Gene annotation
Transcriptome id Sobic.001G066400.1
Synonym
Functional annotation -
UniProt A0A1B6QHL2
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) Zm00025a008464
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G011300 GIY-YIG catalytic domain containing protein, putative, expressed K15078: structure-specific endonuclease subunit SLX1
2 Sobic.001G063800 ML domain protein, putative, expressed -
3 Sobic.001G495400 PPR repeat domain containing protein, putative, expressed -
4 Sobic.002G098900 phospholipase D, putative, expressed K01115: phospholipase D1/2
5 Sobic.008G018700 expressed protein -
6 Sobic.006G170900 growth regulator related protein, putative, expressed -
7 Sobic.008G116700 expressed protein -
8 Sobic.001G376150 - -
9 Sobic.008G069300 - -
10 Sobic.004G056800 DEFL1 - Defensin and Defensin-like DEFL family, expressed -
11 Sobic.007G097800 - -
12 Sobic.006G046100 ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed -
13 Sobic.010G034600 zinc finger, C3HC4 type domain containing protein, expressed -
14 Sobic.008G030600 similar to Non-specific lipid-transfer protein(PubMedID : 29862293)@SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Protease inhibitor/seed storage/LTP("PubMedID : 26759170,PubMedID : 24597475")@LTPL14 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
15 Sobic.003G258200 AMP-binding enzyme, putative, expressed K01897: ACSL, long-chain acyl-CoA synthetase
16 Sobic.007G221500 expressed protein -
17 Sobic.009G034500 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf, stem and root, expression induced by IAA treatment"(PubMedID : 20528920)@MDR-like ABC transporter, putative, expressed K05658: ABCB1, ATP-binding cassette, subfamily B (MDR/TAP), member 1
18 Sobic.001G032200 transporter, major facilitator superfamily domain containing protein, expressed -
19 Sobic.010G231800 ribosomal protein, putative, expressed -
20 Sobic.003G421000 - -


Gene co-expression network
sample Sobic001G066400 Sobic001G066400 Sobic008G011300 Sobic008G011300 Sobic001G066400--Sobic008G011300 Sobic001G063800 Sobic001G063800 Sobic001G066400--Sobic001G063800 Sobic001G495400 Sobic001G495400 Sobic001G066400--Sobic001G495400 Sobic002G098900 Sobic002G098900 Sobic001G066400--Sobic002G098900 Sobic008G018700 Sobic008G018700 Sobic001G066400--Sobic008G018700 Sobic006G170900 Sobic006G170900 Sobic001G066400--Sobic006G170900 Sobic008G116700 Sobic008G116700 Sobic001G066400--Sobic008G116700 Sobic001G376150 Sobic001G376150 Sobic001G066400--Sobic001G376150 Sobic008G069300 Sobic008G069300 Sobic001G066400--Sobic008G069300 Sobic001G032200 Sobic001G032200 Sobic008G011300--Sobic001G032200 Sobic007G211800 Sobic007G211800 Sobic008G011300--Sobic007G211800 Sobic010G204900 Sobic010G204900 Sobic008G011300--Sobic010G204900 Sobic001G478600 Sobic001G478600 Sobic008G011300--Sobic001G478600 Sobic008G011300--Sobic001G063800 Sobic008G011300--Sobic001G495400 Sobic010G221600 Sobic010G221600 Sobic008G011300--Sobic010G221600 Sobic002G189600 Sobic002G189600 Sobic008G011300--Sobic002G189600 Sobic002G388000 Sobic002G388000 Sobic008G011300--Sobic002G388000 Sobic004G175600 Sobic004G175600 Sobic001G063800--Sobic004G175600 Sobic001G063800--Sobic008G011300 Sobic003G218801 Sobic003G218801 Sobic001G063800--Sobic003G218801 Sobic001G296400 Sobic001G296400 Sobic001G063800--Sobic001G296400 Sobic001G063800--Sobic010G204900 Sobic001G250700 Sobic001G250700 Sobic001G063800--Sobic001G250700 Sobic003G265500 Sobic003G265500 Sobic001G063800--Sobic003G265500 Sobic001G063800--Sobic001G032200 Sobic002G072300 Sobic002G072300 Sobic001G063800--Sobic002G072300 Sobic004G097900 Sobic004G097900 Sobic001G495400--Sobic004G097900 Sobic002G386900 Sobic002G386900 Sobic001G495400--Sobic002G386900 Sobic002G292800 Sobic002G292800 Sobic001G495400--Sobic002G292800 Sobic001G495400--Sobic001G032200 Sobic001G495400--Sobic006G170900 Sobic002G122100 Sobic002G122100 Sobic001G495400--Sobic002G122100 Sobic004G106250 Sobic004G106250 Sobic001G495400--Sobic004G106250 Sobic001G417500 Sobic001G417500 Sobic001G495400--Sobic001G417500 Sobic003G124600 Sobic003G124600 Sobic001G495400--Sobic003G124600 Sobic003G403300 Sobic003G403300 Sobic002G098900--Sobic003G403300 Sobic002G407000 Sobic002G407000 Sobic002G098900--Sobic002G407000 Sobic001G067700 Sobic001G067700 Sobic002G098900--Sobic001G067700 Sobic001G198400 Sobic001G198400 Sobic002G098900--Sobic001G198400 Sobic002G376600 Sobic002G376600 Sobic002G098900--Sobic002G376600 Sobic003G092800 Sobic003G092800 Sobic002G098900--Sobic003G092800 Sobic002G098900--Sobic008G069300 Sobic003G198900 Sobic003G198900 Sobic002G098900--Sobic003G198900 Sobic003G134300 Sobic003G134300 Sobic002G098900--Sobic003G134300 Sobic004G056800 Sobic004G056800 Sobic008G018700--Sobic004G056800 Sobic010G109800 Sobic010G109800 Sobic008G018700--Sobic010G109800 Sobic003G421000 Sobic003G421000 Sobic008G018700--Sobic003G421000 Sobic002G095600 Sobic002G095600 Sobic008G018700--Sobic002G095600 Sobic007G226500 Sobic007G226500 Sobic008G018700--Sobic007G226500 Sobic006G079800 Sobic006G079800 Sobic008G018700--Sobic006G079800 Sobic008G018700--Sobic001G067700 Sobic001G257200 Sobic001G257200 Sobic008G018700--Sobic001G257200 Sobic001G307500 Sobic001G307500 Sobic008G018700--Sobic001G307500 Sobic005G123400 Sobic005G123400 Sobic006G170900--Sobic005G123400 Sobic006G170900--Sobic003G124600 Sobic003G113300 Sobic003G113300 Sobic006G170900--Sobic003G113300 Sobic007G034200 Sobic007G034200 Sobic006G170900--Sobic007G034200 Sobic006G103700 Sobic006G103700 Sobic006G170900--Sobic006G103700 Sobic006G170900--Sobic002G292800 Sobic003G194800 Sobic003G194800 Sobic006G170900--Sobic003G194800 Sobic006G170900--Sobic004G106250 Sobic006G237500 Sobic006G237500 Sobic006G170900--Sobic006G237500 Sobic007G087000 Sobic007G087000 Sobic008G116700--Sobic007G087000 Sobic002G200000 Sobic002G200000 Sobic008G116700--Sobic002G200000 Sobic001G114200 Sobic001G114200 Sobic008G116700--Sobic001G114200 Sobic002G079000 Sobic002G079000 Sobic008G116700--Sobic002G079000 Sobic002G076500 Sobic002G076500 Sobic008G116700--Sobic002G076500 Sobic009G107300 Sobic009G107300 Sobic008G116700--Sobic009G107300 Sobic007G076400 Sobic007G076400 Sobic008G116700--Sobic007G076400 Sobic008G116700--Sobic008G069300 Sobic004G198600 Sobic004G198600 Sobic008G116700--Sobic004G198600 Sobic001G376150--Sobic008G018700 Sobic001G376150--Sobic001G067700 Sobic001G376150--Sobic004G056800 Sobic006G008700 Sobic006G008700 Sobic001G376150--Sobic006G008700 Sobic010G034600 Sobic010G034600 Sobic001G376150--Sobic010G034600 Sobic004G165400 Sobic004G165400 Sobic001G376150--Sobic004G165400 Sobic007G113500 Sobic007G113500 Sobic001G376150--Sobic007G113500 Sobic005G116100 Sobic005G116100 Sobic001G376150--Sobic005G116100 Sobic008G119250 Sobic008G119250 Sobic001G376150--Sobic008G119250 Sobic009G046900 Sobic009G046900 Sobic008G069300--Sobic009G046900 Sobic002G074800 Sobic002G074800 Sobic008G069300--Sobic002G074800 Sobic003G428000 Sobic003G428000 Sobic008G069300--Sobic003G428000 Sobic009G148600 Sobic009G148600 Sobic008G069300--Sobic009G148600 Sobic008G069300--Sobic010G109800 Sobic009G229400 Sobic009G229400 Sobic008G069300--Sobic009G229400 Sobic008G069300--Sobic003G198900 Sobic009G156800 Sobic009G156800 Sobic008G069300--Sobic009G156800 Sobic006G270000 Sobic006G270000 Sobic008G069300--Sobic006G270000
Octagon: transcription factors


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