Gene annotation
Transcriptome id Sobic.003G179600.1
Synonym ATGSL07, atgsl7, Sb03g023490, gsl07
Functional annotation callose synthase-like enzyme (PubMedID : 25311645)
1,3-beta-glucan synthase component domain containing protein, expressed
UniProt C5XM95
Pfam PF04652 PF14288 PF02364
Panther DB PTHR12741 PTHR12741:SF11
NCBI CDD -
KEGG Orthology K11000; callose synthase
Gene Ontology GO:0016020; membrane GO:0006075(1->3)-beta-D-glucan biosynthetic process GO:00038431,3-beta-D-glucan synthase activity GO:00001481,3-beta-D-glucan synthase complex


Orthologs (automatic annotation)
TAIR AT1G06490 : glucan synthase-like 7
RAP-DB (Rice) LOC_Os03g03610.2 : 1,3-beta-glucan synthase component domain containing protein, expressed
MaizeGDB (Corn) Zm00025a028844 , Zm00025a040387 , Zm00025a028882 , Zm00025a028884
Brachypodium PNT72150 , KQK08202 , KQK08201 , KQK08199
Barley HORVU2Hr1G118600.29 , HORVU2Hr1G118600.28 , HORVU2Hr1G118600.27 , HORVU2Hr1G118600.26 , HORVU2Hr1G118600.25 , HORVU2Hr1G118600.24 , HORVU2Hr1G118600.23 , HORVU2Hr1G118600.22 , HORVU2Hr1G118600.21 , HORVU2Hr1G118600.20 , HORVU3Hr1G042600.48 , HORVU3Hr1G042600.49 , HORVU3Hr1G042600.46 , HORVU3Hr1G042600.47 , HORVU3Hr1G042600.44 , HORVU3Hr1G042600.45 , HORVU3Hr1G042600.42 , HORVU3Hr1G042600.43 , HORVU3Hr1G042600.40 , HORVU3Hr1G042600.41 , HORVU3Hr1G042600.39 , HORVU3Hr1G042600.38 , HORVU3Hr1G042600.33 , HORVU3Hr1G042600.32 , HORVU3Hr1G042600.31 , HORVU3Hr1G042600.30 , HORVU3Hr1G042600.37 , HORVU3Hr1G042600.36 , HORVU3Hr1G042600.35 , HORVU3Hr1G042600.34 , HORVU2Hr1G118600.4 , HORVU2Hr1G118600.5 , HORVU2Hr1G118600.6 , HORVU2Hr1G118600.7 , HORVU2Hr1G118600.1 , HORVU2Hr1G118600.2 , HORVU2Hr1G118600.3 , HORVU2Hr1G118600.8 , HORVU2Hr1G118600.9 , HORVU2Hr1G118600.38 , HORVU2Hr1G118600.39 , HORVU2Hr1G118600.34 , HORVU2Hr1G118600.35 , HORVU2Hr1G118600.36 , HORVU2Hr1G118600.37 , HORVU2Hr1G118600.30 , HORVU2Hr1G118600.31 , HORVU2Hr1G118600.32 , HORVU2Hr1G118600.33 , HORVU3Hr1G042600.9 , HORVU3Hr1G042600.8 , HORVU3Hr1G042600.1 , HORVU3Hr1G042600.3 , HORVU3Hr1G042600.2 , HORVU3Hr1G042600.5 , HORVU3Hr1G042600.4 , HORVU3Hr1G042600.7 , HORVU3Hr1G042600.6 , HORVU3Hr1G042600.28 , HORVU3Hr1G042600.29 , HORVU3Hr1G042600.21 , HORVU3Hr1G042600.23 , HORVU3Hr1G042600.24 , HORVU3Hr1G042600.25 , HORVU3Hr1G042600.27 , HORVU3Hr1G042540.8 , HORVU3Hr1G042540.9 , HORVU3Hr1G042540.2 , HORVU3Hr1G042540.3 , HORVU3Hr1G042540.1 , HORVU3Hr1G042540.6 , HORVU3Hr1G042540.7 , HORVU3Hr1G042540.4 , HORVU3Hr1G042540.5 , HORVU2Hr1G118600.45 , HORVU2Hr1G118600.44 , HORVU2Hr1G118600.46 , HORVU2Hr1G118600.41 , HORVU2Hr1G118600.40 , HORVU2Hr1G118600.43 , HORVU2Hr1G118600.42 , HORVU2Hr1G118600.49 , HORVU2Hr1G118600.48 , HORVU3Hr1G042600.26 , HORVU3Hr1G042600.19 , HORVU3Hr1G042600.18 , HORVU3Hr1G042600.15 , HORVU3Hr1G042600.14 , HORVU3Hr1G042600.17 , HORVU3Hr1G042600.16 , HORVU3Hr1G042600.11 , HORVU3Hr1G042600.10 , HORVU3Hr1G042600.13 , HORVU3Hr1G042600.12 , HORVU2Hr1G118600.58 , HORVU2Hr1G118600.59 , HORVU2Hr1G118600.52 , HORVU2Hr1G118600.53 , HORVU2Hr1G118600.50 , HORVU2Hr1G118600.51 , HORVU2Hr1G118600.56 , HORVU2Hr1G118600.57 , HORVU3Hr1G042600.51 , HORVU3Hr1G042600.50 , HORVU3Hr1G042600.53 , HORVU3Hr1G042600.52 , HORVU3Hr1G042600.55 , HORVU3Hr1G042600.54 , HORVU3Hr1G042600.56 , HORVU3Hr1G042600.20 , HORVU3Hr1G042600.22 , HORVU2Hr1G118600.16 , HORVU2Hr1G118600.17 , HORVU2Hr1G118600.14 , HORVU2Hr1G118600.15 , HORVU2Hr1G118600.12 , HORVU2Hr1G118600.13 , HORVU2Hr1G118600.10 , HORVU2Hr1G118600.11 , HORVU2Hr1G118600.18 , HORVU2Hr1G118600.19 , HORVU2Hr1G118600.61 , HORVU2Hr1G118600.60 , HORVU2Hr1G118600.66 , HORVU2Hr1G118600.65 , HORVU2Hr1G118600.68
Wheat TraesCS3D02G201500 , TraesCS3A02G202000 , TraesCS3A02G202000 , TraesCS3D02G201500 , TraesCS2D02G600000 , TraesCS2D02G600000 , TraesCSU02G021500 , TraesCS3B02G229700 , TraesCS2A02G586600 , TraesCS6B02G001900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G078100 pantothenate kinase, putative, expressed K09680: type II pantothenate kinase
2 Sobic.010G250200 4-amino-4-deoxychorismate synthase, putative, expressed K13950: para-aminobenzoate synthetase
3 Sobic.004G354400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
4 Sobic.006G028200 glycine-rich protein, putative, expressed -
5 Sobic.002G303000 disease resistant protein, identical, putative, expressed -
6 Sobic.001G524200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@serine/threonine-protein kinase, putative, expressed -
7 Sobic.003G407300 histidine kinase, putative, expressed K14489: arabidopsis histidine kinase 2/3/4 (cytokinin receptor)
8 Sobic.004G295800 chaperone protein dnaJ, putative, expressed K09503: DnaJ homolog subfamily A member 2
9 Sobic.003G036900 glycine-rich protein, putative, expressed -
10 Sobic.001G427100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@mitochondrial carrier protein, putative, expressed K13354: SLC25A17, solute carrier family 25 (peroxisomal adenine nucleotide transporter), member 17
11 Sobic.001G168400 similar to Serine/threonine-protein kinase SAPK10(PubMedID : 29862293)@CAMK_CAMK_like.20 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K14498: serine/threonine-protein kinase SRK2
12 Sobic.009G121100 expressed protein -
13 Sobic.009G229800 Uncharacterized gene family(PubMedID : 29126242)@"Causal gene for dw1, a putative membrane protein of unknown function"(PubMedID : 26963094)@expressed protein -
14 Sobic.005G024700 major facilitator superfamily antiporter, putative, expressed -
15 Sobic.003G305200 glycerophosphoryl diester phosphodiesterase family protein, putative, expressed K01126: E3.1.4.46, glpQ, glycerophosphoryl diester phosphodiesterase
16 Sobic.001G373200 lipase precursor, putative, expressed -
17 Sobic.010G188400 copine-1, putative, expressed K16280: E3 ubiquitin-protein ligase RGLG
18 Sobic.004G330900 Positive cytokinine regulator(PubMedID : 30367619)@two-component response regulator, putative, expressed K14491: two-component response regulator ARR-B family
19 Sobic.010G064700 two-component response regulator, putative, expressed K14491: two-component response regulator ARR-B family
20 Sobic.010G189000 protein with a conserved N-terminal region, putative, expressed -


Gene co-expression network
sample Sobic003G179600 Sobic003G179600 Sobic010G078100 Sobic010G078100 Sobic003G179600--Sobic010G078100 Sobic010G250200 Sobic010G250200 Sobic003G179600--Sobic010G250200 Sobic004G354400 Sobic004G354400 Sobic003G179600--Sobic004G354400 Sobic006G028200 Sobic006G028200 Sobic003G179600--Sobic006G028200 Sobic002G303000 Sobic002G303000 Sobic003G179600--Sobic002G303000 Sobic001G524200 Sobic001G524200 Sobic003G179600--Sobic001G524200 Sobic003G407300 Sobic003G407300 Sobic003G179600--Sobic003G407300 Sobic004G295800 Sobic004G295800 Sobic003G179600--Sobic004G295800 Sobic003G036900 Sobic003G036900 Sobic003G179600--Sobic003G036900 Sobic008G160700 Sobic008G160700 Sobic010G078100--Sobic008G160700 Sobic010G078100--Sobic002G303000 Sobic009G121100 Sobic009G121100 Sobic010G078100--Sobic009G121100 Sobic006G214500 Sobic006G214500 Sobic010G078100--Sobic006G214500 Sobic009G027000 Sobic009G027000 Sobic010G078100--Sobic009G027000 Sobic001G359400 Sobic001G359400 Sobic010G078100--Sobic001G359400 Sobic001G373100 Sobic001G373100 Sobic010G078100--Sobic001G373100 Sobic006G122400 Sobic006G122400 Sobic010G078100--Sobic006G122400 Sobic010G078100--Sobic004G295800 Sobic001G159600 Sobic001G159600 Sobic010G250200--Sobic001G159600 Sobic010G250200--Sobic004G295800 Sobic003G109100 Sobic003G109100 Sobic010G250200--Sobic003G109100 Sobic001G474700 Sobic001G474700 Sobic010G250200--Sobic001G474700 Sobic001G373200 Sobic001G373200 Sobic010G250200--Sobic001G373200 Sobic009G094300 Sobic009G094300 Sobic010G250200--Sobic009G094300 Sobic007G024700 Sobic007G024700 Sobic010G250200--Sobic007G024700 Sobic002G424000 Sobic002G424000 Sobic010G250200--Sobic002G424000 Sobic001G382000 Sobic001G382000 Sobic010G250200--Sobic001G382000 Sobic003G313400 Sobic003G313400 Sobic004G354400--Sobic003G313400 Sobic004G354400--Sobic004G295800 Sobic004G354400--Sobic010G250200 Sobic004G354400--Sobic001G359400 Sobic004G354400--Sobic010G078100 Sobic010G188400 Sobic010G188400 Sobic004G354400--Sobic010G188400 Sobic008G191100 Sobic008G191100 Sobic004G354400--Sobic008G191100 Sobic004G354400--Sobic003G179600 Sobic004G163300 Sobic004G163300 Sobic004G354400--Sobic004G163300 Sobic003G401000 Sobic003G401000 Sobic006G028200--Sobic003G401000 Sobic001G094000 Sobic001G094000 Sobic006G028200--Sobic001G094000 Sobic009G040700 Sobic009G040700 Sobic006G028200--Sobic009G040700 Sobic010G189000 Sobic010G189000 Sobic006G028200--Sobic010G189000 Sobic003G187400 Sobic003G187400 Sobic006G028200--Sobic003G187400 Sobic006G046700 Sobic006G046700 Sobic006G028200--Sobic006G046700 Sobic001G296500 Sobic001G296500 Sobic006G028200--Sobic001G296500 Sobic006G028200--Sobic003G036900 Sobic001G477800 Sobic001G477800 Sobic006G028200--Sobic001G477800 Sobic002G303000--Sobic010G078100 Sobic002G303000--Sobic009G121100 Sobic002G303000--Sobic008G160700 Sobic002G303000--Sobic003G407300 Sobic002G303000--Sobic009G040700 Sobic005G007800 Sobic005G007800 Sobic002G303000--Sobic005G007800 Sobic004G196700 Sobic004G196700 Sobic002G303000--Sobic004G196700 Sobic009G235900 Sobic009G235900 Sobic002G303000--Sobic009G235900 Sobic008G024600 Sobic008G024600 Sobic002G303000--Sobic008G024600 Sobic004G027100 Sobic004G027100 Sobic001G524200--Sobic004G027100 Sobic010G217400 Sobic010G217400 Sobic001G524200--Sobic010G217400 Sobic007G130600 Sobic007G130600 Sobic001G524200--Sobic007G130600 Sobic003G145900 Sobic003G145900 Sobic001G524200--Sobic003G145900 Sobic001G524200--Sobic005G007800 Sobic001G524200--Sobic010G078100 Sobic006G114500 Sobic006G114500 Sobic001G524200--Sobic006G114500 Sobic001G524200--Sobic002G303000 Sobic001G524200--Sobic009G121100 Sobic003G407300--Sobic009G121100 Sobic003G407300--Sobic001G373200 Sobic003G019100 Sobic003G019100 Sobic003G407300--Sobic003G019100 Sobic003G407300--Sobic006G214500 Sobic001G507300 Sobic001G507300 Sobic003G407300--Sobic001G507300 Sobic003G407300--Sobic004G295800 Sobic009G229800 Sobic009G229800 Sobic003G407300--Sobic009G229800 Sobic003G407300--Sobic002G303000 Sobic003G407300--Sobic007G024700 Sobic004G295800--Sobic008G191100 Sobic002G132000 Sobic002G132000 Sobic004G295800--Sobic002G132000 Sobic004G295800--Sobic007G024700 Sobic004G295800--Sobic009G121100 Sobic004G006200 Sobic004G006200 Sobic004G295800--Sobic004G006200 Sobic004G021100 Sobic004G021100 Sobic004G295800--Sobic004G021100 Sobic004G295800--Sobic001G373200 Sobic004G295800--Sobic003G407300 Sobic001G290000 Sobic001G290000 Sobic004G295800--Sobic001G290000 Sobic001G155000 Sobic001G155000 Sobic003G036900--Sobic001G155000 Sobic010G201500 Sobic010G201500 Sobic003G036900--Sobic010G201500 Sobic010G275500 Sobic010G275500 Sobic003G036900--Sobic010G275500 Sobic003G036900--Sobic006G028200 Sobic004G146500 Sobic004G146500 Sobic003G036900--Sobic004G146500 Sobic010G116600 Sobic010G116600 Sobic003G036900--Sobic010G116600 Sobic010G053800 Sobic010G053800 Sobic003G036900--Sobic010G053800 Sobic004G138000 Sobic004G138000 Sobic003G036900--Sobic004G138000 Sobic006G035300 Sobic006G035300 Sobic003G036900--Sobic006G035300
Octagon: transcription factors


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