Gene annotation
Transcriptome id Sobic.001G108600.2,Sobic.001G108600.1,Sobic.001G108600.3
Synonym Sb01g009685
Functional annotation SEC14 cytosolic factor family protein, putative, expressed
UniProt A0A1B6QIF8 , A0A1Z5S580 , A0A1B6QID8
Pfam PF03765 PF00650
Panther DB PTHR10174 PTHR10174:SF149
NCBI CDD KOG1471; Phosphatidylinositol transfer protein SEC14 and related proteins KOG1470Phosphatidylinositol transfer protein PDR16 and related proteins
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G75170 : Sec14p-like phosphatidylinositol transfer family protein
RAP-DB (Rice) LOC_Os03g51430.1,LOC_Os03g51430.2 : SEC14 cytosolic factor family protein, putative, expressed
MaizeGDB (Corn) Zm00025a007950
Brachypodium KQK13459
Barley HORVU6Hr1G021650.1 , HORVU6Hr1G021650.2 , HORVU5Hr1G020290.1 , HORVU5Hr1G020290.2 , HORVU5Hr1G020290.3 , HORVU4Hr1G009210.5 , HORVU4Hr1G009210.7 , HORVU4Hr1G009210.2 , HORVU4Hr1G009210.3 , HORVU5Hr1G114590.3 , HORVU5Hr1G114590.2 , HORVU3Hr1G080050.1 , HORVU5Hr1G114590.1
Wheat TraesCS4D02G055200 , TraesCS4A02G259700 , TraesCS4D02G055100
Populus -


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cDNA sequences
Sobic.001G108600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G150300 Lg106, putative, expressed -
2 Sobic.008G113600 glutathione synthetase, chloroplast precursor, putative, expressed K01920: glutathione synthase
3 Sobic.003G169900 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase,chloroplast precursor, putative, expressed K13832: aroDE, 3-dehydroquinate dehydratase / shikimate dehydrogenase
4 Sobic.003G134800 coatomer subunit beta-1, putative, expressed K17301: COPB1, coatomer subunit beta
5 Sobic.006G252200 MEE34, putative, expressed K03038: PSMD7, 26S proteasome regulatory subunit N8
6 Sobic.003G143700 ATP-citrate synthase subunit 1, putative, expressed K01648: ATP citrate (pro-S)-lyase
7 Sobic.004G082900 26S protease regulatory subunit, putative, expressed K03064: PSMC6, 26S proteasome regulatory subunit T4
8 Sobic.004G010900 OsFBK2 - F-box domain and kelch repeat containing protein, expressed -
9 Sobic.001G281900 miro, putative, expressed K07977: Arf/Sar family, other
10 Sobic.001G458800 mitochondrial-processing peptidase subunit, mitochondrial precursor, putative, expressed K17732: PMPCB, mitochondrial-processing peptidase subunit beta
11 Sobic.001G338400 glycosyl transferase 8 domain containing protein, putative, expressed K13648: alpha-1,4-galacturonosyltransferase
12 Sobic.007G176200 26S proteasome non-ATPase regulatory subunit 3, putative, expressed K03033: PSMD3, 26S proteasome regulatory subunit N3
13 Sobic.001G109300 adenylyl cyclase-associated protein, putative, expressed K17261: CAP1_2, adenylyl cyclase-associated protein
14 Sobic.008G072200 coatomer subunit delta, putative, expressed -
15 Sobic.001G458700 26S protease regulatory subunit 6B, putative, expressed K03063: PSMC4, 26S proteasome regulatory subunit T3
16 Sobic.003G348800 NAD dependent epimerase/dehydratase family domain containing protein, expressed K08678: UXS1, UDP-glucuronate decarboxylase
17 Sobic.006G211800 coatomer subunit epsilon, putative, expressed K17268: coatomer subunit epsilon
18 Sobic.001G010700 proteasome subunit, putative, expressed K03035: PSMD12, 26S proteasome regulatory subunit N5
19 Sobic.004G213200 ribosomal protein S17, putative, expressed K02949: RP-S11e, small subunit ribosomal protein S11e
20 Sobic.001G096100 DNA-binding protein-related, putative, expressed K07466: RFA1, RPA1, replication factor A1


Gene co-expression network
sample Sobic001G108600 Sobic001G108600 Sobic008G150300 Sobic008G150300 Sobic001G108600--Sobic008G150300 Sobic008G113600 Sobic008G113600 Sobic001G108600--Sobic008G113600 Sobic003G169900 Sobic003G169900 Sobic001G108600--Sobic003G169900 Sobic003G134800 Sobic003G134800 Sobic001G108600--Sobic003G134800 Sobic006G252200 Sobic006G252200 Sobic001G108600--Sobic006G252200 Sobic003G143700 Sobic003G143700 Sobic001G108600--Sobic003G143700 Sobic004G082900 Sobic004G082900 Sobic001G108600--Sobic004G082900 Sobic004G010900 Sobic004G010900 Sobic001G108600--Sobic004G010900 Sobic001G281900 Sobic001G281900 Sobic001G108600--Sobic001G281900 Sobic003G170300 Sobic003G170300 Sobic008G150300--Sobic003G170300 Sobic008G150300--Sobic001G281900 Sobic001G338400 Sobic001G338400 Sobic008G150300--Sobic001G338400 Sobic001G458800 Sobic001G458800 Sobic008G150300--Sobic001G458800 Sobic007G161200 Sobic007G161200 Sobic008G150300--Sobic007G161200 Sobic002G410700 Sobic002G410700 Sobic008G150300--Sobic002G410700 Sobic005G105500 Sobic005G105500 Sobic008G150300--Sobic005G105500 Sobic007G159700 Sobic007G159700 Sobic008G150300--Sobic007G159700 Sobic006G211800 Sobic006G211800 Sobic008G150300--Sobic006G211800 Sobic009G139800 Sobic009G139800 Sobic008G113600--Sobic009G139800 Sobic008G113600--Sobic003G169900 Sobic002G375800 Sobic002G375800 Sobic008G113600--Sobic002G375800 Sobic001G220900 Sobic001G220900 Sobic008G113600--Sobic001G220900 Sobic008G113600--Sobic001G338400 Sobic007G075500 Sobic007G075500 Sobic008G113600--Sobic007G075500 Sobic003G348800 Sobic003G348800 Sobic008G113600--Sobic003G348800 Sobic001G077900 Sobic001G077900 Sobic008G113600--Sobic001G077900 Sobic001G109300 Sobic001G109300 Sobic008G113600--Sobic001G109300 Sobic003G169900--Sobic008G113600 Sobic003G169900--Sobic001G338400 Sobic003G169900--Sobic008G150300 Sobic003G169900--Sobic001G458800 Sobic003G169900--Sobic001G077900 Sobic003G196200 Sobic003G196200 Sobic003G169900--Sobic003G196200 Sobic008G072200 Sobic008G072200 Sobic003G169900--Sobic008G072200 Sobic001G458700 Sobic001G458700 Sobic003G169900--Sobic001G458700 Sobic003G169900--Sobic003G348800 Sobic002G070600 Sobic002G070600 Sobic003G134800--Sobic002G070600 Sobic003G134800--Sobic008G072200 Sobic002G141700 Sobic002G141700 Sobic003G134800--Sobic002G141700 Sobic010G178600 Sobic010G178600 Sobic003G134800--Sobic010G178600 Sobic001G117800 Sobic001G117800 Sobic003G134800--Sobic001G117800 Sobic002G423500 Sobic002G423500 Sobic003G134800--Sobic002G423500 Sobic003G134800--Sobic001G220900 Sobic001G151600 Sobic001G151600 Sobic003G134800--Sobic001G151600 Sobic003G134800--Sobic003G143700 Sobic007G176200 Sobic007G176200 Sobic006G252200--Sobic007G176200 Sobic006G252200--Sobic001G458700 Sobic004G224900 Sobic004G224900 Sobic006G252200--Sobic004G224900 Sobic001G010700 Sobic001G010700 Sobic006G252200--Sobic001G010700 Sobic003G330500 Sobic003G330500 Sobic006G252200--Sobic003G330500 Sobic002G428200 Sobic002G428200 Sobic006G252200--Sobic002G428200 Sobic004G138800 Sobic004G138800 Sobic006G252200--Sobic004G138800 Sobic001G283200 Sobic001G283200 Sobic006G252200--Sobic001G283200 Sobic001G096100 Sobic001G096100 Sobic006G252200--Sobic001G096100 Sobic003G143700--Sobic003G134800 Sobic002G313600 Sobic002G313600 Sobic003G143700--Sobic002G313600 Sobic003G143700--Sobic001G281900 Sobic003G143700--Sobic004G082900 Sobic007G044400 Sobic007G044400 Sobic003G143700--Sobic007G044400 Sobic003G143700--Sobic001G109300 Sobic002G177700 Sobic002G177700 Sobic003G143700--Sobic002G177700 Sobic001G196100 Sobic001G196100 Sobic003G143700--Sobic001G196100 Sobic003G143700--Sobic006G252200 Sobic004G082900--Sobic006G252200 Sobic004G082900--Sobic001G283200 Sobic004G082900--Sobic001G458700 Sobic004G082900--Sobic004G010900 Sobic004G082900--Sobic007G176200 Sobic004G082900--Sobic005G105500 Sobic001G145500 Sobic001G145500 Sobic004G082900--Sobic001G145500 Sobic009G149500 Sobic009G149500 Sobic004G082900--Sobic009G149500 Sobic001G444300 Sobic001G444300 Sobic004G082900--Sobic001G444300 Sobic001G206900 Sobic001G206900 Sobic004G010900--Sobic001G206900 Sobic004G010900--Sobic001G458700 Sobic004G010900--Sobic004G082900 Sobic004G010900--Sobic006G252200 Sobic010G205300 Sobic010G205300 Sobic004G010900--Sobic010G205300 Sobic003G261400 Sobic003G261400 Sobic004G010900--Sobic003G261400 Sobic004G010900--Sobic001G338400 Sobic004G010900--Sobic001G283200 Sobic003G349300 Sobic003G349300 Sobic004G010900--Sobic003G349300 Sobic001G281900--Sobic003G330500 Sobic001G281900--Sobic005G105500 Sobic001G281900--Sobic008G150300 Sobic001G281900--Sobic006G252200 Sobic001G281900--Sobic001G196100 Sobic001G281900--Sobic001G458700 Sobic001G281900--Sobic007G176200 Sobic001G281900--Sobic001G338400 Sobic001G281900--Sobic001G096100
Octagon: transcription factors


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