Sobic003G100800 Sobic003G109100--Sobic003G100800 Sobic003G109100--Sobic009G094300 Sobic006G245400 Sobic006G245400 Sobic003G109100--Sobic006G245400 Sobic001G137100 Sobic001G137100 Sobic003G109100--Sobic001G137100 Sobic002G340100 Sobic002G340100 Sobic003G109100--Sobic002G340100 Sobic010G205800 Sobic010G205800 Sobic003G109100--Sobic010G205800 Sobic009G126900 Sobic009G126900 Sobic001G474700--Sobic009G126900 Sobic001G427100 Sobic001G427100 Sobic001G474700--Sobic001G427100 Sobic001G474700--Sobic001G373200 Sobic003G195500 Sobic003G195500 Sobic001G474700--Sobic003G195500 Sobic003G005600 Sobic003G005600 Sobic001G474700--Sobic003G005600 Sobic001G474700--Sobic004G295800 Sobic003G036800 Sobic003G036800 Sobic001G474700--Sobic003G036800 Sobic001G474700--Sobic007G024700 Sobic001G474700--Sobic002G132000 Sobic001G373200--Sobic003G407300 Sobic001G373200--Sobic009G121100 Sobic003G019100 Sobic003G019100 Sobic001G373200--Sobic003G019100 Sobic001G373200--Sobic004G295800 Sobic001G373200--Sobic007G024700 Sobic006G214500 Sobic006G214500 Sobic001G373200--Sobic006G214500 Sobic002G179900 Sobic002G179900 Sobic001G373200--Sobic002G179900 Sobic001G156100 Sobic001G156100 Sobic001G373200--Sobic001G156100 Sobic009G249200 Sobic009G249200 Sobic001G373200--Sobic009G249200 Sobic009G094300--Sobic007G024700 Sobic004G113400 Sobic004G113400 Sobic009G094300--Sobic004G113400 Sobic002G270500 Sobic002G270500 Sobic009G094300--Sobic002G270500 Sobic004G329400 Sobic004G329400 Sobic009G094300--Sobic004G329400 Sobic005G157000 Sobic005G157000 Sobic009G094300--Sobic005G157000 Sobic009G094300--Sobic004G052900 Sobic009G094300--Sobic001G270400 Sobic001G248300 Sobic001G248300 Sobic009G094300--Sobic001G248300 Sobic001G207400 Sobic001G207400 Sobic009G094300--Sobic001G207400 Sobic007G024700--Sobic002G270500 Sobic007G024700--Sobic009G094300 Sobic007G024700--Sobic009G249200 Sobic007G024700--Sobic004G052900 Sobic007G024700--Sobic001G270400 Sobic004G264400 Sobic004G264400 Sobic007G024700--Sobic004G264400 Sobic003G305200 Sobic003G305200 Sobic007G024700--Sobic003G305200 Sobic007G024700--Sobic002G132000 Sobic002G419800 Sobic002G419800 Sobic007G024700--Sobic002G419800 Sobic002G424000--Sobic004G006200 Sobic003G433100 Sobic003G433100 Sobic002G424000--Sobic003G433100 Sobic002G424000--Sobic007G024700 Sobic009G207000 Sobic009G207000 Sobic002G424000--Sobic009G207000 Sobic003G352600 Sobic003G352600 Sobic002G424000--Sobic003G352600 Sobic002G424000--Sobic001G137100 Sobic002G130800 Sobic002G130800 Sobic002G424000--Sobic002G130800 Sobic002G424000--Sobic002G132000 Sobic001G390800 Sobic001G390800 Sobic002G424000--Sobic001G390800 Sobic001G382000--Sobic001G137100 Sobic001G382000--Sobic006G087700 Sobic001G382000--Sobic009G249200 Sobic001G382000--Sobic007G024700 Sobic001G382000--Sobic009G094300 Sobic001G382000--Sobic003G109100 Sobic001G382000--Sobic004G052900 Sobic001G382000--Sobic001G373200 Sobic008G070500 Sobic008G070500 Sobic001G382000--Sobic008G070500
Octagon: transcription factors


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