Gene annotation
Transcriptome id Sobic.010G273000.3
Synonym RPS2
Functional annotation Leucine Rich Repeat family protein, expressed
UniProt A0A194YLW1 , C6JRV2
Pfam -
Panther DB PTHR23155 PTHR23155:SF498
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G19050 : NB-ARC domain-containing disease resistance protein
RAP-DB (Rice) LOC_Os04g02520.1 : Leucine Rich Repeat family protein, expressed
MaizeGDB (Corn) -
Brachypodium PNT75354 , PNT75352 , PNT75353 , PNT75350 , PNT75351 , KQJ92820 , KQJ81681
Barley HORVU7Hr1G002900.2 , HORVU7Hr1G002900.3 , HORVU7Hr1G002900.1 , HORVU7Hr1G002900.6 , HORVU7Hr1G002900.7 , HORVU7Hr1G002900.4 , HORVU7Hr1G002900.5
Wheat TraesCS2A02G044200 , TraesCS2D02G043000 , TraesCS2D02G043100 , TraesCS2D02G042900 , TraesCS2A02G044100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G234700 FGGY family of carbohydrate kinases, putative, expressed -
2 Sobic.003G241700 SET domain containing protein, expressed -
3 Sobic.003G170700 expressed protein -
4 Sobic.003G043000 expressed protein -
5 Sobic.004G130300 phosphatidylinositol 3- and 4-kinase family protein, putative, expressed -
6 Sobic.010G279450 - K11446: KDM5, [histone H3]-trimethyl-L-lysine4 demethylase
7 Sobic.010G244900 auxin efflux carrier, putative, expressed K17964: leucine-rich PPR motif-containing protein, mitochondrial
8 Sobic.004G337800 UDP-glucose glycoprotein glucosyltransferase 1 precursor, putative, expressed K11718: UDP-glucose:glycoprotein glucosyltransferase
9 Sobic.006G224100 expressed protein -
10 Sobic.002G252400 expressed protein K10706: SETX, senataxin
11 Sobic.003G296900 expressed protein -
12 Sobic.K028600 expressed protein -
13 Sobic.003G444800 expressed protein -
14 Sobic.002G042800 expressed protein -
15 Sobic.009G092020 - -
16 Sobic.009G092060 - -
17 Sobic.004G357100 expressed protein -
18 Sobic.003G039900 OsFBDUF1 - F-box and DUF domain containing protein, expressed -
19 Sobic.001G094600 pentatricopeptide, putative, expressed -
20 Sobic.005G034700 PHD-finger family protein, expressed -


Gene co-expression network
sample Sobic010G273000 Sobic010G273000 Sobic006G234700 Sobic006G234700 Sobic010G273000--Sobic006G234700 Sobic003G241700 Sobic003G241700 Sobic010G273000--Sobic003G241700 Sobic003G170700 Sobic003G170700 Sobic010G273000--Sobic003G170700 Sobic003G043000 Sobic003G043000 Sobic010G273000--Sobic003G043000 Sobic004G130300 Sobic004G130300 Sobic010G273000--Sobic004G130300 Sobic010G279450 Sobic010G279450 Sobic010G273000--Sobic010G279450 Sobic010G244900 Sobic010G244900 Sobic010G273000--Sobic010G244900 Sobic004G337800 Sobic004G337800 Sobic010G273000--Sobic004G337800 Sobic006G224100 Sobic006G224100 Sobic010G273000--Sobic006G224100 Sobic004G096400 Sobic004G096400 Sobic006G234700--Sobic004G096400 Sobic010G059500 Sobic010G059500 Sobic006G234700--Sobic010G059500 Sobic009G192300 Sobic009G192300 Sobic006G234700--Sobic009G192300 Sobic007G042400 Sobic007G042400 Sobic006G234700--Sobic007G042400 Sobic003G444800 Sobic003G444800 Sobic006G234700--Sobic003G444800 Sobic001G493200 Sobic001G493200 Sobic006G234700--Sobic001G493200 Sobic009G084900 Sobic009G084900 Sobic006G234700--Sobic009G084900 Sobic001G433800 Sobic001G433800 Sobic006G234700--Sobic001G433800 Sobic002G083500 Sobic002G083500 Sobic006G234700--Sobic002G083500 Sobic003G241700--Sobic003G043000 Sobic003G296900 Sobic003G296900 Sobic003G241700--Sobic003G296900 Sobic009G228000 Sobic009G228000 Sobic003G241700--Sobic009G228000 Sobic004G209700 Sobic004G209700 Sobic003G241700--Sobic004G209700 Sobic004G265500 Sobic004G265500 Sobic003G241700--Sobic004G265500 Sobic010G000800 Sobic010G000800 Sobic003G241700--Sobic010G000800 Sobic003G241700--Sobic006G234700 Sobic004G213800 Sobic004G213800 Sobic003G241700--Sobic004G213800 Sobic010G034100 Sobic010G034100 Sobic003G241700--Sobic010G034100 Sobic009G256400 Sobic009G256400 Sobic003G170700--Sobic009G256400 Sobic008G088872 Sobic008G088872 Sobic003G170700--Sobic008G088872 Sobic001G370900 Sobic001G370900 Sobic003G170700--Sobic001G370900 Sobic001G457800 Sobic001G457800 Sobic003G170700--Sobic001G457800 Sobic005G162500 Sobic005G162500 Sobic003G170700--Sobic005G162500 Sobic003G072200 Sobic003G072200 Sobic003G170700--Sobic003G072200 Sobic001G542400 Sobic001G542400 Sobic003G170700--Sobic001G542400 Sobic006G040500 Sobic006G040500 Sobic003G170700--Sobic006G040500 Sobic004G040500 Sobic004G040500 Sobic003G170700--Sobic004G040500 Sobic003G043000--Sobic004G265500 Sobic001G308400 Sobic001G308400 Sobic003G043000--Sobic001G308400 Sobic003G043000--Sobic003G296900 Sobic004G357100 Sobic004G357100 Sobic003G043000--Sobic004G357100 Sobic003G043000--Sobic003G241700 Sobic003G043000--Sobic009G228000 SobicK028600 SobicK028600 Sobic003G043000--SobicK028600 Sobic003G163200 Sobic003G163200 Sobic003G043000--Sobic003G163200 Sobic002G227500 Sobic002G227500 Sobic003G043000--Sobic002G227500 Sobic001G532600 Sobic001G532600 Sobic004G130300--Sobic001G532600 Sobic004G130300--Sobic003G241700 Sobic007G125000 Sobic007G125000 Sobic004G130300--Sobic007G125000 Sobic010G204900 Sobic010G204900 Sobic004G130300--Sobic010G204900 Sobic001G014200 Sobic001G014200 Sobic004G130300--Sobic001G014200 Sobic006G039400 Sobic006G039400 Sobic004G130300--Sobic006G039400 Sobic001G405600 Sobic001G405600 Sobic004G130300--Sobic001G405600 Sobic003G311900 Sobic003G311900 Sobic004G130300--Sobic003G311900 Sobic005G023800 Sobic005G023800 Sobic004G130300--Sobic005G023800 Sobic005G112300 Sobic005G112300 Sobic010G279450--Sobic005G112300 Sobic010G139000 Sobic010G139000 Sobic010G279450--Sobic010G139000 Sobic002G405800 Sobic002G405800 Sobic010G279450--Sobic002G405800 Sobic004G314000 Sobic004G314000 Sobic010G279450--Sobic004G314000 Sobic003G059750 Sobic003G059750 Sobic010G279450--Sobic003G059750 Sobic008G028700 Sobic008G028700 Sobic010G279450--Sobic008G028700 Sobic001G363500 Sobic001G363500 Sobic010G279450--Sobic001G363500 Sobic004G009600 Sobic004G009600 Sobic010G279450--Sobic004G009600 Sobic010G247800 Sobic010G247800 Sobic010G279450--Sobic010G247800 Sobic004G172500 Sobic004G172500 Sobic010G244900--Sobic004G172500 Sobic002G292900 Sobic002G292900 Sobic010G244900--Sobic002G292900 Sobic010G244900--Sobic004G213800 Sobic001G237600 Sobic001G237600 Sobic010G244900--Sobic001G237600 Sobic004G320700 Sobic004G320700 Sobic010G244900--Sobic004G320700 Sobic010G244900--Sobic006G039400 Sobic010G244900--Sobic003G043000 Sobic010G244900--Sobic003G241700 Sobic005G150600 Sobic005G150600 Sobic010G244900--Sobic005G150600 Sobic001G301200 Sobic001G301200 Sobic004G337800--Sobic001G301200 Sobic004G337800--Sobic010G059500 Sobic004G337800--Sobic009G084900 Sobic003G405500 Sobic003G405500 Sobic004G337800--Sobic003G405500 Sobic009G131300 Sobic009G131300 Sobic004G337800--Sobic009G131300 Sobic001G214600 Sobic001G214600 Sobic004G337800--Sobic001G214600 Sobic004G337800--Sobic002G227500 Sobic006G021700 Sobic006G021700 Sobic004G337800--Sobic006G021700 Sobic008G124800 Sobic008G124800 Sobic004G337800--Sobic008G124800 Sobic006G224100--Sobic003G043000 Sobic009G107300 Sobic009G107300 Sobic006G224100--Sobic009G107300 Sobic003G021600 Sobic003G021600 Sobic006G224100--Sobic003G021600 Sobic009G040325 Sobic009G040325 Sobic006G224100--Sobic009G040325 Sobic006G224100--Sobic004G265500 Sobic006G224100--Sobic002G227500 Sobic001G118000 Sobic001G118000 Sobic006G224100--Sobic001G118000 Sobic002G363800 Sobic002G363800 Sobic006G224100--Sobic002G363800 Sobic006G224100--Sobic003G241700
Octagon: transcription factors


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