Gene annotation
Transcriptome id Sobic.010G085000.1
Synonym Sb10g007350
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
expressed protein
UniProt A0A194YI02
Pfam PF13812 PF13041 PF12854 PF01535
Panther DB PTHR24015 PTHR24015:SF832
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G29230 : Tetratricopeptide repeat (TPR)-like superfamily protein
RAP-DB (Rice) LOC_Os06g11304.1 : expressed protein
MaizeGDB (Corn) Zm00025a001803 , Zm00025a049544
Brachypodium KQK18998
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G042500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
2 Sobic.002G088800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
3 Sobic.003G375100 snRK1-interacting protein 1, putative, expressed -
4 Sobic.003G276500 outer mitochondrial membrane porin, putative, expressed K15040: voltage-dependent anion channel protein 2
5 Sobic.004G028400 SWIB/MDM2 domain containing protein, expressed -
6 Sobic.001G200600 PPR repeat domain containing protein, putative, expressed -
7 Sobic.002G136600 expressed protein -
8 Sobic.008G149200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@vegetative storage protein, putative, expressed -
9 Sobic.004G250100 pentatricopeptide, putative, expressed -
10 Sobic.008G066900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
11 Sobic.007G024500 zinc finger family protein, putative, expressed -
12 Sobic.010G067000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
13 Sobic.002G385200 pentatricopeptide, putative, expressed -
14 Sobic.010G082850 - -
15 Sobic.005G172300 OsFBDUF60 - F-box and DUF domain containing protein, expressed -
16 Sobic.004G325300 transmembrane amino acid transporter protein, putative, expressed K15015: SLC32A, solute carrier family 32 (vesicular inhibitory amino acid transporter)
17 Sobic.001G105300 GA15368-PA, putative, expressed -
18 Sobic.010G066900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
19 Sobic.003G401400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@RNA recognition motif containing protein, putative, expressed -
20 Sobic.006G075450 - -


Gene co-expression network
sample Sobic010G085000 Sobic010G085000 Sobic009G042500 Sobic009G042500 Sobic010G085000--Sobic009G042500 Sobic002G088800 Sobic002G088800 Sobic010G085000--Sobic002G088800 Sobic003G375100 Sobic003G375100 Sobic010G085000--Sobic003G375100 Sobic003G276500 Sobic003G276500 Sobic010G085000--Sobic003G276500 Sobic004G028400 Sobic004G028400 Sobic010G085000--Sobic004G028400 Sobic001G200600 Sobic001G200600 Sobic010G085000--Sobic001G200600 Sobic002G136600 Sobic002G136600 Sobic010G085000--Sobic002G136600 Sobic008G149200 Sobic008G149200 Sobic010G085000--Sobic008G149200 Sobic004G250100 Sobic004G250100 Sobic010G085000--Sobic004G250100 Sobic003G202700 Sobic003G202700 Sobic009G042500--Sobic003G202700 Sobic009G042500--Sobic001G200600 Sobic003G433600 Sobic003G433600 Sobic009G042500--Sobic003G433600 Sobic006G266000 Sobic006G266000 Sobic009G042500--Sobic006G266000 Sobic001G226200 Sobic001G226200 Sobic009G042500--Sobic001G226200 Sobic010G067000 Sobic010G067000 Sobic009G042500--Sobic010G067000 Sobic009G042500--Sobic004G250100 Sobic010G066900 Sobic010G066900 Sobic009G042500--Sobic010G066900 Sobic002G292400 Sobic002G292400 Sobic009G042500--Sobic002G292400 Sobic002G385200 Sobic002G385200 Sobic002G088800--Sobic002G385200 Sobic005G210700 Sobic005G210700 Sobic002G088800--Sobic005G210700 Sobic001G001200 Sobic001G001200 Sobic002G088800--Sobic001G001200 Sobic003G051500 Sobic003G051500 Sobic002G088800--Sobic003G051500 Sobic005G011000 Sobic005G011000 Sobic002G088800--Sobic005G011000 Sobic003G128000 Sobic003G128000 Sobic002G088800--Sobic003G128000 Sobic006G099600 Sobic006G099600 Sobic002G088800--Sobic006G099600 Sobic001G240850 Sobic001G240850 Sobic002G088800--Sobic001G240850 Sobic002G088800--Sobic010G085000 Sobic003G375100--Sobic002G136600 Sobic003G375100--Sobic003G276500 Sobic010G054300 Sobic010G054300 Sobic003G375100--Sobic010G054300 Sobic010G082850 Sobic010G082850 Sobic003G375100--Sobic010G082850 Sobic004G252100 Sobic004G252100 Sobic003G375100--Sobic004G252100 Sobic002G074200 Sobic002G074200 Sobic003G375100--Sobic002G074200 Sobic003G289601 Sobic003G289601 Sobic003G375100--Sobic003G289601 Sobic003G310600 Sobic003G310600 Sobic003G375100--Sobic003G310600 Sobic001G162800 Sobic001G162800 Sobic003G375100--Sobic001G162800 Sobic003G276500--Sobic003G375100 Sobic003G276500--Sobic002G136600 Sobic010G101100 Sobic010G101100 Sobic003G276500--Sobic010G101100 Sobic003G125332 Sobic003G125332 Sobic003G276500--Sobic003G125332 Sobic003G276500--Sobic002G074200 Sobic003G276500--Sobic009G042500 Sobic001G296000 Sobic001G296000 Sobic003G276500--Sobic001G296000 Sobic009G080300 Sobic009G080300 Sobic003G276500--Sobic009G080300 Sobic003G276500--Sobic010G085000 Sobic004G311300 Sobic004G311300 Sobic004G028400--Sobic004G311300 Sobic003G401400 Sobic003G401400 Sobic004G028400--Sobic003G401400 Sobic002G328200 Sobic002G328200 Sobic004G028400--Sobic002G328200 Sobic004G028400--Sobic010G082850 Sobic004G325200 Sobic004G325200 Sobic004G028400--Sobic004G325200 Sobic003G358400 Sobic003G358400 Sobic004G028400--Sobic003G358400 Sobic004G028400--Sobic004G252100 Sobic001G081400 Sobic001G081400 Sobic004G028400--Sobic001G081400 Sobic006G108600 Sobic006G108600 Sobic004G028400--Sobic006G108600 Sobic001G200600--Sobic004G250100 Sobic001G200600--Sobic009G042500 Sobic001G200600--Sobic003G433600 Sobic007G179500 Sobic007G179500 Sobic001G200600--Sobic007G179500 Sobic010G092801 Sobic010G092801 Sobic001G200600--Sobic010G092801 Sobic003G203100 Sobic003G203100 Sobic001G200600--Sobic003G203100 Sobic001G490700 Sobic001G490700 Sobic001G200600--Sobic001G490700 Sobic001G200600--Sobic010G067000 Sobic008G041000 Sobic008G041000 Sobic001G200600--Sobic008G041000 Sobic002G136600--Sobic002G074200 Sobic002G136600--Sobic003G375100 Sobic004G170500 Sobic004G170500 Sobic002G136600--Sobic004G170500 Sobic002G136600--Sobic004G252100 Sobic001G529400 Sobic001G529400 Sobic002G136600--Sobic001G529400 Sobic002G136600--Sobic003G125332 Sobic002G136600--Sobic003G276500 Sobic007G195800 Sobic007G195800 Sobic002G136600--Sobic007G195800 Sobic002G136600--Sobic010G101100 Sobic002G084400 Sobic002G084400 Sobic008G149200--Sobic002G084400 Sobic010G232700 Sobic010G232700 Sobic008G149200--Sobic010G232700 Sobic001G347100 Sobic001G347100 Sobic008G149200--Sobic001G347100 Sobic008G165200 Sobic008G165200 Sobic008G149200--Sobic008G165200 Sobic008G163400 Sobic008G163400 Sobic008G149200--Sobic008G163400 Sobic008G149200--Sobic008G041000 Sobic009G063500 Sobic009G063500 Sobic008G149200--Sobic009G063500 Sobic006G085900 Sobic006G085900 Sobic008G149200--Sobic006G085900 Sobic001G149100 Sobic001G149100 Sobic008G149200--Sobic001G149100 Sobic004G250100--Sobic007G179500 Sobic004G250100--Sobic003G433600 Sobic004G250100--Sobic001G200600 Sobic003G213800 Sobic003G213800 Sobic004G250100--Sobic003G213800 Sobic010G143400 Sobic010G143400 Sobic004G250100--Sobic010G143400 Sobic004G250100--Sobic001G490700 Sobic008G178300 Sobic008G178300 Sobic004G250100--Sobic008G178300 Sobic004G250100--Sobic002G385200 Sobic001G527600 Sobic001G527600 Sobic004G250100--Sobic001G527600
Octagon: transcription factors


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