Gene annotation
Transcriptome id Sobic.002G370200.1
Synonym Sb02g038900
Functional annotation agenet domain-containing protein, putative, expressed
UniProt C5XDY0
Pfam PF05641
Panther DB PTHR31917 PTHR31917:SF3
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G55600 : agenet domain-containing protein / bromo-adjacent homology (BAH) domain-containing protein
RAP-DB (Rice) LOC_Os07g41640.1 : agenet domain-containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a048714
Brachypodium KQK15307
Barley HORVU2Hr1G032250.4 , HORVU2Hr1G032250.5 , HORVU2Hr1G032250.6 , HORVU2Hr1G032250.1 , HORVU2Hr1G032250.2 , HORVU2Hr1G032250.3
Wheat TraesCS2B02G199500 , TraesCS2B02G199500 , TraesCS2B02G199500 , TraesCS2D02G180400 , TraesCS2D02G180400 , TraesCS2A02G173300 , TraesCS2A02G173300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G165700 SAC3/GANP family protein, putative, expressed -
2 Sobic.003G196300 DNA binding protein, putative, expressed -
3 Sobic.001G534700 plus-3 domain containing protein, putative, expressed -
4 Sobic.003G316500 expressed protein -
5 Sobic.001G128300 chloride channel protein CLC-d, putative, expressed K05016: chloride channel 7
6 Sobic.010G247800 zinc finger, C3HC4 type domain containing protein, expressed K10696: E3 ubiquitin-protein ligase BRE1
7 Sobic.002G042600 ubiquitin carboxyl-terminal hydrolase, putative, expressed K11838: USP7, ubiquitin carboxyl-terminal hydrolase 7
8 Sobic.003G362600 AT hook motif family protein, expressed K15200: general transcription factor 3C polypeptide 2
9 Sobic.001G043100 EMB1745, putative, expressed K18723: nucleoporin GLE1
10 Sobic.003G166750 - K15188: cyclin T
11 Sobic.010G009200 AMP-binding enzyme family protein, expressed K00142: acyl-CoA synthetase
12 Sobic.002G383600 zinc finger, C3HC4 type domain containing protein, expressed K12169: KPC1, Kip1 ubiquitination-promoting complex protein 1
13 Sobic.008G132600 expressed protein -
14 Sobic.004G091100 nuclear protein ZAP-related, putative, expressed K17602: YLP motif-containing protein 1
15 Sobic.010G206900 transcription initiation factor TFIID subunit 1, putative, expressed K03125: transcription initiation factor TFIID subunit 1
16 Sobic.009G074400 CK1_CaseinKinase_1a.5 - CK1 includes the casein kinase 1 kinases, expressed -
17 Sobic.001G370900 expressed protein K11665: INO80, DNA helicase INO80
18 Sobic.003G422500 expressed protein -
19 Sobic.001G289800 BAH domain containing protein, putative, expressed -
20 Sobic.008G087866 - -


Gene co-expression network
sample Sobic002G370200 Sobic002G370200 Sobic009G165700 Sobic009G165700 Sobic002G370200--Sobic009G165700 Sobic003G196300 Sobic003G196300 Sobic002G370200--Sobic003G196300 Sobic001G534700 Sobic001G534700 Sobic002G370200--Sobic001G534700 Sobic003G316500 Sobic003G316500 Sobic002G370200--Sobic003G316500 Sobic001G128300 Sobic001G128300 Sobic002G370200--Sobic001G128300 Sobic010G247800 Sobic010G247800 Sobic002G370200--Sobic010G247800 Sobic002G042600 Sobic002G042600 Sobic002G370200--Sobic002G042600 Sobic003G362600 Sobic003G362600 Sobic002G370200--Sobic003G362600 Sobic001G043100 Sobic001G043100 Sobic002G370200--Sobic001G043100 Sobic003G422500 Sobic003G422500 Sobic009G165700--Sobic003G422500 Sobic009G165700--Sobic010G247800 Sobic010G206900 Sobic010G206900 Sobic009G165700--Sobic010G206900 Sobic003G166750 Sobic003G166750 Sobic009G165700--Sobic003G166750 Sobic008G087866 Sobic008G087866 Sobic009G165700--Sobic008G087866 Sobic001G451400 Sobic001G451400 Sobic009G165700--Sobic001G451400 Sobic003G170900 Sobic003G170900 Sobic009G165700--Sobic003G170900 Sobic009G165700--Sobic001G534700 Sobic008G001200 Sobic008G001200 Sobic009G165700--Sobic008G001200 Sobic003G196300--Sobic010G206900 Sobic004G034900 Sobic004G034900 Sobic003G196300--Sobic004G034900 Sobic001G194200 Sobic001G194200 Sobic003G196300--Sobic001G194200 Sobic007G063000 Sobic007G063000 Sobic003G196300--Sobic007G063000 Sobic001G289800 Sobic001G289800 Sobic003G196300--Sobic001G289800 Sobic004G276400 Sobic004G276400 Sobic003G196300--Sobic004G276400 Sobic003G196300--Sobic010G247800 Sobic009G256300 Sobic009G256300 Sobic003G196300--Sobic009G256300 Sobic003G196300--Sobic001G534700 Sobic001G534700--Sobic010G206900 Sobic001G365900 Sobic001G365900 Sobic001G534700--Sobic001G365900 Sobic002G411600 Sobic002G411600 Sobic001G534700--Sobic002G411600 Sobic001G534700--Sobic003G316500 Sobic001G534700--Sobic009G165700 Sobic001G534700--Sobic004G034900 Sobic002G008900 Sobic002G008900 Sobic001G534700--Sobic002G008900 Sobic001G534700--Sobic003G422500 Sobic001G534700--Sobic008G001200 Sobic003G316500--Sobic001G534700 Sobic009G053900 Sobic009G053900 Sobic003G316500--Sobic009G053900 Sobic009G074400 Sobic009G074400 Sobic003G316500--Sobic009G074400 Sobic001G389100 Sobic001G389100 Sobic003G316500--Sobic001G389100 Sobic010G147100 Sobic010G147100 Sobic003G316500--Sobic010G147100 Sobic003G316500--Sobic001G365900 Sobic003G316500--Sobic009G165700 Sobic003G316500--Sobic001G451400 Sobic003G316500--Sobic010G206900 Sobic001G128300--Sobic009G165700 Sobic001G128300--Sobic001G451400 Sobic001G251200 Sobic001G251200 Sobic001G128300--Sobic001G251200 Sobic004G091100 Sobic004G091100 Sobic001G128300--Sobic004G091100 Sobic001G128300--Sobic001G043100 Sobic009G109925 Sobic009G109925 Sobic001G128300--Sobic009G109925 Sobic003G198800 Sobic003G198800 Sobic001G128300--Sobic003G198800 Sobic001G441400 Sobic001G441400 Sobic001G128300--Sobic001G441400 Sobic002G211800 Sobic002G211800 Sobic001G128300--Sobic002G211800 Sobic010G247800--Sobic010G206900 Sobic010G247800--Sobic009G165700 Sobic010G247800--Sobic002G411600 Sobic010G247800--Sobic003G422500 Sobic009G191000 Sobic009G191000 Sobic010G247800--Sobic009G191000 Sobic001G002000 Sobic001G002000 Sobic010G247800--Sobic001G002000 Sobic001G363500 Sobic001G363500 Sobic010G247800--Sobic001G363500 Sobic004G291900 Sobic004G291900 Sobic010G247800--Sobic004G291900 Sobic002G405800 Sobic002G405800 Sobic010G247800--Sobic002G405800 Sobic001G065100 Sobic001G065100 Sobic002G042600--Sobic001G065100 Sobic006G184900 Sobic006G184900 Sobic002G042600--Sobic006G184900 Sobic008G098900 Sobic008G098900 Sobic002G042600--Sobic008G098900 Sobic002G401500 Sobic002G401500 Sobic002G042600--Sobic002G401500 Sobic002G179400 Sobic002G179400 Sobic002G042600--Sobic002G179400 Sobic004G322400 Sobic004G322400 Sobic002G042600--Sobic004G322400 Sobic002G429300 Sobic002G429300 Sobic002G042600--Sobic002G429300 Sobic008G088872 Sobic008G088872 Sobic002G042600--Sobic008G088872 Sobic001G370900 Sobic001G370900 Sobic002G042600--Sobic001G370900 Sobic003G362600--Sobic009G165700 Sobic003G362600--Sobic001G251200 Sobic003G362600--Sobic003G166750 Sobic003G362600--Sobic002G211800 Sobic003G362600--Sobic008G087866 Sobic004G023000 Sobic004G023000 Sobic003G362600--Sobic004G023000 Sobic003G093800 Sobic003G093800 Sobic003G362600--Sobic003G093800 Sobic003G362600--Sobic004G091100 Sobic003G362600--Sobic001G441400 Sobic001G043100--Sobic009G165700 Sobic001G043100--Sobic001G451400 Sobic001G043100--Sobic003G422500 Sobic001G043100--Sobic001G128300 Sobic001G043100--Sobic003G196300 Sobic003G101400 Sobic003G101400 Sobic001G043100--Sobic003G101400 Sobic006G131000 Sobic006G131000 Sobic001G043100--Sobic006G131000 Sobic004G004300 Sobic004G004300 Sobic001G043100--Sobic004G004300 Sobic001G043100--Sobic008G087866
Octagon: transcription factors


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