Gene annotation
Transcriptome id Sobic.010G278700.2,Sobic.010G278700.1
Synonym Sb10g031220
Functional annotation lysine ketoglutarate reductase trans-splicing related 1, putative, expressed
UniProt A0A1W0VV72 , C5Z2M9
Pfam PF05212
Panther DB PTHR31210 PTHR31210:SF11
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G61240 : Protein of unknown function (DUF707)
RAP-DB (Rice) LOC_Os06g51520.1 : lysine ketoglutarate reductase trans-splicing related 1, putative, expressed
MaizeGDB (Corn) Zm00025a018590
Brachypodium KQK16570 , KQK16571
Barley HORVU7Hr1G119620.4 , HORVU7Hr1G119620.1 , HORVU7Hr1G119620.2 , HORVU7Hr1G119620.3
Wheat TraesCS7B02G498600 , TraesCS7B02G498600 , TraesCS7A02G564200 , TraesCS7A02G564200 , TraesCS7D02G546700
Populus -


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cDNA sequences
Sobic.010G278700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G088900 serine/threonine-protein kinase TOUSLED, putative, expressed K08864: tousled-like kinase
2 Sobic.004G312100 HYS1, putative, expressed -
3 Sobic.001G097500 expressed protein -
4 Sobic.003G005900 abscisic acid insensitive 8, putative, expressed -
5 Sobic.003G130900 glucosidase II beta subunit-like domain containing protein, expressed K08288: protein kinase C substrate 80K-H
6 Sobic.007G039300 ATP-binding region, ATPase-like domain containing protein, expressed -
7 Sobic.004G257200 phosphatidylinositol transfer, putative, expressed -
8 Sobic.003G389300 cyclin-related protein, putative, expressed -
9 Sobic.001G477700 WD domain, G-beta repeat domain containing protein, expressed K11807: WDTC1, WD and tetratricopeptide repeats protein 1
10 Sobic.004G336100 ribonucleoside-diphosphate reductase large subunit, putative, expressed K10807: ribonucleoside-diphosphate reductase subunit M1
11 Sobic.006G180700 SNF2 family N-terminal domain containing protein, expressed K14439: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1
12 Sobic.001G085700 STE_PAK_Ste20_KHSh_GCKh_HPKh.1 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed -
13 Sobic.005G114500 growth regulator related protein, putative, expressed -
14 Sobic.006G207300 DNA ligase I, ATP-dependent family protein, expressed K10777: LIG4, DNA ligase 4
15 Sobic.005G040900 zinc finger, C3HC4 type domain containing protein, expressed K10601: SYVN1, E3 ubiquitin-protein ligase synoviolin
16 Sobic.003G397100 lysine ketoglutarate reductase trans-splicing related 1, putative, expressed -
17 Sobic.002G297600 DHHC zinc finger domain containing protein, expressed K18932: palmitoyltransferase
18 Sobic.006G112100 expressed protein -
19 Sobic.004G145600 expressed protein -
20 Sobic.009G126000 mannosylglycoprotein endo-beta-mannosidase, putative, expressed K18577: mannosylglycoprotein endo-beta-mannosidase


Gene co-expression network
sample Sobic010G278700 Sobic010G278700 Sobic001G088900 Sobic001G088900 Sobic010G278700--Sobic001G088900 Sobic004G312100 Sobic004G312100 Sobic010G278700--Sobic004G312100 Sobic001G097500 Sobic001G097500 Sobic010G278700--Sobic001G097500 Sobic003G005900 Sobic003G005900 Sobic010G278700--Sobic003G005900 Sobic003G130900 Sobic003G130900 Sobic010G278700--Sobic003G130900 Sobic007G039300 Sobic007G039300 Sobic010G278700--Sobic007G039300 Sobic004G257200 Sobic004G257200 Sobic010G278700--Sobic004G257200 Sobic003G389300 Sobic003G389300 Sobic010G278700--Sobic003G389300 Sobic001G477700 Sobic001G477700 Sobic010G278700--Sobic001G477700 Sobic010G279900 Sobic010G279900 Sobic001G088900--Sobic010G279900 Sobic001G245900 Sobic001G245900 Sobic001G088900--Sobic001G245900 Sobic001G367100 Sobic001G367100 Sobic001G088900--Sobic001G367100 Sobic006G180700 Sobic006G180700 Sobic001G088900--Sobic006G180700 Sobic009G000400 Sobic009G000400 Sobic001G088900--Sobic009G000400 Sobic001G034500 Sobic001G034500 Sobic001G088900--Sobic001G034500 Sobic010G269300 Sobic010G269300 Sobic001G088900--Sobic010G269300 Sobic001G222000 Sobic001G222000 Sobic001G088900--Sobic001G222000 Sobic001G261585 Sobic001G261585 Sobic001G088900--Sobic001G261585 Sobic004G312100--Sobic006G180700 Sobic004G312100--Sobic001G088900 Sobic001G334100 Sobic001G334100 Sobic004G312100--Sobic001G334100 Sobic003G360300 Sobic003G360300 Sobic004G312100--Sobic003G360300 Sobic006G091000 Sobic006G091000 Sobic004G312100--Sobic006G091000 Sobic004G312100--Sobic001G034500 Sobic006G268300 Sobic006G268300 Sobic004G312100--Sobic006G268300 Sobic003G259600 Sobic003G259600 Sobic004G312100--Sobic003G259600 Sobic001G413800 Sobic001G413800 Sobic004G312100--Sobic001G413800 Sobic005G114500 Sobic005G114500 Sobic001G097500--Sobic005G114500 Sobic001G474400 Sobic001G474400 Sobic001G097500--Sobic001G474400 Sobic009G003700 Sobic009G003700 Sobic001G097500--Sobic009G003700 Sobic003G314300 Sobic003G314300 Sobic001G097500--Sobic003G314300 Sobic003G182300 Sobic003G182300 Sobic001G097500--Sobic003G182300 Sobic001G012900 Sobic001G012900 Sobic001G097500--Sobic001G012900 Sobic010G223400 Sobic010G223400 Sobic001G097500--Sobic010G223400 Sobic006G203300 Sobic006G203300 Sobic001G097500--Sobic006G203300 Sobic001G193100 Sobic001G193100 Sobic001G097500--Sobic001G193100 Sobic003G005900--Sobic005G114500 Sobic003G005900--Sobic003G130900 Sobic006G265600 Sobic006G265600 Sobic003G005900--Sobic006G265600 Sobic003G293000 Sobic003G293000 Sobic003G005900--Sobic003G293000 Sobic003G005900--Sobic001G474400 Sobic004G151200 Sobic004G151200 Sobic003G005900--Sobic004G151200 Sobic003G005900--Sobic001G012900 Sobic002G014800 Sobic002G014800 Sobic003G005900--Sobic002G014800 Sobic009G207200 Sobic009G207200 Sobic003G005900--Sobic009G207200 Sobic003G130900--Sobic005G114500 Sobic001G455000 Sobic001G455000 Sobic003G130900--Sobic001G455000 Sobic003G130900--Sobic003G005900 Sobic001G445500 Sobic001G445500 Sobic003G130900--Sobic001G445500 Sobic003G130900--Sobic004G151200 Sobic003G130900--Sobic006G265600 Sobic003G130900--Sobic001G012900 Sobic002G182000 Sobic002G182000 Sobic003G130900--Sobic002G182000 Sobic005G059500 Sobic005G059500 Sobic003G130900--Sobic005G059500 Sobic004G020900 Sobic004G020900 Sobic007G039300--Sobic004G020900 Sobic008G017900 Sobic008G017900 Sobic007G039300--Sobic008G017900 Sobic002G154400 Sobic002G154400 Sobic007G039300--Sobic002G154400 Sobic002G263700 Sobic002G263700 Sobic007G039300--Sobic002G263700 Sobic004G350200 Sobic004G350200 Sobic007G039300--Sobic004G350200 Sobic003G124600 Sobic003G124600 Sobic007G039300--Sobic003G124600 Sobic007G039300--Sobic010G269300 Sobic003G113300 Sobic003G113300 Sobic007G039300--Sobic003G113300 Sobic007G039300--Sobic003G130900 Sobic003G227100 Sobic003G227100 Sobic004G257200--Sobic003G227100 Sobic007G180600 Sobic007G180600 Sobic004G257200--Sobic007G180600 Sobic008G123500 Sobic008G123500 Sobic004G257200--Sobic008G123500 Sobic003G209200 Sobic003G209200 Sobic004G257200--Sobic003G209200 Sobic001G127200 Sobic001G127200 Sobic004G257200--Sobic001G127200 Sobic001G478800 Sobic001G478800 Sobic004G257200--Sobic001G478800 Sobic004G257200--Sobic001G477700 Sobic004G261600 Sobic004G261600 Sobic004G257200--Sobic004G261600 Sobic006G224800 Sobic006G224800 Sobic004G257200--Sobic006G224800 Sobic008G040700 Sobic008G040700 Sobic003G389300--Sobic008G040700 Sobic003G199200 Sobic003G199200 Sobic003G389300--Sobic003G199200 Sobic001G015800 Sobic001G015800 Sobic003G389300--Sobic001G015800 Sobic001G163400 Sobic001G163400 Sobic003G389300--Sobic001G163400 Sobic004G344901 Sobic004G344901 Sobic003G389300--Sobic004G344901 Sobic001G119800 Sobic001G119800 Sobic003G389300--Sobic001G119800 Sobic001G051700 Sobic001G051700 Sobic003G389300--Sobic001G051700 Sobic003G389300--Sobic003G227100 Sobic006G281000 Sobic006G281000 Sobic003G389300--Sobic006G281000 Sobic006G131000 Sobic006G131000 Sobic001G477700--Sobic006G131000 Sobic001G096000 Sobic001G096000 Sobic001G477700--Sobic001G096000 Sobic007G042900 Sobic007G042900 Sobic001G477700--Sobic007G042900 Sobic001G477700--Sobic001G034500 Sobic007G196900 Sobic007G196900 Sobic001G477700--Sobic007G196900 Sobic001G477700--Sobic007G180600 Sobic001G477700--Sobic001G413800 Sobic003G284000 Sobic003G284000 Sobic001G477700--Sobic003G284000 Sobic010G204400 Sobic010G204400 Sobic001G477700--Sobic010G204400
Octagon: transcription factors


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