Gene annotation
Transcriptome id Sobic.001G105300.1
Synonym Sb01g009410
Functional annotation GA15368-PA, putative, expressed
UniProt C5WM08
Pfam -
Panther DB PTHR21521 PTHR21521:SF0
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G12210 : DNA binding
RAP-DB (Rice) LOC_Os03g51880.1 : GA15368-PA, putative, expressed
MaizeGDB (Corn) Zm00025a016891
Brachypodium KQK13411
Barley HORVU4Hr1G009950.7 , HORVU4Hr1G009950.6 , HORVU4Hr1G009950.5 , HORVU4Hr1G009950.4 , HORVU4Hr1G009950.3 , HORVU4Hr1G009950.2 , HORVU4Hr1G009950.1
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G375100 snRK1-interacting protein 1, putative, expressed -
2 Sobic.010G067000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
3 Sobic.003G276500 outer mitochondrial membrane porin, putative, expressed K15040: voltage-dependent anion channel protein 2
4 Sobic.009G042500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
5 Sobic.002G136600 expressed protein -
6 Sobic.009G214000 expressed protein -
7 Sobic.003G128700 flavin monooxygenase, putative, expressed -
8 Sobic.010G085000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
9 Sobic.004G252100 ribosomal protein L7Ae, putative, expressed K11129: NHP2, H/ACA ribonucleoprotein complex subunit 2
10 Sobic.007G059400 transferase family protein, putative, expressed -
11 Sobic.009G148700 amidophosphoribosyltransferase, chloroplast precursor, putative, expressed K00764: purF, amidophosphoribosyltransferase
12 Sobic.010G101100 E2F family transcription factor protein, putative, expressed -
13 Sobic.007G024500 zinc finger family protein, putative, expressed -
14 Sobic.001G108800 expressed protein -
15 Sobic.009G080300 uncharacterized protein KIAA1310, putative, expressed K07020: uncharacterized protein
16 Sobic.003G300900 AAA-type ATPase family protein, putative, expressed K07767: katanin p60 ATPase-containing subunit A1
17 Sobic.001G397000 argininosuccinate lyase, putative, expressed K01755: argH, argininosuccinate lyase
18 Sobic.001G368800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@diphthine synthase, putative, expressed K00586: diphthine methyl ester synthase
19 Sobic.004G028400 SWIB/MDM2 domain containing protein, expressed -
20 Sobic.001G363000 uncharacterized protein HI0077, putative, expressed -


Gene co-expression network
sample Sobic001G105300 Sobic001G105300 Sobic003G375100 Sobic003G375100 Sobic001G105300--Sobic003G375100 Sobic010G067000 Sobic010G067000 Sobic001G105300--Sobic010G067000 Sobic003G276500 Sobic003G276500 Sobic001G105300--Sobic003G276500 Sobic009G042500 Sobic009G042500 Sobic001G105300--Sobic009G042500 Sobic002G136600 Sobic002G136600 Sobic001G105300--Sobic002G136600 Sobic009G214000 Sobic009G214000 Sobic001G105300--Sobic009G214000 Sobic003G128700 Sobic003G128700 Sobic001G105300--Sobic003G128700 Sobic010G085000 Sobic010G085000 Sobic001G105300--Sobic010G085000 Sobic004G252100 Sobic004G252100 Sobic001G105300--Sobic004G252100 Sobic003G375100--Sobic002G136600 Sobic003G375100--Sobic003G276500 Sobic010G054300 Sobic010G054300 Sobic003G375100--Sobic010G054300 Sobic010G082850 Sobic010G082850 Sobic003G375100--Sobic010G082850 Sobic003G375100--Sobic004G252100 Sobic002G074200 Sobic002G074200 Sobic003G375100--Sobic002G074200 Sobic003G289601 Sobic003G289601 Sobic003G375100--Sobic003G289601 Sobic003G310600 Sobic003G310600 Sobic003G375100--Sobic003G310600 Sobic001G162800 Sobic001G162800 Sobic003G375100--Sobic001G162800 Sobic001G200600 Sobic001G200600 Sobic010G067000--Sobic001G200600 Sobic003G433600 Sobic003G433600 Sobic010G067000--Sobic003G433600 Sobic008G009300 Sobic008G009300 Sobic010G067000--Sobic008G009300 Sobic007G179500 Sobic007G179500 Sobic010G067000--Sobic007G179500 Sobic004G250100 Sobic004G250100 Sobic010G067000--Sobic004G250100 Sobic010G067000--Sobic009G042500 Sobic002G111700 Sobic002G111700 Sobic010G067000--Sobic002G111700 Sobic003G203100 Sobic003G203100 Sobic010G067000--Sobic003G203100 Sobic009G226000 Sobic009G226000 Sobic010G067000--Sobic009G226000 Sobic003G276500--Sobic003G375100 Sobic003G276500--Sobic002G136600 Sobic010G101100 Sobic010G101100 Sobic003G276500--Sobic010G101100 Sobic003G125332 Sobic003G125332 Sobic003G276500--Sobic003G125332 Sobic003G276500--Sobic002G074200 Sobic003G276500--Sobic009G042500 Sobic001G296000 Sobic001G296000 Sobic003G276500--Sobic001G296000 Sobic009G080300 Sobic009G080300 Sobic003G276500--Sobic009G080300 Sobic003G276500--Sobic010G085000 Sobic003G202700 Sobic003G202700 Sobic009G042500--Sobic003G202700 Sobic009G042500--Sobic001G200600 Sobic009G042500--Sobic003G433600 Sobic006G266000 Sobic006G266000 Sobic009G042500--Sobic006G266000 Sobic001G226200 Sobic001G226200 Sobic009G042500--Sobic001G226200 Sobic009G042500--Sobic010G067000 Sobic009G042500--Sobic004G250100 Sobic010G066900 Sobic010G066900 Sobic009G042500--Sobic010G066900 Sobic002G292400 Sobic002G292400 Sobic009G042500--Sobic002G292400 Sobic002G136600--Sobic002G074200 Sobic002G136600--Sobic003G375100 Sobic004G170500 Sobic004G170500 Sobic002G136600--Sobic004G170500 Sobic002G136600--Sobic004G252100 Sobic001G529400 Sobic001G529400 Sobic002G136600--Sobic001G529400 Sobic002G136600--Sobic003G125332 Sobic002G136600--Sobic003G276500 Sobic007G195800 Sobic007G195800 Sobic002G136600--Sobic007G195800 Sobic002G136600--Sobic010G101100 Sobic009G012000 Sobic009G012000 Sobic009G214000--Sobic009G012000 Sobic001G341300 Sobic001G341300 Sobic009G214000--Sobic001G341300 Sobic004G152400 Sobic004G152400 Sobic009G214000--Sobic004G152400 Sobic009G011901 Sobic009G011901 Sobic009G214000--Sobic009G011901 Sobic001G354000 Sobic001G354000 Sobic009G214000--Sobic001G354000 Sobic003G107400 Sobic003G107400 Sobic009G214000--Sobic003G107400 Sobic004G152700 Sobic004G152700 Sobic009G214000--Sobic004G152700 Sobic006G159400 Sobic006G159400 Sobic009G214000--Sobic006G159400 Sobic002G119800 Sobic002G119800 Sobic009G214000--Sobic002G119800 Sobic003G300900 Sobic003G300900 Sobic003G128700--Sobic003G300900 Sobic006G245500 Sobic006G245500 Sobic003G128700--Sobic006G245500 Sobic008G170500 Sobic008G170500 Sobic003G128700--Sobic008G170500 Sobic003G386800 Sobic003G386800 Sobic003G128700--Sobic003G386800 Sobic001G397100 Sobic001G397100 Sobic003G128700--Sobic001G397100 Sobic008G135500 Sobic008G135500 Sobic003G128700--Sobic008G135500 Sobic010G090100 Sobic010G090100 Sobic003G128700--Sobic010G090100 Sobic002G242300 Sobic002G242300 Sobic003G128700--Sobic002G242300 Sobic008G034300 Sobic008G034300 Sobic003G128700--Sobic008G034300 Sobic010G085000--Sobic009G042500 Sobic002G088800 Sobic002G088800 Sobic010G085000--Sobic002G088800 Sobic010G085000--Sobic003G375100 Sobic010G085000--Sobic003G276500 Sobic004G028400 Sobic004G028400 Sobic010G085000--Sobic004G028400 Sobic010G085000--Sobic001G200600 Sobic010G085000--Sobic002G136600 Sobic008G149200 Sobic008G149200 Sobic010G085000--Sobic008G149200 Sobic010G085000--Sobic004G250100 Sobic001G016500 Sobic001G016500 Sobic004G252100--Sobic001G016500 Sobic005G019700 Sobic005G019700 Sobic004G252100--Sobic005G019700 Sobic006G116700 Sobic006G116700 Sobic004G252100--Sobic006G116700 Sobic001G018900 Sobic001G018900 Sobic004G252100--Sobic001G018900 Sobic007G019000 Sobic007G019000 Sobic004G252100--Sobic007G019000 Sobic007G190800 Sobic007G190800 Sobic004G252100--Sobic007G190800 Sobic001G533500 Sobic001G533500 Sobic004G252100--Sobic001G533500 Sobic009G050300 Sobic009G050300 Sobic004G252100--Sobic009G050300 Sobic007G197800 Sobic007G197800 Sobic004G252100--Sobic007G197800
Octagon: transcription factors


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