Gene annotation
Transcriptome id Sobic.010G277900.2,Sobic.010G277900.4,Sobic.010G277900.1,Sobic.010G277900.3
Synonym RHL1, Sb10g031135, HYP7
Functional annotation ROOT HAIRLESS 1, putative, expressed
UniProt A0A1W0VV74 , A0A1W0VVB6 , A0A1W0VV95 , A0A194YLZ5
Pfam -
Panther DB PTHR35698 PTHR35698:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G48380 : root hair initiation protein root hairless 1 (RHL1)
RAP-DB (Rice) LOC_Os07g07580.3 : ROOT HAIRLESS 1, putative, expressed
MaizeGDB (Corn) Zm00025a041675
Brachypodium -
Barley HORVU7Hr1G119950.4 , HORVU7Hr1G119950.5 , HORVU7Hr1G119950.2 , HORVU7Hr1G119950.3 , HORVU7Hr1G119950.1
Wheat TraesCS7B02G502100 , TraesCS7D02G548300 , TraesCS7A02G561500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G085300 phytosulfokine receptor precursor, putative, expressed -
2 Sobic.004G223000 MIF4G domain containing protein, putative, expressed K14327: UPF2, regulator of nonsense transcripts 2
3 Sobic.003G110000 TBC domain containing protein, expressed -
4 Sobic.001G050200 expressed protein -
5 Sobic.001G117200 AGC_AGC_other_GWLd.2 - ACG kinases include homologs to PKA, PKG and PKC, expressed -
6 Sobic.001G415300 "domain confirmed by Pfam database, expressed in leaf, stem and root, expression induced by IAA, BR and ABA treatments"(PubMedID : 20528920)@ABC transporter, ATP-binding protein, putative, expressed K05658: ABCB1, ATP-binding cassette, subfamily B (MDR/TAP), member 1
7 Sobic.004G314700 cyclic nucleotide-gated ion channel, putative, expressed K05391: cyclic nucleotide gated channel, plant
8 Sobic.008G018900 protein of unknown function, DUF618 domain containing protein, expressed K15559: regulator of Ty1 transposition protein 103
9 Sobic.010G169600 OsCML2 - Calmodulin-related calcium sensor protein, expressed -
10 Sobic.001G457900 expressed protein -
11 Sobic.008G087866 - -
12 Sobic.006G082400 expressed protein -
13 Sobic.003G422500 expressed protein -
14 Sobic.005G122700 PPR repeat domain containing protein, putative, expressed -
15 Sobic.008G098900 ubiquitin carboxyl-terminal hydrolase, putative, expressed K11838: USP7, ubiquitin carboxyl-terminal hydrolase 7
16 Sobic.001G007100 expressed protein -
17 Sobic.010G139600 STE_PAK_Ste20_STLK.5 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed K08835: OXSR1, serine/threonine-protein kinase OSR1/STK39
18 Sobic.008G011000 splicing factor, putative, expressed K13109: IK, RED, IK cytokine
19 Sobic.007G133700 expressed protein -
20 Sobic.010G009200 AMP-binding enzyme family protein, expressed K00142: acyl-CoA synthetase


Gene co-expression network
sample Sobic010G277900 Sobic010G277900 Sobic001G085300 Sobic001G085300 Sobic010G277900--Sobic001G085300 Sobic004G223000 Sobic004G223000 Sobic010G277900--Sobic004G223000 Sobic003G110000 Sobic003G110000 Sobic010G277900--Sobic003G110000 Sobic001G050200 Sobic001G050200 Sobic010G277900--Sobic001G050200 Sobic001G117200 Sobic001G117200 Sobic010G277900--Sobic001G117200 Sobic001G415300 Sobic001G415300 Sobic010G277900--Sobic001G415300 Sobic004G314700 Sobic004G314700 Sobic010G277900--Sobic004G314700 Sobic008G018900 Sobic008G018900 Sobic010G277900--Sobic008G018900 Sobic010G169600 Sobic010G169600 Sobic010G277900--Sobic010G169600 Sobic001G390800 Sobic001G390800 Sobic001G085300--Sobic001G390800 Sobic003G313500 Sobic003G313500 Sobic001G085300--Sobic003G313500 Sobic001G085300--Sobic001G117200 Sobic001G085300--Sobic003G110000 Sobic003G422500 Sobic003G422500 Sobic001G085300--Sobic003G422500 Sobic001G085300--Sobic001G415300 Sobic010G139600 Sobic010G139600 Sobic001G085300--Sobic010G139600 Sobic003G196300 Sobic003G196300 Sobic001G085300--Sobic003G196300 Sobic001G268200 Sobic001G268200 Sobic001G085300--Sobic001G268200 Sobic001G230000 Sobic001G230000 Sobic004G223000--Sobic001G230000 Sobic010G206900 Sobic010G206900 Sobic004G223000--Sobic010G206900 Sobic003G186000 Sobic003G186000 Sobic004G223000--Sobic003G186000 Sobic002G316600 Sobic002G316600 Sobic004G223000--Sobic002G316600 Sobic001G527800 Sobic001G527800 Sobic004G223000--Sobic001G527800 Sobic007G062800 Sobic007G062800 Sobic004G223000--Sobic007G062800 Sobic004G276400 Sobic004G276400 Sobic004G223000--Sobic004G276400 Sobic010G010700 Sobic010G010700 Sobic004G223000--Sobic010G010700 Sobic001G370900 Sobic001G370900 Sobic004G223000--Sobic001G370900 Sobic008G098900 Sobic008G098900 Sobic003G110000--Sobic008G098900 Sobic003G110000--Sobic001G085300 Sobic003G166750 Sobic003G166750 Sobic003G110000--Sobic003G166750 Sobic002G275700 Sobic002G275700 Sobic003G110000--Sobic002G275700 Sobic002G430000 Sobic002G430000 Sobic003G110000--Sobic002G430000 Sobic001G194200 Sobic001G194200 Sobic003G110000--Sobic001G194200 Sobic003G110000--Sobic001G370900 Sobic009G131300 Sobic009G131300 Sobic003G110000--Sobic009G131300 Sobic003G110000--Sobic001G117200 Sobic002G419800 Sobic002G419800 Sobic001G050200--Sobic002G419800 Sobic001G050200--Sobic003G422500 Sobic009G027300 Sobic009G027300 Sobic001G050200--Sobic009G027300 Sobic003G247300 Sobic003G247300 Sobic001G050200--Sobic003G247300 Sobic009G191000 Sobic009G191000 Sobic001G050200--Sobic009G191000 Sobic007G075400 Sobic007G075400 Sobic001G050200--Sobic007G075400 Sobic004G269200 Sobic004G269200 Sobic001G050200--Sobic004G269200 Sobic004G331100 Sobic004G331100 Sobic001G050200--Sobic004G331100 Sobic003G101400 Sobic003G101400 Sobic001G050200--Sobic003G101400 Sobic001G117200--Sobic008G098900 Sobic003G408600 Sobic003G408600 Sobic001G117200--Sobic003G408600 Sobic001G117200--Sobic002G430000 Sobic001G540400 Sobic001G540400 Sobic001G117200--Sobic001G540400 Sobic001G137000 Sobic001G137000 Sobic001G117200--Sobic001G137000 Sobic004G113400 Sobic004G113400 Sobic001G117200--Sobic004G113400 Sobic001G542500 Sobic001G542500 Sobic001G117200--Sobic001G542500 Sobic001G058700 Sobic001G058700 Sobic001G117200--Sobic001G058700 Sobic008G092600 Sobic008G092600 Sobic001G117200--Sobic008G092600 Sobic002G137400 Sobic002G137400 Sobic001G415300--Sobic002G137400 Sobic004G004300 Sobic004G004300 Sobic001G415300--Sobic004G004300 Sobic001G281100 Sobic001G281100 Sobic001G415300--Sobic001G281100 Sobic001G415300--Sobic001G085300 Sobic003G337300 Sobic003G337300 Sobic001G415300--Sobic003G337300 Sobic006G126100 Sobic006G126100 Sobic001G415300--Sobic006G126100 Sobic001G534800 Sobic001G534800 Sobic001G415300--Sobic001G534800 Sobic004G002100 Sobic004G002100 Sobic001G415300--Sobic004G002100 Sobic001G457900 Sobic001G457900 Sobic001G415300--Sobic001G457900 Sobic004G314700--Sobic001G050200 Sobic007G060201 Sobic007G060201 Sobic004G314700--Sobic007G060201 Sobic001G305500 Sobic001G305500 Sobic004G314700--Sobic001G305500 Sobic001G207400 Sobic001G207400 Sobic004G314700--Sobic001G207400 Sobic010G232600 Sobic010G232600 Sobic004G314700--Sobic010G232600 Sobic004G351100 Sobic004G351100 Sobic004G314700--Sobic004G351100 Sobic001G196500 Sobic001G196500 Sobic004G314700--Sobic001G196500 Sobic001G107600 Sobic001G107600 Sobic004G314700--Sobic001G107600 Sobic004G314700--Sobic001G415300 Sobic008G018900--Sobic003G186000 Sobic006G055200 Sobic006G055200 Sobic008G018900--Sobic006G055200 Sobic008G018900--Sobic002G316600 Sobic003G205200 Sobic003G205200 Sobic008G018900--Sobic003G205200 Sobic008G018900--Sobic001G194200 Sobic002G308700 Sobic002G308700 Sobic008G018900--Sobic002G308700 Sobic008G001200 Sobic008G001200 Sobic008G018900--Sobic008G001200 Sobic008G018900--Sobic004G276400 Sobic003G389200 Sobic003G389200 Sobic008G018900--Sobic003G389200 Sobic010G169600--Sobic003G186000 Sobic010G169600--Sobic004G276400 Sobic010G169600--Sobic008G098900 Sobic010G169600--Sobic001G370900 Sobic010G169600--Sobic002G308700 Sobic008G085300 Sobic008G085300 Sobic010G169600--Sobic008G085300 Sobic006G184900 Sobic006G184900 Sobic010G169600--Sobic006G184900 Sobic010G169600--Sobic004G223000 Sobic005G162500 Sobic005G162500 Sobic010G169600--Sobic005G162500
Octagon: transcription factors


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