Gene annotation
Transcriptome id Sobic.010G279200.1
Synonym ATHM4, ATM4, TRX-M4
Functional annotation thioredoxin, putative, expressed
UniProt A0A194YN14
Pfam PF00085
Panther DB PTHR10438 PTHR10438:SF299
NCBI CDD KOG0910; Thioredoxin-like protein
KEGG Orthology K03671; thioredoxin 1
Gene Ontology GO:0015035; protein disulfide oxidoreductase activity GO:0006662glycerol ether metabolic process


Orthologs (automatic annotation)
TAIR AT3G15360 : thioredoxin M-type 4
RAP-DB (Rice) LOC_Os12g08730.1 : thioredoxin, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G096700 POEI30 - Pollen Ole e I allergen and extensin family protein precursor, expressed -
2 Sobic.001G481700 eukaryotic translation initiation factor 3 subunit K, putative, expressed K15028: translation initiation factor 3 subunit K
3 Sobic.009G130400 DNA-directed RNA polymerase II subunit RPB7, putative, expressed K03015: RPB7, DNA-directed RNA polymerase II subunit RPB7
4 Sobic.006G281200 csAtPR5, putative, expressed -
5 Sobic.006G109700 UBA and UBX domain-containing protein, putative, expressed K14012: SHP1, UBX1, UBX domain-containing protein 1
6 Sobic.001G087900 expressed protein -
7 Sobic.001G404100 expressed protein K03237: translation initiation factor 2 subunit 1
8 Sobic.001G428100 S-RNase-binding protein, putative, expressed K19042: E3 ubiquitin-protein ligase BOI and related proteins
9 Sobic.001G005900 PPR repeat domain containing protein, putative, expressed -
10 Sobic.001G364500 peptide methionine sulfoxide reductase msrB, putative, expressed K07305: peptide-methionine (R)-S-oxide reductase
11 Sobic.009G198500 ras-related protein, putative, expressed K07897: Ras-related protein Rab-7A
12 Sobic.002G406200 expressed protein -
13 Sobic.009G011400 rab5-interacting protein like, putative, expressed -
14 Sobic.004G216800 h/ACA ribonucleoprotein complex subunit 3, putative, expressed K11130: NOP10, H/ACA ribonucleoprotein complex subunit 3
15 Sobic.002G050200 expressed protein -
16 Sobic.003G440800 vacuolar protein sorting 55 family protein, putative, expressed -
17 Sobic.001G263000 membrane associated DUF588 domain containing protein, putative, expressed -
18 Sobic.005G191600 OsSigP7 - Putative Type I Signal Peptidase homologue@ employs a putative Ser/Lys catalytic dyad, expressed K09647: mitochondrial inner membrane protease subunit 1
19 Sobic.001G388600 histidine triad family protein, putative, expressed K02503: HINT1, hinT, histidine triad (HIT) family protein
20 Sobic.010G013900 DAG protein, chloroplast precursor, putative, expressed -


Gene co-expression network
sample Sobic010G279200 Sobic010G279200 Sobic007G096700 Sobic007G096700 Sobic010G279200--Sobic007G096700 Sobic001G481700 Sobic001G481700 Sobic010G279200--Sobic001G481700 Sobic009G130400 Sobic009G130400 Sobic010G279200--Sobic009G130400 Sobic006G281200 Sobic006G281200 Sobic010G279200--Sobic006G281200 Sobic006G109700 Sobic006G109700 Sobic010G279200--Sobic006G109700 Sobic001G087900 Sobic001G087900 Sobic010G279200--Sobic001G087900 Sobic001G404100 Sobic001G404100 Sobic010G279200--Sobic001G404100 Sobic001G428100 Sobic001G428100 Sobic010G279200--Sobic001G428100 Sobic001G005900 Sobic001G005900 Sobic010G279200--Sobic001G005900 Sobic009G198500 Sobic009G198500 Sobic007G096700--Sobic009G198500 Sobic004G327300 Sobic004G327300 Sobic007G096700--Sobic004G327300 Sobic009G122100 Sobic009G122100 Sobic007G096700--Sobic009G122100 Sobic001G501200 Sobic001G501200 Sobic007G096700--Sobic001G501200 Sobic007G096700--Sobic001G005900 Sobic002G400000 Sobic002G400000 Sobic007G096700--Sobic002G400000 Sobic004G130900 Sobic004G130900 Sobic007G096700--Sobic004G130900 Sobic001G175800 Sobic001G175800 Sobic007G096700--Sobic001G175800 Sobic004G300900 Sobic004G300900 Sobic007G096700--Sobic004G300900 Sobic001G025600 Sobic001G025600 Sobic001G481700--Sobic001G025600 Sobic004G224900 Sobic004G224900 Sobic001G481700--Sobic004G224900 Sobic010G100000 Sobic010G100000 Sobic001G481700--Sobic010G100000 Sobic002G341800 Sobic002G341800 Sobic001G481700--Sobic002G341800 Sobic001G481700--Sobic001G404100 Sobic007G220900 Sobic007G220900 Sobic001G481700--Sobic007G220900 Sobic009G104100 Sobic009G104100 Sobic001G481700--Sobic009G104100 Sobic001G458700 Sobic001G458700 Sobic001G481700--Sobic001G458700 Sobic007G176200 Sobic007G176200 Sobic001G481700--Sobic007G176200 Sobic009G130400--Sobic001G404100 Sobic001G096100 Sobic001G096100 Sobic009G130400--Sobic001G096100 Sobic009G130400--Sobic006G281200 Sobic008G058300 Sobic008G058300 Sobic009G130400--Sobic008G058300 Sobic010G013900 Sobic010G013900 Sobic009G130400--Sobic010G013900 Sobic003G028100 Sobic003G028100 Sobic009G130400--Sobic003G028100 Sobic001G502200 Sobic001G502200 Sobic009G130400--Sobic001G502200 Sobic009G130400--Sobic002G341800 Sobic004G248900 Sobic004G248900 Sobic009G130400--Sobic004G248900 Sobic006G281200--Sobic001G428100 Sobic003G003000 Sobic003G003000 Sobic006G281200--Sobic003G003000 Sobic006G281200--Sobic001G025600 Sobic009G131100 Sobic009G131100 Sobic006G281200--Sobic009G131100 Sobic007G091000 Sobic007G091000 Sobic006G281200--Sobic007G091000 Sobic006G281200--Sobic001G404100 Sobic008G100000 Sobic008G100000 Sobic006G281200--Sobic008G100000 Sobic003G367900 Sobic003G367900 Sobic006G281200--Sobic003G367900 Sobic006G281200--Sobic009G130400 Sobic008G137600 Sobic008G137600 Sobic006G109700--Sobic008G137600 Sobic001G444300 Sobic001G444300 Sobic006G109700--Sobic001G444300 Sobic006G183000 Sobic006G183000 Sobic006G109700--Sobic006G183000 Sobic001G294900 Sobic001G294900 Sobic006G109700--Sobic001G294900 Sobic009G168000 Sobic009G168000 Sobic006G109700--Sobic009G168000 Sobic006G211800 Sobic006G211800 Sobic006G109700--Sobic006G211800 Sobic006G231500 Sobic006G231500 Sobic006G109700--Sobic006G231500 Sobic004G348900 Sobic004G348900 Sobic006G109700--Sobic004G348900 Sobic006G109700--Sobic001G502200 Sobic004G351500 Sobic004G351500 Sobic001G087900--Sobic004G351500 Sobic001G428200 Sobic001G428200 Sobic001G087900--Sobic001G428200 Sobic001G353600 Sobic001G353600 Sobic001G087900--Sobic001G353600 Sobic001G087900--Sobic009G131100 Sobic001G087900--Sobic009G198500 Sobic004G272300 Sobic004G272300 Sobic001G087900--Sobic004G272300 Sobic004G026400 Sobic004G026400 Sobic001G087900--Sobic004G026400 Sobic001G095632 Sobic001G095632 Sobic001G087900--Sobic001G095632 Sobic001G034700 Sobic001G034700 Sobic001G087900--Sobic001G034700 Sobic001G404100--Sobic002G341800 Sobic001G404100--Sobic001G481700 Sobic001G404100--Sobic001G502200 Sobic001G404100--Sobic008G137600 Sobic009G104000 Sobic009G104000 Sobic001G404100--Sobic009G104000 Sobic001G404100--Sobic001G096100 Sobic002G428200 Sobic002G428200 Sobic001G404100--Sobic002G428200 Sobic009G212300 Sobic009G212300 Sobic001G404100--Sobic009G212300 Sobic006G252200 Sobic006G252200 Sobic001G404100--Sobic006G252200 Sobic001G428100--Sobic006G281200 Sobic001G428100--Sobic001G502200 Sobic001G428100--Sobic001G501200 Sobic004G060600 Sobic004G060600 Sobic001G428100--Sobic004G060600 Sobic001G428100--Sobic009G198500 Sobic009G004600 Sobic009G004600 Sobic001G428100--Sobic009G004600 Sobic003G440800 Sobic003G440800 Sobic001G428100--Sobic003G440800 Sobic001G315500 Sobic001G315500 Sobic001G428100--Sobic001G315500 Sobic003G117300 Sobic003G117300 Sobic001G428100--Sobic003G117300 Sobic001G005900--Sobic009G198500 Sobic001G005900--Sobic004G327300 Sobic001G005900--Sobic004G300900 Sobic001G048832 Sobic001G048832 Sobic001G005900--Sobic001G048832 Sobic002G078400 Sobic002G078400 Sobic001G005900--Sobic002G078400 Sobic001G005900--Sobic001G502200 Sobic001G005900--Sobic004G130900 Sobic001G005900--Sobic007G096700 Sobic001G005900--Sobic001G501200
Octagon: transcription factors


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