Gene annotation
Transcriptome id Sobic.001G059200.2,Sobic.001G059200.1
Synonym Sb01g005380
Functional annotation OsFBX171 - F-box domain containing protein, expressed
UniProt A0A1Z5S4G7 , A0A1Z5S4J5
Pfam PF00646
Panther DB PTHR32212 PTHR32212:SF73
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT3G49030 : FBD, F-box and Leucine Rich Repeat domains containing protein
RAP-DB (Rice) LOC_Os01g46500.1 : OsFBX21 - F-box domain containing protein, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G099200 expressed protein -
2 Sobic.002G368700 OsMADS18 - MADS-box family gene with MIKCc type-box, expressed -
3 Sobic.005G126600 OsFBL55 - F-box domain and LRR containing protein, expressed -
4 Sobic.010G226000 expressed protein -
5 Sobic.007G223000 hypothetical protein -
6 Sobic.005G201000 -(PubMedID : 29751546)@transporter, monovalent cation:proton antiporter-2 family, putative, expressed -
7 Sobic.005G143900 regulator of chromosome condensation, putative, expressed -
8 Sobic.002G211800 AT-rich interaction region, putative, expressed -
9 Sobic.001G128300 chloride channel protein CLC-d, putative, expressed K05016: chloride channel 7
10 Sobic.001G310100 WD domain, G-beta repeat domain containing protein, expressed K11804: DDB1- and CUL4-associated factor 8
11 Sobic.003G362600 AT hook motif family protein, expressed K15200: general transcription factor 3C polypeptide 2
12 Sobic.003G150100 expressed protein -
13 Sobic.002G169400 Leucine Rich Repeat family protein, expressed -
14 Sobic.003G119700 zinc finger, C3HC4 type domain containing protein, expressed -
15 Sobic.003G298600 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf and root"(PubMedID : 20499123)@auxin response factor, putative, expressed -
16 Sobic.003G221900 helix-loop-helix DNA-binding domain containing protein, expressed -
17 Sobic.002G370200 agenet domain-containing protein, putative, expressed -
18 Sobic.007G031900 OsFBX207 - F-box domain containing protein, expressed -
19 Sobic.003G316500 expressed protein -
20 Sobic.003G309200 expressed protein K12617: PATL1, DNA topoisomerase 2-associated protein PAT1


Gene co-expression network
sample Sobic001G059200 Sobic001G059200 Sobic007G099200 Sobic007G099200 Sobic001G059200--Sobic007G099200 Sobic002G368700 Sobic002G368700 Sobic001G059200--Sobic002G368700 Sobic005G126600 Sobic005G126600 Sobic001G059200--Sobic005G126600 Sobic010G226000 Sobic010G226000 Sobic001G059200--Sobic010G226000 Sobic007G223000 Sobic007G223000 Sobic001G059200--Sobic007G223000 Sobic005G201000 Sobic005G201000 Sobic001G059200--Sobic005G201000 Sobic005G143900 Sobic005G143900 Sobic001G059200--Sobic005G143900 Sobic002G211800 Sobic002G211800 Sobic001G059200--Sobic002G211800 Sobic001G128300 Sobic001G128300 Sobic001G059200--Sobic001G128300 Sobic003G119700 Sobic003G119700 Sobic007G099200--Sobic003G119700 Sobic001G310100 Sobic001G310100 Sobic007G099200--Sobic001G310100 Sobic007G099200--Sobic007G223000 Sobic009G066900 Sobic009G066900 Sobic007G099200--Sobic009G066900 Sobic010G014100 Sobic010G014100 Sobic007G099200--Sobic010G014100 Sobic008G124900 Sobic008G124900 Sobic007G099200--Sobic008G124900 Sobic007G099200--Sobic001G059200 Sobic003G150100 Sobic003G150100 Sobic007G099200--Sobic003G150100 Sobic002G358400 Sobic002G358400 Sobic007G099200--Sobic002G358400 Sobic009G069300 Sobic009G069300 Sobic002G368700--Sobic009G069300 Sobic002G368700--Sobic001G059200 Sobic001G174800 Sobic001G174800 Sobic002G368700--Sobic001G174800 Sobic005G150350 Sobic005G150350 Sobic002G368700--Sobic005G150350 Sobic009G120600 Sobic009G120600 Sobic002G368700--Sobic009G120600 Sobic002G368700--Sobic007G099200 Sobic002G368700--Sobic001G310100 Sobic003G403300 Sobic003G403300 Sobic002G368700--Sobic003G403300 Sobic003G107500 Sobic003G107500 Sobic002G368700--Sobic003G107500 Sobic010G278200 Sobic010G278200 Sobic005G126600--Sobic010G278200 Sobic003G316500 Sobic003G316500 Sobic005G126600--Sobic003G316500 Sobic002G045600 Sobic002G045600 Sobic005G126600--Sobic002G045600 Sobic010G147100 Sobic010G147100 Sobic005G126600--Sobic010G147100 Sobic001G050200 Sobic001G050200 Sobic005G126600--Sobic001G050200 Sobic005G100700 Sobic005G100700 Sobic005G126600--Sobic005G100700 Sobic003G372500 Sobic003G372500 Sobic005G126600--Sobic003G372500 Sobic003G221900 Sobic003G221900 Sobic005G126600--Sobic003G221900 Sobic004G200200 Sobic004G200200 Sobic005G126600--Sobic004G200200 Sobic001G451400 Sobic001G451400 Sobic010G226000--Sobic001G451400 Sobic009G256400 Sobic009G256400 Sobic010G226000--Sobic009G256400 Sobic004G209700 Sobic004G209700 Sobic010G226000--Sobic004G209700 Sobic009G165700 Sobic009G165700 Sobic010G226000--Sobic009G165700 Sobic003G166750 Sobic003G166750 Sobic010G226000--Sobic003G166750 Sobic001G441400 Sobic001G441400 Sobic010G226000--Sobic001G441400 Sobic001G457800 Sobic001G457800 Sobic010G226000--Sobic001G457800 Sobic001G111850 Sobic001G111850 Sobic010G226000--Sobic001G111850 Sobic003G444800 Sobic003G444800 Sobic010G226000--Sobic003G444800 Sobic002G257750 Sobic002G257750 Sobic007G223000--Sobic002G257750 Sobic003G398700 Sobic003G398700 Sobic007G223000--Sobic003G398700 Sobic007G223000--Sobic005G100700 Sobic007G223000--Sobic003G221900 Sobic008G054000 Sobic008G054000 Sobic007G223000--Sobic008G054000 Sobic010G132600 Sobic010G132600 Sobic007G223000--Sobic010G132600 Sobic002G344000 Sobic002G344000 Sobic007G223000--Sobic002G344000 Sobic007G223000--Sobic002G211800 Sobic010G021500 Sobic010G021500 Sobic007G223000--Sobic010G021500 Sobic003G029500 Sobic003G029500 Sobic005G201000--Sobic003G029500 Sobic005G132000 Sobic005G132000 Sobic005G201000--Sobic005G132000 Sobic009G040400 Sobic009G040400 Sobic005G201000--Sobic009G040400 Sobic006G051800 Sobic006G051800 Sobic005G201000--Sobic006G051800 Sobic007G010800 Sobic007G010800 Sobic005G201000--Sobic007G010800 Sobic010G150100 Sobic010G150100 Sobic005G201000--Sobic010G150100 Sobic010G092350 Sobic010G092350 Sobic005G201000--Sobic010G092350 Sobic003G057233 Sobic003G057233 Sobic005G201000--Sobic003G057233 Sobic001G298900 Sobic001G298900 Sobic005G201000--Sobic001G298900 Sobic010G223700 Sobic010G223700 Sobic005G143900--Sobic010G223700 Sobic006G251000 Sobic006G251000 Sobic005G143900--Sobic006G251000 Sobic006G264000 Sobic006G264000 Sobic005G143900--Sobic006G264000 Sobic003G362600 Sobic003G362600 Sobic005G143900--Sobic003G362600 Sobic005G143900--Sobic010G226000 Sobic010G076300 Sobic010G076300 Sobic005G143900--Sobic010G076300 Sobic006G101800 Sobic006G101800 Sobic005G143900--Sobic006G101800 Sobic002G048700 Sobic002G048700 Sobic005G143900--Sobic002G048700 Sobic001G251200 Sobic001G251200 Sobic005G143900--Sobic001G251200 Sobic002G211800--Sobic009G165700 Sobic007G031900 Sobic007G031900 Sobic002G211800--Sobic007G031900 Sobic002G211800--Sobic002G344000 Sobic002G211800--Sobic003G166750 Sobic004G023000 Sobic004G023000 Sobic002G211800--Sobic004G023000 Sobic009G132700 Sobic009G132700 Sobic002G211800--Sobic009G132700 Sobic003G170900 Sobic003G170900 Sobic002G211800--Sobic003G170900 Sobic002G294800 Sobic002G294800 Sobic002G211800--Sobic002G294800 Sobic002G211800--Sobic003G362600 Sobic001G128300--Sobic009G165700 Sobic001G128300--Sobic001G451400 Sobic001G128300--Sobic001G251200 Sobic004G091100 Sobic004G091100 Sobic001G128300--Sobic004G091100 Sobic001G043100 Sobic001G043100 Sobic001G128300--Sobic001G043100 Sobic009G109925 Sobic009G109925 Sobic001G128300--Sobic009G109925 Sobic003G198800 Sobic003G198800 Sobic001G128300--Sobic003G198800 Sobic001G128300--Sobic001G441400 Sobic001G128300--Sobic002G211800
Octagon: transcription factors


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